RNA–Protein interactions for RNA: ENST00000379341.8

PRDX4-202, Transcript of peroxiredoxin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDX4, Length 1,005 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX4-202ENST00000379341 NUP188Q5SRE5 1749 aa29.78■■■□□ 2.36
PRDX4-202ENST00000379341 SHANK3Q9BYB0 1731 aa29.78■■■□□ 2.36
PRDX4-202ENST00000379341 PLSCR1O15162 318 aa29.77■■■□□ 2.36
PRDX4-202ENST00000379341 NCAPD2Q15021 1401 aa29.77■■■□□ 2.36
PRDX4-202ENST00000379341 KCNQ2O43526 872 aa29.76■■■□□ 2.35
PRDX4-202ENST00000379341 ACSBG1Q96GR2 724 aa29.76■■■□□ 2.35
PRDX4-202ENST00000379341 PER1O15534 1290 aaPredicted RBP29.75■■■□□ 2.35
PRDX4-202ENST00000379341 TATP17735 454 aaPredicted RBP29.75■■■□□ 2.35
PRDX4-202ENST00000379341 PSDA5PKW4 1024 aaPredicted RBP29.73■■■□□ 2.35
PRDX4-202ENST00000379341 EIF4A2Q14240 407 aaKnown RBP29.72■■■□□ 2.35
PRDX4-202ENST00000379341 EYA1Q99502 592 aa29.72■■■□□ 2.35
PRDX4-202ENST00000379341 R3HDM1Q15032 1099 aaKnown RBP29.7■■■□□ 2.35
PRDX4-202ENST00000379341 KAT6BQ8WYB5 2073 aa29.7■■■□□ 2.34
PRDX4-202ENST00000379341 BTAF1O14981 1849 aa29.68■■■□□ 2.34
PRDX4-202ENST00000379341 PKD1L3Q7Z443 1732 aa29.67■■■□□ 2.34
PRDX4-202ENST00000379341 DOT1LQ8TEK3 1739 aa29.67■■■□□ 2.34
PRDX4-202ENST00000379341 PCDH11XQ9BZA7 1347 aa29.67■■■□□ 2.34
PRDX4-202ENST00000379341 PCDH11YQ9BZA8 1340 aa29.67■■■□□ 2.34
PRDX4-202ENST00000379341 NBPF14Q5TI25 921 aa29.66■■■□□ 2.34
PRDX4-202ENST00000379341 CC2D1BQ5T0F9 858 aaKnown RBP29.65■■■□□ 2.34
PRDX4-202ENST00000379341 PROM2Q8N271 834 aa29.65■■■□□ 2.34
PRDX4-202ENST00000379341 NPC1L1Q9UHC9 1359 aa29.64■■■□□ 2.34
PRDX4-202ENST00000379341 TXNRD1Q16881 649 aa29.63■■■□□ 2.33
PRDX4-202ENST00000379341 IGSF1Q8N6C5 1336 aa29.63■■■□□ 2.33
PRDX4-202ENST00000379341 PRIM1P49642 420 aaKnown RBP29.61■■■□□ 2.33
PRDX4-202ENST00000379341 SYTL4Q96C24 671 aaPredicted RBP29.6■■■□□ 2.33
PRDX4-202ENST00000379341 CYP27B1O15528 508 aa29.59■■■□□ 2.33
PRDX4-202ENST00000379341 SPG7Q9UQ90 795 aa29.59■■■□□ 2.33
PRDX4-202ENST00000379341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.58■■■□□ 2.33
PRDX4-202ENST00000379341 LRP5O75197 1615 aa29.57■■■□□ 2.32
PRDX4-202ENST00000379341 PLEKHG2Q9H7P9 1386 aa29.57■■■□□ 2.32
PRDX4-202ENST00000379341 ANO8Q9HCE9 1232 aaPredicted RBP29.57■■■□□ 2.32
PRDX4-202ENST00000379341 MTHFSP49914 203 aa29.56■■■□□ 2.32
PRDX4-202ENST00000379341 IL13P35225 146 aa29.54■■■□□ 2.32
PRDX4-202ENST00000379341 CNGB1Q14028 1251 aaPredicted RBP29.54■■■□□ 2.32
PRDX4-202ENST00000379341 TOGARAM1Q9Y4F4 1720 aa29.52■■■□□ 2.32
PRDX4-202ENST00000379341 NKX1-1Q15270 411 aaPredicted RBP29.51■■■□□ 2.31
PRDX4-202ENST00000379341 PAPPAQ13219 1627 aa29.5■■■□□ 2.31
PRDX4-202ENST00000379341 AEBP1Q8IUX7 1158 aa29.49■■■□□ 2.31
PRDX4-202ENST00000379341 STK32BQ9NY57 414 aa29.49■■■□□ 2.31
PRDX4-202ENST00000379341 PHKG2P15735 406 aa29.48■■■□□ 2.31
PRDX4-202ENST00000379341 SLC27A3Q5K4L6 730 aa29.48■■■□□ 2.31
PRDX4-202ENST00000379341 IFNL2Q8IZJ0 200 aa29.48■■■□□ 2.31
PRDX4-202ENST00000379341 KDRP35968 1356 aa29.48■■■□□ 2.31
PRDX4-202ENST00000379341 LY75O60449 1722 aa29.48■■■□□ 2.31
PRDX4-202ENST00000379341 SULT6B1Q6IMI4 303 aa29.47■■■□□ 2.31
PRDX4-202ENST00000379341 LRRC4BQ9NT99 713 aa29.47■■■□□ 2.31
PRDX4-202ENST00000379341 ITGB4P16144 1822 aa29.46■■■□□ 2.31
PRDX4-202ENST00000379341 SLC15A2Q16348 729 aa29.46■■■□□ 2.31
PRDX4-202ENST00000379341 PLEKHO1Q53GL0 409 aaPredicted RBP29.45■■■□□ 2.31
PRDX4-202ENST00000379341 MPRIPQ6WCQ1 1025 aa29.45■■■□□ 2.31
PRDX4-202ENST00000379341 CASZ1Q86V15 1759 aa29.44■■■□□ 2.3
PRDX4-202ENST00000379341 DIAPH1O60610 1272 aaKnown RBP29.43■■■□□ 2.3
PRDX4-202ENST00000379341 AMOTQ4VCS5 1084 aa29.43■■■□□ 2.3
PRDX4-202ENST00000379341 COL3A1P02461 1466 aaPredicted RBP29.42■■■□□ 2.3
PRDX4-202ENST00000379341 ZNF530Q6P9A1 599 aaPredicted RBP29.4■■■□□ 2.3
PRDX4-202ENST00000379341 PIGBQ92521 554 aa29.39■■■□□ 2.3
PRDX4-202ENST00000379341 CCNL1Q9UK58 526 aaPredicted RBP29.39■■■□□ 2.3
PRDX4-202ENST00000379341 PALLDQ8WX93 1383 aa29.39■■■□□ 2.29
PRDX4-202ENST00000379341 KCNQ4P56696 695 aa29.38■■■□□ 2.29
PRDX4-202ENST00000379341 ZNF827Q17R98 1081 aa29.38■■■□□ 2.29
PRDX4-202ENST00000379341 PDGFDQ9GZP0 370 aaPredicted RBP29.38■■■□□ 2.29
PRDX4-202ENST00000379341 HSP90AB1P08238 724 aaKnown RBP29.37■■■□□ 2.29
PRDX4-202ENST00000379341 TMOD3Q9NYL9 352 aa29.37■■■□□ 2.29
PRDX4-202ENST00000379341 HMOX1P09601 288 aa29.36■■■□□ 2.29
PRDX4-202ENST00000379341 AKT1S1Q96B36 256 aa29.36■■■□□ 2.29
PRDX4-202ENST00000379341 SMARCC1Q92922 1105 aaPredicted RBP29.35■■■□□ 2.29
PRDX4-202ENST00000379341 DCAF5Q96JK2 942 aa29.35■■■□□ 2.29
PRDX4-202ENST00000379341 SPON1Q9HCB6 807 aa29.35■■■□□ 2.29
PRDX4-202ENST00000379341 C1orf141Q5JVX7 400 aa29.34■■■□□ 2.29
PRDX4-202ENST00000379341 PPP2R1AP30153 589 aa29.33■■■□□ 2.29
PRDX4-202ENST00000379341 KDM6AO15550 1401 aaPredicted RBP29.33■■■□□ 2.29
PRDX4-202ENST00000379341 ERVV-2B6SEH9 535 aa29.32■■■□□ 2.28
PRDX4-202ENST00000379341 CFAP53Q96M91 514 aa29.32■■■□□ 2.28
PRDX4-202ENST00000379341 QSER1Q2KHR3 1735 aa29.31■■■□□ 2.28
PRDX4-202ENST00000379341 C5P01031 1676 aa29.31■■■□□ 2.28
PRDX4-202ENST00000379341 U2SURPO15042 1029 aaKnown RBP29.3■■■□□ 2.28
PRDX4-202ENST00000379341 ZBTB7AO95365 584 aa29.3■■■□□ 2.28
PRDX4-202ENST00000379341 TFCP2L1Q9NZI6 479 aa29.28■■■□□ 2.28
PRDX4-202ENST00000379341 ASAP1Q9ULH1 1129 aa29.28■■■□□ 2.28
PRDX4-202ENST00000379341 TUBGCP6Q96RT7 1819 aa29.28■■■□□ 2.28
PRDX4-202ENST00000379341 HMGB2P26583 209 aaKnown RBP29.27■■■□□ 2.28
PRDX4-202ENST00000379341 TAF1LQ8IZX4 1826 aa29.27■■■□□ 2.28
PRDX4-202ENST00000379341 AKAP4Q5JQC9 854 aa29.26■■■□□ 2.27
PRDX4-202ENST00000379341 PNPLA7Q6ZV29 1317 aa29.25■■■□□ 2.27
PRDX4-202ENST00000379341 ZEB1P37275 1124 aaPredicted RBP29.25■■■□□ 2.27
PRDX4-202ENST00000379341 MTFR1LQ9H019 292 aa29.25■■■□□ 2.27
PRDX4-202ENST00000379341 ATG3Q9NT62 314 aa29.25■■■□□ 2.27
PRDX4-202ENST00000379341 LOC102724428A0A0B4J2F2 783 aa29.24■■■□□ 2.27
PRDX4-202ENST00000379341 SIK1P57059 783 aa29.24■■■□□ 2.27
PRDX4-202ENST00000379341 CABP4P57796 275 aa29.24■■■□□ 2.27
PRDX4-202ENST00000379341 PPP1R1BQ9UD71 204 aaPredicted RBP29.23■■■□□ 2.27
PRDX4-202ENST00000379341 ATF5Q9Y2D1 282 aaPredicted RBP29.23■■■□□ 2.27
PRDX4-202ENST00000379341 SCN11AQ9UI33 1791 aa29.23■■■□□ 2.27
PRDX4-202ENST00000379341 MTHFSDQ2M296 383 aaKnown RBP29.22■■■□□ 2.27
PRDX4-202ENST00000379341 NUDCQ9Y266 331 aa29.22■■■□□ 2.27
PRDX4-202ENST00000379341 PTGER2P43116 358 aa29.21■■■□□ 2.27
PRDX4-202ENST00000379341 DDX10Q13206 875 aaKnown RBP29.21■■■□□ 2.27
PRDX4-202ENST00000379341 C4BP0C0L5 1744 aa29.2■■■□□ 2.27
PRDX4-202ENST00000379341 SLC16A10Q8TF71 515 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms