RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 GNAT3A8MTJ3 354 aa18.93■□□□□ 0.62
COL2A1-202ENST00000380518 RAPGEF3O95398 923 aa18.93■□□□□ 0.62
COL2A1-202ENST00000380518 EXOC6BQ9Y2D4 811 aa18.93■□□□□ 0.62
COL2A1-202ENST00000380518 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
COL2A1-202ENST00000380518 KIF1BPQ96EK5 621 aa18.93■□□□□ 0.62
COL2A1-202ENST00000380518 PRDM11Q9NQV5 511 aa18.93■□□□□ 0.62
COL2A1-202ENST00000380518 TOPBP1Q92547 1522 aa18.93■□□□□ 0.62
COL2A1-202ENST00000380518 SOGA3Q5TF21 947 aa18.93■□□□□ 0.62
COL2A1-202ENST00000380518 ABCC11Q96J66 1382 aa18.92■□□□□ 0.62
COL2A1-202ENST00000380518 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.92■□□□□ 0.62
COL2A1-202ENST00000380518 ALDH1L2Q3SY69 923 aa18.92■□□□□ 0.62
COL2A1-202ENST00000380518 ANKLE2Q86XL3 938 aa18.92■□□□□ 0.62
COL2A1-202ENST00000380518 POLA1P09884 1462 aaPredicted RBP18.92■□□□□ 0.62
COL2A1-202ENST00000380518 UBAC1Q9BSL1 405 aa18.92■□□□□ 0.62
COL2A1-202ENST00000380518 SUPT6HQ7KZ85 1726 aaKnown RBP18.91■□□□□ 0.62
COL2A1-202ENST00000380518 GLRX3O76003 335 aaKnown RBP18.91■□□□□ 0.62
COL2A1-202ENST00000380518 RARSP54136 660 aaKnown RBP18.91■□□□□ 0.62
COL2A1-202ENST00000380518 DUSP27Q5VZP5 1158 aa18.91■□□□□ 0.62
COL2A1-202ENST00000380518 ATP2B2Q01814 1243 aa18.91■□□□□ 0.62
COL2A1-202ENST00000380518 TXLNBQ8N3L3 684 aa18.91■□□□□ 0.62
COL2A1-202ENST00000380518 IL27Q8NEV9 243 aa18.91■□□□□ 0.62
COL2A1-202ENST00000380518 ESPNB1AK53 854 aa18.91■□□□□ 0.62
COL2A1-202ENST00000380518 AXDND1Q5T1B0 1012 aaPredicted RBP18.91■□□□□ 0.62
COL2A1-202ENST00000380518 TDO2P48775 406 aa18.91■□□□□ 0.62
COL2A1-202ENST00000380518 MPNDQ8N594 471 aa18.91■□□□□ 0.62
COL2A1-202ENST00000380518 SSH1Q8WYL5 1049 aa18.9■□□□□ 0.62
COL2A1-202ENST00000380518 MX1P20591 662 aa18.9■□□□□ 0.62
COL2A1-202ENST00000380518 STK11IPQ8N1F8 1099 aa18.9■□□□□ 0.62
COL2A1-202ENST00000380518 DEF6Q9H4E7 631 aa18.9■□□□□ 0.62
COL2A1-202ENST00000380518 RAB11FIP3O75154 756 aa18.9■□□□□ 0.62
COL2A1-202ENST00000380518 UPF3BQ9BZI7 483 aaKnown RBP18.89■□□□□ 0.61
COL2A1-202ENST00000380518 NUTM1Q86Y26 1132 aa18.89■□□□□ 0.61
COL2A1-202ENST00000380518 WASF1Q92558 559 aa18.89■□□□□ 0.61
COL2A1-202ENST00000380518 CASTP20810 708 aaKnown RBP18.89■□□□□ 0.61
COL2A1-202ENST00000380518 THUMPD2Q9BTF0 503 aaKnown RBP18.89■□□□□ 0.61
COL2A1-202ENST00000380518 KCNH5Q8NCM2 988 aa18.89■□□□□ 0.61
COL2A1-202ENST00000380518 RBM10P98175 930 aaKnown RBP18.88■□□□□ 0.61
COL2A1-202ENST00000380518 CCDC191Q8NCU4 936 aa18.88■□□□□ 0.61
COL2A1-202ENST00000380518 NESP48681 1621 aa18.88■□□□□ 0.61
COL2A1-202ENST00000380518 LEKR1Q6ZMV7 388 aa18.88■□□□□ 0.61
COL2A1-202ENST00000380518 EPRSP07814 1512 aaKnown RBP18.88■□□□□ 0.61
COL2A1-202ENST00000380518 ERLIN2O94905 339 aa18.88■□□□□ 0.61
COL2A1-202ENST00000380518 IMMTQ16891 758 aaKnown RBP18.88■□□□□ 0.61
COL2A1-202ENST00000380518 TMEM132AQ24JP5 1023 aa18.88■□□□□ 0.61
COL2A1-202ENST00000380518 MAP3K11Q16584 847 aa18.87■□□□□ 0.61
COL2A1-202ENST00000380518 ERLIN1O75477 346 aa18.87■□□□□ 0.61
COL2A1-202ENST00000380518 FILIP1Q7Z7B0 1213 aa18.87■□□□□ 0.61
COL2A1-202ENST00000380518 ZHX3Q9H4I2 956 aa18.87■□□□□ 0.61
COL2A1-202ENST00000380518 SMTNL1A8MU46 457 aa18.87■□□□□ 0.61
COL2A1-202ENST00000380518 BMP2KQ9NSY1 1161 aaPredicted RBP18.87■□□□□ 0.61
COL2A1-202ENST00000380518 CCDC141Q6ZP82 1450 aa18.87■□□□□ 0.61
COL2A1-202ENST00000380518 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
COL2A1-202ENST00000380518 MCM10Q7L590 875 aa18.86■□□□□ 0.61
COL2A1-202ENST00000380518 TANGO6Q9C0B7 1094 aa18.86■□□□□ 0.61
COL2A1-202ENST00000380518 CCDC181Q5TID7 509 aa18.86■□□□□ 0.61
COL2A1-202ENST00000380518 IDH1O75874 414 aaKnown RBP18.86■□□□□ 0.61
COL2A1-202ENST00000380518 RAI14Q9P0K7 980 aa18.86■□□□□ 0.61
COL2A1-202ENST00000380518 U3KPZ7 1027 aaPredicted RBP18.85■□□□□ 0.61
COL2A1-202ENST00000380518 LRP2BPQ9P2M1 347 aa18.85■□□□□ 0.61
COL2A1-202ENST00000380518 FBXO3Q9UK99 471 aa18.85■□□□□ 0.61
COL2A1-202ENST00000380518 NKTRP30414 1462 aaKnown RBP18.85■□□□□ 0.61
COL2A1-202ENST00000380518 PDCL3Q9H2J4 239 aa18.85■□□□□ 0.61
COL2A1-202ENST00000380518 LARP1Q6PKG0 1096 aaKnown RBP18.85■□□□□ 0.61
COL2A1-202ENST00000380518 MIS18AQ9NYP9 233 aa18.85■□□□□ 0.61
COL2A1-202ENST00000380518 AIDAQ96BJ3 306 aa18.84■□□□□ 0.61
COL2A1-202ENST00000380518 DDX11Q96FC9 970 aa18.84■□□□□ 0.61
COL2A1-202ENST00000380518 TSPYL1Q9H0U9 437 aa18.84■□□□□ 0.61
COL2A1-202ENST00000380518 GOLGA6L10A6NI86 522 aa18.84■□□□□ 0.61
COL2A1-202ENST00000380518 SKIDA1Q1XH10 827 aa18.84■□□□□ 0.61
COL2A1-202ENST00000380518 FAM177A1Q8N128 213 aaPredicted RBP18.84■□□□□ 0.61
COL2A1-202ENST00000380518 KIAA0586Q9BVV6 1533 aa18.84■□□□□ 0.61
COL2A1-202ENST00000380518 C20orf194Q5TEA3 1177 aa18.83■□□□□ 0.61
COL2A1-202ENST00000380518 SYCE3A1L190 88 aa18.83■□□□□ 0.61
COL2A1-202ENST00000380518 IGHMBP2P38935 993 aaKnown RBP18.83■□□□□ 0.61
COL2A1-202ENST00000380518 FERMT3Q86UX7 667 aa18.83■□□□□ 0.6
COL2A1-202ENST00000380518 ZSCAN30Q86W11 494 aa18.83■□□□□ 0.6
COL2A1-202ENST00000380518 CDK13Q14004 1512 aaKnown RBP18.83■□□□□ 0.6
COL2A1-202ENST00000380518 C11orf95C9JLR9 678 aaPredicted RBP18.83■□□□□ 0.6
COL2A1-202ENST00000380518 ZC3H6P61129 1189 aaKnown RBP18.83■□□□□ 0.6
COL2A1-202ENST00000380518 TAF7Q15545 349 aaPredicted RBP18.83■□□□□ 0.6
COL2A1-202ENST00000380518 WWC2Q6AWC2 1192 aa18.83■□□□□ 0.6
COL2A1-202ENST00000380518 AKAP2Q9Y2D5 859 aa18.83■□□□□ 0.6
COL2A1-202ENST00000380518 EIF3JO75822 258 aaKnown RBP18.82■□□□□ 0.6
COL2A1-202ENST00000380518 STARD3NLO95772 234 aa18.82■□□□□ 0.6
COL2A1-202ENST00000380518 CCDC83Q8IWF9 413 aa18.82■□□□□ 0.6
COL2A1-202ENST00000380518 SCAND2PQ9GZW5 306 aaPredicted RBP18.82■□□□□ 0.6
COL2A1-202ENST00000380518 PRPF40BQ6NWY9 871 aaKnown RBP18.82■□□□□ 0.6
COL2A1-202ENST00000380518 SH2B1Q9NRF2 756 aaPredicted RBP18.82■□□□□ 0.6
COL2A1-202ENST00000380518 UQCRHLA0A096LP55 91 aa18.82■□□□□ 0.6
COL2A1-202ENST00000380518 UQCRHP07919 91 aa18.82■□□□□ 0.6
COL2A1-202ENST00000380518 CEP131Q9UPN4 1083 aa18.82■□□□□ 0.6
COL2A1-202ENST00000380518 POGZQ7Z3K3 1410 aa18.82■□□□□ 0.6
COL2A1-202ENST00000380518 SMARCA5O60264 1052 aaPredicted RBP18.81■□□□□ 0.6
COL2A1-202ENST00000380518 SSBP05455 408 aaKnown RBP eCLIP18.81■□□□□ 0.6
COL2A1-202ENST00000380518 METTL24Q5JXM2 366 aa18.81■□□□□ 0.6
COL2A1-202ENST00000380518 WAPLQ7Z5K2 1190 aa18.8■□□□□ 0.6
COL2A1-202ENST00000380518 CCDC85AQ96PX6 553 aaPredicted RBP18.8■□□□□ 0.6
COL2A1-202ENST00000380518 LRPPRCP42704 1394 aaKnown RBP18.8■□□□□ 0.6
COL2A1-202ENST00000380518 IQCEQ6IPM2 695 aa18.8■□□□□ 0.6
COL2A1-202ENST00000380518 XPCQ01831 940 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms