RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 ATAD2Q6PL18 1390 aa22.75■■□□□ 1.23
SMARCD1-201ENST00000381513 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
SMARCD1-201ENST00000381513 TULP2O00295 520 aa22.75■■□□□ 1.23
SMARCD1-201ENST00000381513 SRCIN1Q9C0H9 1055 aa22.74■■□□□ 1.23
SMARCD1-201ENST00000381513 ZNF215Q9UL58 517 aaPredicted RBP22.74■■□□□ 1.23
SMARCD1-201ENST00000381513 GTF3C6Q969F1 213 aa22.73■■□□□ 1.23
SMARCD1-201ENST00000381513 FEZ2Q9UHY8 353 aaPredicted RBP22.73■■□□□ 1.23
SMARCD1-201ENST00000381513 MCCP23508 829 aa22.73■■□□□ 1.23
SMARCD1-201ENST00000381513 CEP135Q66GS9 1140 aa22.73■■□□□ 1.23
SMARCD1-201ENST00000381513 TRIM5Q9C035 493 aa22.73■■□□□ 1.23
SMARCD1-201ENST00000381513 TMX1Q9H3N1 280 aa22.73■■□□□ 1.23
SMARCD1-201ENST00000381513 UBE2HP62256 183 aa22.72■■□□□ 1.23
SMARCD1-201ENST00000381513 ELF2Q15723 593 aa22.72■■□□□ 1.23
SMARCD1-201ENST00000381513 NRBP1Q9UHY1 535 aa22.72■■□□□ 1.23
SMARCD1-201ENST00000381513 CHMP4CQ96CF2 233 aa22.72■■□□□ 1.23
SMARCD1-201ENST00000381513 FBXO38Q6PIJ6 1188 aa22.72■■□□□ 1.23
SMARCD1-201ENST00000381513 RGS22Q8NE09 1264 aa22.71■■□□□ 1.23
SMARCD1-201ENST00000381513 ANO2Q9NQ90 1003 aa22.71■■□□□ 1.23
SMARCD1-201ENST00000381513 DISP1Q96F81 1524 aa22.71■■□□□ 1.23
SMARCD1-201ENST00000381513 CCDC192P0DO97 292 aa22.71■■□□□ 1.23
SMARCD1-201ENST00000381513 MYO5CQ9NQX4 1742 aa22.71■■□□□ 1.23
SMARCD1-201ENST00000381513 RAD51AP2Q09MP3 1159 aa22.7■■□□□ 1.22
SMARCD1-201ENST00000381513 RSPH14Q9UHP6 348 aa22.7■■□□□ 1.22
SMARCD1-201ENST00000381513 CUL4AQ13619 759 aa22.69■■□□□ 1.22
SMARCD1-201ENST00000381513 LUZP1Q86V48 1076 aa22.69■■□□□ 1.22
SMARCD1-201ENST00000381513 ERVK-7P63135 1459 aa22.69■■□□□ 1.22
SMARCD1-201ENST00000381513 SECISBP2LQ93073 1101 aaKnown RBP22.69■■□□□ 1.22
SMARCD1-201ENST00000381513 INTS4Q96HW7 963 aaKnown RBP22.69■■□□□ 1.22
SMARCD1-201ENST00000381513 DCTPP1Q9H773 170 aa22.69■■□□□ 1.22
SMARCD1-201ENST00000381513 TRAK1Q9UPV9 953 aa22.69■■□□□ 1.22
SMARCD1-201ENST00000381513 KDM5AP29375 1690 aaKnown RBP22.68■■□□□ 1.22
SMARCD1-201ENST00000381513 MYOM1P52179 1685 aa22.68■■□□□ 1.22
SMARCD1-201ENST00000381513 ZNF518AQ6AHZ1 1483 aa22.68■■□□□ 1.22
SMARCD1-201ENST00000381513 RBM6P78332 1123 aaKnown RBP22.68■■□□□ 1.22
SMARCD1-201ENST00000381513 PALD1Q9ULE6 856 aa22.68■■□□□ 1.22
SMARCD1-201ENST00000381513 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.68■■□□□ 1.22
SMARCD1-201ENST00000381513 VGFO15240 615 aaPredicted RBP22.68■■□□□ 1.22
SMARCD1-201ENST00000381513 CAMK4Q16566 473 aa22.67■■□□□ 1.22
SMARCD1-201ENST00000381513 TEX2Q8IWB9 1127 aa22.67■■□□□ 1.22
SMARCD1-201ENST00000381513 CDC42BPAQ5VT25 1732 aa22.67■■□□□ 1.22
SMARCD1-201ENST00000381513 KIAA0556O60303 1618 aa22.67■■□□□ 1.22
SMARCD1-201ENST00000381513 POLR3GO15318 223 aaPredicted RBP22.67■■□□□ 1.22
SMARCD1-201ENST00000381513 DTNBO60941 627 aa22.66■■□□□ 1.22
SMARCD1-201ENST00000381513 THUMPD2Q9BTF0 503 aaKnown RBP22.66■■□□□ 1.22
SMARCD1-201ENST00000381513 MRPL50Q8N5N7 158 aaKnown RBP22.66■■□□□ 1.22
SMARCD1-201ENST00000381513 TSPYL6Q8N831 410 aa22.66■■□□□ 1.22
SMARCD1-201ENST00000381513 NEK11Q8NG66 645 aa22.66■■□□□ 1.22
SMARCD1-201ENST00000381513 LARP6Q9BRS8 491 aaKnown RBP22.66■■□□□ 1.22
SMARCD1-201ENST00000381513 CD109Q6YHK3 1445 aa22.66■■□□□ 1.22
SMARCD1-201ENST00000381513 RNF17Q9BXT8 1623 aaKnown RBP22.65■■□□□ 1.22
SMARCD1-201ENST00000381513 CYP2C19P33261 490 aa22.65■■□□□ 1.22
SMARCD1-201ENST00000381513 ZSCAN25Q6NSZ9 544 aa22.65■■□□□ 1.22
SMARCD1-201ENST00000381513 PBRM1Q86U86 1689 aa22.65■■□□□ 1.22
SMARCD1-201ENST00000381513 IL16Q14005 1332 aa22.65■■□□□ 1.22
SMARCD1-201ENST00000381513 NCBP3Q53F19 620 aaKnown RBP22.65■■□□□ 1.22
SMARCD1-201ENST00000381513 PTPN14Q15678 1187 aa22.64■■□□□ 1.22
SMARCD1-201ENST00000381513 TSHZ3Q63HK5 1081 aa22.64■■□□□ 1.22
SMARCD1-201ENST00000381513 FAM200AQ8TCP9 573 aa22.64■■□□□ 1.22
SMARCD1-201ENST00000381513 TRMT1Q9NXH9 659 aaKnown RBP22.64■■□□□ 1.22
SMARCD1-201ENST00000381513 BMS1Q14692 1282 aaKnown RBP22.64■■□□□ 1.21
SMARCD1-201ENST00000381513 C10orf67Q8IYJ2 551 aa22.64■■□□□ 1.21
SMARCD1-201ENST00000381513 PLEKHF1Q96S99 279 aa22.64■■□□□ 1.21
SMARCD1-201ENST00000381513 SHPRHQ149N8 1683 aa22.63■■□□□ 1.21
SMARCD1-201ENST00000381513 HTATSF1O43719 755 aaKnown RBP22.63■■□□□ 1.21
SMARCD1-201ENST00000381513 FUCA2Q9BTY2 467 aa22.63■■□□□ 1.21
SMARCD1-201ENST00000381513 ZSCAN22P10073 491 aaPredicted RBP22.62■■□□□ 1.21
SMARCD1-201ENST00000381513 TEX35Q5T0J7 233 aa22.62■■□□□ 1.21
SMARCD1-201ENST00000381513 CKAP2LQ8IYA6 745 aa22.62■■□□□ 1.21
SMARCD1-201ENST00000381513 RILPL2Q969X0 211 aa22.62■■□□□ 1.21
SMARCD1-201ENST00000381513 RASSF4Q9H2L5 321 aa22.62■■□□□ 1.21
SMARCD1-201ENST00000381513 IQGAP1P46940 1657 aa22.62■■□□□ 1.21
SMARCD1-201ENST00000381513 VAMP4O75379 141 aa22.61■■□□□ 1.21
SMARCD1-201ENST00000381513 FBLN2P98095 1184 aa22.61■■□□□ 1.21
SMARCD1-201ENST00000381513 CLIP2Q9UDT6 1046 aa22.61■■□□□ 1.21
SMARCD1-201ENST00000381513 CACTINQ8WUQ7 758 aaKnown RBP22.61■■□□□ 1.21
SMARCD1-201ENST00000381513 ATP6V1DQ9Y5K8 247 aa22.61■■□□□ 1.21
SMARCD1-201ENST00000381513 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
SMARCD1-201ENST00000381513 DNM1Q05193 864 aaKnown RBP22.6■■□□□ 1.21
SMARCD1-201ENST00000381513 TMEM87AQ8NBN3 555 aa22.6■■□□□ 1.21
SMARCD1-201ENST00000381513 ERO1AQ96HE7 468 aa22.6■■□□□ 1.21
SMARCD1-201ENST00000381513 STX6O43752 255 aa22.59■■□□□ 1.21
SMARCD1-201ENST00000381513 ARHGAP45Q92619 1136 aa22.59■■□□□ 1.21
SMARCD1-201ENST00000381513 API5Q9BZZ5 524 aaKnown RBP22.59■■□□□ 1.21
SMARCD1-201ENST00000381513 GGNBP2Q9H3C7 697 aa22.59■■□□□ 1.21
SMARCD1-201ENST00000381513 CREBRFQ8IUR6 639 aa22.59■■□□□ 1.21
SMARCD1-201ENST00000381513 PTPRTO14522 1441 aa22.59■■□□□ 1.21
SMARCD1-201ENST00000381513 KRBA2Q6ZNG9 492 aa22.59■■□□□ 1.21
SMARCD1-201ENST00000381513 GTF2A1P52655 376 aaPredicted RBP22.58■■□□□ 1.21
SMARCD1-201ENST00000381513 ADGRF5Q8IZF2 1346 aa22.58■■□□□ 1.21
SMARCD1-201ENST00000381513 USP27XA6NNY8 438 aa22.58■■□□□ 1.2
SMARCD1-201ENST00000381513 TYRO3Q06418 890 aa22.58■■□□□ 1.2
SMARCD1-201ENST00000381513 MAP3K11Q16584 847 aa22.58■■□□□ 1.2
SMARCD1-201ENST00000381513 SMC3Q9UQE7 1217 aa22.58■■□□□ 1.2
SMARCD1-201ENST00000381513 MADDQ8WXG6 1647 aa22.58■■□□□ 1.2
SMARCD1-201ENST00000381513 SLU7O95391 586 aaKnown RBP22.57■■□□□ 1.2
SMARCD1-201ENST00000381513 CHGAP10645 457 aaKnown RBP22.57■■□□□ 1.2
SMARCD1-201ENST00000381513 SYT1P21579 422 aa22.57■■□□□ 1.2
SMARCD1-201ENST00000381513 SYT10Q6XYQ8 523 aa22.57■■□□□ 1.2
SMARCD1-201ENST00000381513 ZNF428Q96B54 188 aa22.57■■□□□ 1.2
SMARCD1-201ENST00000381513 ANO6Q4KMQ2 910 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms