RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 UTRNP46939 3433 aa23.49■■□□□ 1.35
SMN2-201ENST00000380741 SYTL4Q96C24 671 aaPredicted RBP23.49■■□□□ 1.35
SMN2-201ENST00000380741 CARD14Q9BXL6 1004 aa23.49■■□□□ 1.35
SMN2-201ENST00000380741 MTFR1LQ9H019 292 aa23.49■■□□□ 1.35
SMN2-201ENST00000380741 NSD3Q9BZ95 1437 aa23.49■■□□□ 1.35
SMN2-201ENST00000380741 LY75O60449 1722 aa23.48■■□□□ 1.35
SMN2-201ENST00000380741 HSP90AB2PQ58FF8 381 aa23.48■■□□□ 1.35
SMN2-201ENST00000380741 PCGF6Q9BYE7 350 aa23.48■■□□□ 1.35
SMN2-201ENST00000380741 CLSPNQ9HAW4 1339 aa23.48■■□□□ 1.35
SMN2-201ENST00000380741 FLT4P35916 1363 aa23.48■■□□□ 1.35
SMN2-201ENST00000380741 PRIM1P49642 420 aaKnown RBP23.47■■□□□ 1.35
SMN2-201ENST00000380741 NSD2O96028 1365 aa23.47■■□□□ 1.35
SMN2-201ENST00000380741 INSRP06213 1382 aa23.47■■□□□ 1.35
SMN2-201ENST00000380741 QSER1Q2KHR3 1735 aa23.47■■□□□ 1.35
SMN2-201ENST00000380741 KIF24Q5T7B8 1368 aa23.46■■□□□ 1.35
SMN2-201ENST00000380741 SGIP1Q9BQI5 828 aa23.46■■□□□ 1.35
SMN2-201ENST00000380741 CGNL1Q0VF96 1302 aa23.45■■□□□ 1.34
SMN2-201ENST00000380741 DCAF8L1A6NGE4 600 aa23.45■■□□□ 1.34
SMN2-201ENST00000380741 SLC27A3Q5K4L6 730 aa23.45■■□□□ 1.34
SMN2-201ENST00000380741 TUBGCP6Q96RT7 1819 aa23.45■■□□□ 1.34
SMN2-201ENST00000380741 RAPGEF4Q8WZA2 1011 aa23.44■■□□□ 1.34
SMN2-201ENST00000380741 AKT1S1Q96B36 256 aa23.44■■□□□ 1.34
SMN2-201ENST00000380741 ANKRD26Q9UPS8 1709 aa23.43■■□□□ 1.34
SMN2-201ENST00000380741 YY1P25490 414 aa23.43■■□□□ 1.34
SMN2-201ENST00000380741 KCNQ4P56696 695 aa23.42■■□□□ 1.34
SMN2-201ENST00000380741 FHDC1Q9C0D6 1143 aaPredicted RBP23.42■■□□□ 1.34
SMN2-201ENST00000380741 EMILIN1Q9Y6C2 1016 aa23.42■■□□□ 1.34
SMN2-201ENST00000380741 TATP17735 454 aaPredicted RBP23.41■■□□□ 1.34
SMN2-201ENST00000380741 SYT17Q9BSW7 474 aa23.4■■□□□ 1.34
SMN2-201ENST00000380741 MAP2P11137 1827 aaKnown RBP23.39■■□□□ 1.33
SMN2-201ENST00000380741 PKD1L3Q7Z443 1732 aa23.38■■□□□ 1.33
SMN2-201ENST00000380741 PNPLA7Q6ZV29 1317 aa23.37■■□□□ 1.33
SMN2-201ENST00000380741 PCDH11XQ9BZA7 1347 aa23.37■■□□□ 1.33
SMN2-201ENST00000380741 PCDH11YQ9BZA8 1340 aa23.37■■□□□ 1.33
SMN2-201ENST00000380741 ARXQ96QS3 562 aa23.37■■□□□ 1.33
SMN2-201ENST00000380741 COL24A1Q17RW2 1714 aa23.36■■□□□ 1.33
SMN2-201ENST00000380741 TOGARAM1Q9Y4F4 1720 aa23.36■■□□□ 1.33
SMN2-201ENST00000380741 PPM1GO15355 546 aaPredicted RBP23.36■■□□□ 1.33
SMN2-201ENST00000380741 TFCP2L1Q9NZI6 479 aa23.36■■□□□ 1.33
SMN2-201ENST00000380741 CCNL1Q9UK58 526 aaPredicted RBP23.36■■□□□ 1.33
SMN2-201ENST00000380741 NCAPD2Q15021 1401 aa23.35■■□□□ 1.33
SMN2-201ENST00000380741 POLR3GLQ9BT43 218 aa23.35■■□□□ 1.33
SMN2-201ENST00000380741 SLC16A10Q8TF71 515 aa23.34■■□□□ 1.33
SMN2-201ENST00000380741 ITGB4P16144 1822 aa23.33■■□□□ 1.33
SMN2-201ENST00000380741 C5P01031 1676 aa23.33■■□□□ 1.33
SMN2-201ENST00000380741 MAP3K5Q99683 1374 aa23.33■■□□□ 1.33
SMN2-201ENST00000380741 CYP27B1O15528 508 aa23.33■■□□□ 1.33
SMN2-201ENST00000380741 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.32
SMN2-201ENST00000380741 GOLGB1Q14789 3259 aaKnown RBP23.32■■□□□ 1.32
SMN2-201ENST00000380741 TAF1LQ8IZX4 1826 aa23.3■■□□□ 1.32
SMN2-201ENST00000380741 EIF4G2P78344 907 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMN2-201ENST00000380741 MPRIPQ6WCQ1 1025 aa23.29■■□□□ 1.32
SMN2-201ENST00000380741 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
SMN2-201ENST00000380741 PALLDQ8WX93 1383 aa23.28■■□□□ 1.32
SMN2-201ENST00000380741 HSPA5P11021 654 aaKnown RBP23.28■■□□□ 1.32
SMN2-201ENST00000380741 POLD1P28340 1107 aa23.28■■□□□ 1.32
SMN2-201ENST00000380741 EYA1Q99502 592 aa23.28■■□□□ 1.32
SMN2-201ENST00000380741 CHD4Q14839 1912 aa23.26■■□□□ 1.31
SMN2-201ENST00000380741 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
SMN2-201ENST00000380741 COL23A1Q86Y22 540 aaPredicted RBP23.25■■□□□ 1.31
SMN2-201ENST00000380741 KLHL34Q8N239 644 aa23.25■■□□□ 1.31
SMN2-201ENST00000380741 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
SMN2-201ENST00000380741 NKX1-1Q15270 411 aaPredicted RBP23.24■■□□□ 1.31
SMN2-201ENST00000380741 CCER1Q8TC90 406 aaPredicted RBP23.24■■□□□ 1.31
SMN2-201ENST00000380741 MSH5O43196 834 aa23.23■■□□□ 1.31
SMN2-201ENST00000380741 PANK3Q9H999 370 aa23.23■■□□□ 1.31
SMN2-201ENST00000380741 C4BP0C0L5 1744 aa23.22■■□□□ 1.31
SMN2-201ENST00000380741 EIF4A2Q14240 407 aaKnown RBP23.22■■□□□ 1.31
SMN2-201ENST00000380741 PIGBQ92521 554 aa23.21■■□□□ 1.31
SMN2-201ENST00000380741 SMARCC1Q92922 1105 aaPredicted RBP23.21■■□□□ 1.31
SMN2-201ENST00000380741 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMN2-201ENST00000380741 UBR3Q6ZT12 1888 aa23.18■■□□□ 1.3
SMN2-201ENST00000380741 HMGB2P26583 209 aaKnown RBP23.18■■□□□ 1.3
SMN2-201ENST00000380741 MSL1Q68DK7 614 aa23.18■■□□□ 1.3
SMN2-201ENST00000380741 PHKG2P15735 406 aa23.17■■□□□ 1.3
SMN2-201ENST00000380741 GPR162Q16538 588 aa23.17■■□□□ 1.3
SMN2-201ENST00000380741 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
SMN2-201ENST00000380741 NLGN2Q8NFZ4 835 aa23.17■■□□□ 1.3
SMN2-201ENST00000380741 IGSF1Q8N6C5 1336 aa23.16■■□□□ 1.3
SMN2-201ENST00000380741 ZNF784Q8NCA9 323 aaPredicted RBP23.16■■□□□ 1.3
SMN2-201ENST00000380741 FLAD1Q8NFF5 587 aa23.16■■□□□ 1.3
SMN2-201ENST00000380741 TMOD3Q9NYL9 352 aa23.16■■□□□ 1.3
SMN2-201ENST00000380741 PLEKHG2Q9H7P9 1386 aa23.15■■□□□ 1.3
SMN2-201ENST00000380741 AK7Q96M32 723 aa23.15■■□□□ 1.3
SMN2-201ENST00000380741 AMIGO3Q86WK7 504 aa23.14■■□□□ 1.29
SMN2-201ENST00000380741 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
SMN2-201ENST00000380741 SIK1P57059 783 aa23.13■■□□□ 1.29
SMN2-201ENST00000380741 PELP1Q8IZL8 1130 aaKnown RBP23.13■■□□□ 1.29
SMN2-201ENST00000380741 ASAP1Q9ULH1 1129 aa23.13■■□□□ 1.29
SMN2-201ENST00000380741 LINC00116Q8NCU8 138 aa23.12■■□□□ 1.29
SMN2-201ENST00000380741 MORC1Q86VD1 984 aa23.11■■□□□ 1.29
SMN2-201ENST00000380741 PHF14O94880 888 aa23.1■■□□□ 1.29
SMN2-201ENST00000380741 SMIM5Q71RC9 77 aa23.1■■□□□ 1.29
SMN2-201ENST00000380741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.09■■□□□ 1.29
SMN2-201ENST00000380741 ITPK1Q13572 414 aa23.09■■□□□ 1.29
SMN2-201ENST00000380741 ATG3Q9NT62 314 aa23.09■■□□□ 1.29
SMN2-201ENST00000380741 KNSTRNQ9Y448 316 aa23.08■■□□□ 1.29
SMN2-201ENST00000380741 SSFA2P28290 1259 aa23.07■■□□□ 1.28
SMN2-201ENST00000380741 ATP6V1AP38606 617 aa23.07■■□□□ 1.28
SMN2-201ENST00000380741 YBX3P16989 372 aaKnown RBP eCLIP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms