RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 DMTNQ08495 405 aa15.26■□□□□ 0.03
PRPF40B-202ENST00000380281 ZSCAN20P17040 1043 aaPredicted RBP15.25■□□□□ 0.03
PRPF40B-202ENST00000380281 NEK4P51957 841 aa15.25■□□□□ 0.03
PRPF40B-202ENST00000380281 TERF1P54274 439 aa15.25■□□□□ 0.03
PRPF40B-202ENST00000380281 SNX21Q969T3 373 aa15.25■□□□□ 0.03
PRPF40B-202ENST00000380281 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-202ENST00000380281 EIF4A2Q14240 407 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-202ENST00000380281 UPF3BQ9BZI7 483 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-202ENST00000380281 CHMP4BQ9H444 224 aaKnown RBP15.24■□□□□ 0.03
PRPF40B-202ENST00000380281 CBX1P83916 185 aa15.24■□□□□ 0.03
PRPF40B-202ENST00000380281 TTC22Q5TAA0 569 aa15.24■□□□□ 0.03
PRPF40B-202ENST00000380281 GDPD2Q9HCC8 539 aa15.24■□□□□ 0.03
PRPF40B-202ENST00000380281 IL1RAPL2Q9NP60 686 aa15.24■□□□□ 0.03
PRPF40B-202ENST00000380281 SKOR2Q2VWA4 1001 aaPredicted RBP15.23■□□□□ 0.03
PRPF40B-202ENST00000380281 TSPYL4Q9UJ04 414 aa15.23■□□□□ 0.03
PRPF40B-202ENST00000380281 LRRC7Q96NW7 1537 aa15.23■□□□□ 0.03
PRPF40B-202ENST00000380281 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
PRPF40B-202ENST00000380281 CD163L1Q9NR16 1453 aa15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 FRMPD1Q5SYB0 1578 aa15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 ANO2Q9NQ90 1003 aa15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 DYNC1I1O14576 645 aa15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 DDIT3P35638 169 aa15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 FKBP5Q13451 457 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 CEP85Q6P2H3 762 aa15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 RTF1Q92541 710 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 RBM33Q96EV2 1170 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 PUS7Q96PZ0 661 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 DCTPP1Q9H773 170 aa15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 PPLO60437 1756 aa15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 INTS3Q68E01 1043 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 USP26Q9BXU7 913 aa15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 NOL7Q9UMY1 257 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-202ENST00000380281 SETBP1Q9Y6X0 1596 aa15.21■□□□□ 0.03
PRPF40B-202ENST00000380281 CASC1Q6TDU7 716 aa15.21■□□□□ 0.03
PRPF40B-202ENST00000380281 CCDC94Q9BW85 323 aaPredicted RBP15.21■□□□□ 0.03
PRPF40B-202ENST00000380281 ABCC4O15439 1325 aa15.21■□□□□ 0.03
PRPF40B-202ENST00000380281 LMOD3Q0VAK6 560 aa15.21■□□□□ 0.03
PRPF40B-202ENST00000380281 PPP4R3BQ5MIZ7 849 aa15.21■□□□□ 0.03
PRPF40B-202ENST00000380281 MSH6P52701 1360 aa15.21■□□□□ 0.03
PRPF40B-202ENST00000380281 COL3A1P02461 1466 aaPredicted RBP15.21■□□□□ 0.03
PRPF40B-202ENST00000380281 FAM177BA6PVY3 158 aa15.2■□□□□ 0.02
PRPF40B-202ENST00000380281 DDX54Q8TDD1 881 aaKnown RBP15.2■□□□□ 0.02
PRPF40B-202ENST00000380281 NSFL1CQ9UNZ2 370 aaKnown RBP15.2■□□□□ 0.02
PRPF40B-202ENST00000380281 NEXMIFQ5QGS0 1516 aa15.2■□□□□ 0.02
PRPF40B-202ENST00000380281 ARAP3Q8WWN8 1544 aa15.2■□□□□ 0.02
PRPF40B-202ENST00000380281 IGSF3O75054 1194 aa15.2■□□□□ 0.02
PRPF40B-202ENST00000380281 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
PRPF40B-202ENST00000380281 EIF2S2P20042 333 aaKnown RBP15.2■□□□□ 0.02
PRPF40B-202ENST00000380281 NAP1L2Q9ULW6 460 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-202ENST00000380281 ZNF500O60304 480 aaPredicted RBP15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 PLCB2Q00722 1185 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 MTERF4Q7Z6M4 381 aaKnown RBP15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 ARHGAP45Q92619 1136 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 PTPRMP28827 1452 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 METP08581 1390 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 SIGLEC1Q9BZZ2 1709 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 IFT172Q9UG01 1749 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 FAM135BQ49AJ0 1406 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 SYCE3A1L190 88 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 VGLL3A8MV65 326 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 ST18O60284 1047 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 RABEP1Q15276 862 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 USHBP1Q8N6Y0 703 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 ANKRD44Q8N8A2 993 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 RBSNQ9H1K0 784 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 PNPLA6Q8IY17 1366 aa15.19■□□□□ 0.02
PRPF40B-202ENST00000380281 AMPHP49418 695 aa15.18■□□□□ 0.02
PRPF40B-202ENST00000380281 UTP14CQ5TAP6 766 aaKnown RBP15.18■□□□□ 0.02
PRPF40B-202ENST00000380281 CIZ1Q9ULV3 898 aaPredicted RBP15.18■□□□□ 0.02
PRPF40B-202ENST00000380281 PRIM1P49642 420 aaKnown RBP15.18■□□□□ 0.02
PRPF40B-202ENST00000380281 MYO3AQ8NEV4 1616 aa15.18■□□□□ 0.02
PRPF40B-202ENST00000380281 ARHGEF28Q8N1W1 1705 aaKnown RBP15.18■□□□□ 0.02
PRPF40B-202ENST00000380281 CEBPAP49715 358 aaPredicted RBP15.18■□□□□ 0.02
PRPF40B-202ENST00000380281 NUTM1Q86Y26 1132 aa15.18■□□□□ 0.02
PRPF40B-202ENST00000380281 RIMS2Q9UQ26 1411 aa15.17■□□□□ 0.02
PRPF40B-202ENST00000380281 ANXA1P04083 346 aa15.17■□□□□ 0.02
PRPF40B-202ENST00000380281 ZC3H13Q5T200 1668 aaKnown RBP15.17■□□□□ 0.02
PRPF40B-202ENST00000380281 MLH3Q9UHC1 1453 aa15.17■□□□□ 0.02
PRPF40B-202ENST00000380281 SASS6Q6UVJ0 657 aa15.17■□□□□ 0.02
PRPF40B-202ENST00000380281 NGDNQ8NEJ9 315 aaKnown RBP15.17■□□□□ 0.02
PRPF40B-202ENST00000380281 PALD1Q9ULE6 856 aa15.17■□□□□ 0.02
PRPF40B-202ENST00000380281 ACEP12821 1306 aa15.17■□□□□ 0.02
PRPF40B-202ENST00000380281 PRR36Q9H6K5 1346 aa15.17■□□□□ 0.02
PRPF40B-202ENST00000380281 PDIA4P13667 645 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-202ENST00000380281 MTHFSDQ2M296 383 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-202ENST00000380281 ZKSCAN5Q9Y2L8 839 aa15.16■□□□□ 0.02
PRPF40B-202ENST00000380281 ZSCAN23Q3MJ62 389 aa15.16■□□□□ 0.02
PRPF40B-202ENST00000380281 DNTTIP2Q5QJE6 756 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-202ENST00000380281 PNMA6EA0A0J9YXQ4 647 aa15.16■□□□□ 0.02
PRPF40B-202ENST00000380281 ADGRB2O60241 1585 aa15.16■□□□□ 0.02
PRPF40B-202ENST00000380281 LMTK2Q8IWU2 1503 aa15.15■□□□□ 0.02
PRPF40B-202ENST00000380281 STK31Q9BXU1 1019 aa15.15■□□□□ 0.02
PRPF40B-202ENST00000380281 NCOA3Q9Y6Q9 1424 aa15.15■□□□□ 0.02
PRPF40B-202ENST00000380281 ZMYM3Q14202 1370 aa15.14■□□□□ 0.01
PRPF40B-202ENST00000380281 KLHL40Q2TBA0 621 aa15.14■□□□□ 0.01
PRPF40B-202ENST00000380281 MYO5BQ9ULV0 1848 aa15.14■□□□□ 0.01
PRPF40B-202ENST00000380281 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
PRPF40B-202ENST00000380281 ERC2O15083 957 aa15.14■□□□□ 0.01
PRPF40B-202ENST00000380281 ZBTB22O15209 634 aa15.14■□□□□ 0.01
PRPF40B-202ENST00000380281 PDE1AP54750 535 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms