RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 COL23A1Q86Y22 540 aaPredicted RBP24.82■■□□□ 1.56
HMGN1-203ENST00000380748 LTV1Q96GA3 475 aaPredicted RBP24.82■■□□□ 1.56
HMGN1-203ENST00000380748 FAM208AQ9UK61 1670 aaKnown RBP24.81■■□□□ 1.56
HMGN1-203ENST00000380748 MSL1Q68DK7 614 aa24.81■■□□□ 1.56
HMGN1-203ENST00000380748 CCNL1Q9UK58 526 aaPredicted RBP24.81■■□□□ 1.56
HMGN1-203ENST00000380748 IP6K1Q92551 441 aa24.79■■□□□ 1.56
HMGN1-203ENST00000380748 EDC4Q6P2E9 1401 aaKnown RBP24.78■■□□□ 1.56
HMGN1-203ENST00000380748 TMC1Q8TDI8 760 aa24.78■■□□□ 1.56
HMGN1-203ENST00000380748 GPBP1L1Q9HC44 474 aaPredicted RBP24.78■■□□□ 1.56
HMGN1-203ENST00000380748 ADCY9O60503 1353 aa24.77■■□□□ 1.56
HMGN1-203ENST00000380748 HDGFL2Q7Z4V5 671 aaPredicted RBP24.76■■□□□ 1.55
HMGN1-203ENST00000380748 SLC12A5Q9H2X9 1139 aa24.76■■□□□ 1.55
HMGN1-203ENST00000380748 HSPA6P17066 643 aa24.75■■□□□ 1.55
HMGN1-203ENST00000380748 ZNF526Q8TF50 670 aaPredicted RBP24.75■■□□□ 1.55
HMGN1-203ENST00000380748 MEGF6O75095 1541 aa24.75■■□□□ 1.55
HMGN1-203ENST00000380748 RGPD2P0DJD1 1756 aa24.74■■□□□ 1.55
HMGN1-203ENST00000380748 A0A1W2PP64 1363 aa24.73■■□□□ 1.55
HMGN1-203ENST00000380748 ZCRB1Q8TBF4 217 aaKnown RBP24.73■■□□□ 1.55
HMGN1-203ENST00000380748 USP47Q96K76 1375 aa24.72■■□□□ 1.55
HMGN1-203ENST00000380748 CD2APQ9Y5K6 639 aa24.72■■□□□ 1.55
HMGN1-203ENST00000380748 C5P01031 1676 aa24.72■■□□□ 1.55
HMGN1-203ENST00000380748 SIN3AQ96ST3 1273 aa24.71■■□□□ 1.55
HMGN1-203ENST00000380748 MAP3K19Q56UN5 1328 aa24.69■■□□□ 1.54
HMGN1-203ENST00000380748 HOXC9P31274 260 aa24.69■■□□□ 1.54
HMGN1-203ENST00000380748 TERF2IPQ9NYB0 399 aa24.68■■□□□ 1.54
HMGN1-203ENST00000380748 FBLN1P23142 703 aa24.67■■□□□ 1.54
HMGN1-203ENST00000380748 WWC3Q9ULE0 1092 aa24.66■■□□□ 1.54
HMGN1-203ENST00000380748 AMPHP49418 695 aa24.65■■□□□ 1.54
HMGN1-203ENST00000380748 NEUROD1Q13562 356 aa24.65■■□□□ 1.54
HMGN1-203ENST00000380748 TAF1LQ8IZX4 1826 aa24.65■■□□□ 1.54
HMGN1-203ENST00000380748 IGSF1Q8N6C5 1336 aa24.62■■□□□ 1.53
HMGN1-203ENST00000380748 AMIGO3Q86WK7 504 aa24.62■■□□□ 1.53
HMGN1-203ENST00000380748 USHBP1Q8N6Y0 703 aa24.62■■□□□ 1.53
HMGN1-203ENST00000380748 FLAD1Q8NFF5 587 aa24.62■■□□□ 1.53
HMGN1-203ENST00000380748 TOGARAM1Q9Y4F4 1720 aa24.61■■□□□ 1.53
HMGN1-203ENST00000380748 NBPF6Q5VWK0 638 aa24.61■■□□□ 1.53
HMGN1-203ENST00000380748 COG3Q96JB2 828 aa24.61■■□□□ 1.53
HMGN1-203ENST00000380748 NBPF4Q96M43 638 aa24.61■■□□□ 1.53
HMGN1-203ENST00000380748 CARD11Q9BXL7 1154 aa24.61■■□□□ 1.53
HMGN1-203ENST00000380748 PALLDQ8WX93 1383 aa24.61■■□□□ 1.53
HMGN1-203ENST00000380748 KIF3CO14782 793 aa24.6■■□□□ 1.53
HMGN1-203ENST00000380748 C4BP0C0L5 1744 aa24.6■■□□□ 1.53
HMGN1-203ENST00000380748 SMIM5Q71RC9 77 aa24.58■■□□□ 1.53
HMGN1-203ENST00000380748 CGNL1Q0VF96 1302 aa24.58■■□□□ 1.52
HMGN1-203ENST00000380748 RTL1A6NKG5 1358 aa24.57■■□□□ 1.52
HMGN1-203ENST00000380748 RAPGEF4Q8WZA2 1011 aa24.57■■□□□ 1.52
HMGN1-203ENST00000380748 PHF14O94880 888 aa24.56■■□□□ 1.52
HMGN1-203ENST00000380748 RRS1Q15050 365 aaKnown RBP24.56■■□□□ 1.52
HMGN1-203ENST00000380748 AK7Q96M32 723 aa24.56■■□□□ 1.52
HMGN1-203ENST00000380748 UBR3Q6ZT12 1888 aa24.55■■□□□ 1.52
HMGN1-203ENST00000380748 MPRIPQ6WCQ1 1025 aa24.55■■□□□ 1.52
HMGN1-203ENST00000380748 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
HMGN1-203ENST00000380748 PUS7Q96PZ0 661 aaKnown RBP24.54■■□□□ 1.52
HMGN1-203ENST00000380748 PCDH11XQ9BZA7 1347 aa24.54■■□□□ 1.52
HMGN1-203ENST00000380748 PCDH11YQ9BZA8 1340 aa24.54■■□□□ 1.52
HMGN1-203ENST00000380748 CICQ96RK0 1608 aaPredicted RBP24.53■■□□□ 1.52
HMGN1-203ENST00000380748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.52■■□□□ 1.52
HMGN1-203ENST00000380748 HMGB2P26583 209 aaKnown RBP24.52■■□□□ 1.52
HMGN1-203ENST00000380748 SMG6Q86US8 1419 aaKnown RBP24.52■■□□□ 1.52
HMGN1-203ENST00000380748 ITGB4P16144 1822 aa24.51■■□□□ 1.51
HMGN1-203ENST00000380748 APLP1P51693 650 aa24.5■■□□□ 1.51
HMGN1-203ENST00000380748 CYP27B1O15528 508 aa24.49■■□□□ 1.51
HMGN1-203ENST00000380748 NSD3Q9BZ95 1437 aa24.49■■□□□ 1.51
HMGN1-203ENST00000380748 SMARCC1Q92922 1105 aaPredicted RBP24.48■■□□□ 1.51
HMGN1-203ENST00000380748 DNAJC5GQ8N7S2 189 aa24.47■■□□□ 1.51
HMGN1-203ENST00000380748 SSFA2P28290 1259 aa24.46■■□□□ 1.51
HMGN1-203ENST00000380748 HSP90AB2PQ58FF8 381 aa24.46■■□□□ 1.51
HMGN1-203ENST00000380748 LINC00116Q8NCU8 138 aa24.46■■□□□ 1.51
HMGN1-203ENST00000380748 PIGBQ92521 554 aa24.46■■□□□ 1.51
HMGN1-203ENST00000380748 MAP2P11137 1827 aaKnown RBP24.46■■□□□ 1.51
HMGN1-203ENST00000380748 TESK2Q96S53 571 aa24.45■■□□□ 1.5
HMGN1-203ENST00000380748 GGNBP2Q9H3C7 697 aa24.45■■□□□ 1.5
HMGN1-203ENST00000380748 PXDNLA1KZ92 1463 aa24.45■■□□□ 1.5
HMGN1-203ENST00000380748 PKD1L3Q7Z443 1732 aa24.44■■□□□ 1.5
HMGN1-203ENST00000380748 KIAA1551Q9HCM1 1747 aa24.44■■□□□ 1.5
HMGN1-203ENST00000380748 INSRP06213 1382 aa24.43■■□□□ 1.5
HMGN1-203ENST00000380748 FYB1O15117 783 aa24.43■■□□□ 1.5
HMGN1-203ENST00000380748 TOMM70O94826 608 aa24.43■■□□□ 1.5
HMGN1-203ENST00000380748 LOC102724428A0A0B4J2F2 783 aa24.42■■□□□ 1.5
HMGN1-203ENST00000380748 SIK1P57059 783 aa24.42■■□□□ 1.5
HMGN1-203ENST00000380748 KIF13BQ9NQT8 1826 aa24.41■■□□□ 1.5
HMGN1-203ENST00000380748 MMP10P09238 476 aa24.41■■□□□ 1.5
HMGN1-203ENST00000380748 N4BP2Q86UW6 1770 aaPredicted RBP24.41■■□□□ 1.5
HMGN1-203ENST00000380748 GNPATO15228 680 aa24.4■■□□□ 1.5
HMGN1-203ENST00000380748 NMRK2Q9NPI5 230 aa24.4■■□□□ 1.5
HMGN1-203ENST00000380748 FLT4P35916 1363 aa24.4■■□□□ 1.5
HMGN1-203ENST00000380748 ST20-MTHFSA0A0A6YYL1 179 aa24.39■■□□□ 1.49
HMGN1-203ENST00000380748 ITPK1Q13572 414 aa24.39■■□□□ 1.49
HMGN1-203ENST00000380748 WDR90Q96KV7 1748 aa24.38■■□□□ 1.49
HMGN1-203ENST00000380748 BCS1LQ9Y276 419 aa24.38■■□□□ 1.49
HMGN1-203ENST00000380748 A0A0G2JLW4 131 aa24.36■■□□□ 1.49
HMGN1-203ENST00000380748 NKX1-1Q15270 411 aaPredicted RBP24.36■■□□□ 1.49
HMGN1-203ENST00000380748 ASAP1Q9ULH1 1129 aa24.36■■□□□ 1.49
HMGN1-203ENST00000380748 HTRA3P83110 453 aa24.35■■□□□ 1.49
HMGN1-203ENST00000380748 ARHGAP27Q6ZUM4 889 aa24.35■■□□□ 1.49
HMGN1-203ENST00000380748 KIF20BQ96Q89 1820 aa24.35■■□□□ 1.49
HMGN1-203ENST00000380748 C10orf71Q711Q0 1435 aa24.35■■□□□ 1.49
HMGN1-203ENST00000380748 KIF24Q5T7B8 1368 aa24.34■■□□□ 1.49
HMGN1-203ENST00000380748 TMOD3Q9NYL9 352 aa24.34■■□□□ 1.49
HMGN1-203ENST00000380748 ATP6V1AP38606 617 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms