RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SLIT3O75094 1523 aa24.86■■□□□ 1.57
SSU72-204ENST00000378726 TSPYL6Q8N831 410 aa24.85■■□□□ 1.57
SSU72-204ENST00000378726 ELL2O00472 640 aaPredicted RBP24.85■■□□□ 1.57
SSU72-204ENST00000378726 CHL1O00533 1208 aa24.84■■□□□ 1.57
SSU72-204ENST00000378726 NOB1Q9ULX3 412 aaKnown RBP24.84■■□□□ 1.57
SSU72-204ENST00000378726 C8orf58Q8NAV2 365 aa24.83■■□□□ 1.57
SSU72-204ENST00000378726 MS4A1P11836 297 aa24.82■■□□□ 1.56
SSU72-204ENST00000378726 ZC3H6P61129 1189 aaKnown RBP24.82■■□□□ 1.56
SSU72-204ENST00000378726 TWISTNBQ3B726 338 aaPredicted RBP24.82■■□□□ 1.56
SSU72-204ENST00000378726 DZIP1LQ8IYY4 767 aaKnown RBP24.82■■□□□ 1.56
SSU72-204ENST00000378726 XIRP1Q702N8 1843 aaKnown RBP24.81■■□□□ 1.56
SSU72-204ENST00000378726 BRINP3Q76B58 766 aa24.81■■□□□ 1.56
SSU72-204ENST00000378726 BACH2Q9BYV9 841 aa24.81■■□□□ 1.56
SSU72-204ENST00000378726 SLAIN2Q9P270 581 aa24.81■■□□□ 1.56
SSU72-204ENST00000378726 HTATSF1O43719 755 aaKnown RBP24.81■■□□□ 1.56
SSU72-204ENST00000378726 FTSJ3Q8IY81 847 aaKnown RBP24.81■■□□□ 1.56
SSU72-204ENST00000378726 LRRC59Q96AG4 307 aaKnown RBP24.81■■□□□ 1.56
SSU72-204ENST00000378726 ATF7IPQ6VMQ6 1270 aa24.8■■□□□ 1.56
SSU72-204ENST00000378726 AXIN2Q9Y2T1 843 aa24.8■■□□□ 1.56
SSU72-204ENST00000378726 GNAT3A8MTJ3 354 aa24.8■■□□□ 1.56
SSU72-204ENST00000378726 IPO8O15397 1037 aaKnown RBP24.8■■□□□ 1.56
SSU72-204ENST00000378726 TRIM27P14373 513 aa24.8■■□□□ 1.56
SSU72-204ENST00000378726 ANKRD24Q8TF21 1146 aa24.79■■□□□ 1.56
SSU72-204ENST00000378726 KDM2BQ8NHM5 1336 aa24.79■■□□□ 1.56
SSU72-204ENST00000378726 KIF16BQ96L93 1317 aa24.79■■□□□ 1.56
SSU72-204ENST00000378726 CRB1P82279 1406 aa24.78■■□□□ 1.56
SSU72-204ENST00000378726 BRPF1P55201 1214 aaPredicted RBP24.78■■□□□ 1.56
SSU72-204ENST00000378726 CENPQQ7L2Z9 268 aaPredicted RBP24.78■■□□□ 1.56
SSU72-204ENST00000378726 PHRF1Q9P1Y6 1649 aaKnown RBP24.78■■□□□ 1.56
SSU72-204ENST00000378726 ALS2Q96Q42 1657 aa24.78■■□□□ 1.56
SSU72-204ENST00000378726 SPATA31A3Q5VYP0 1347 aa24.77■■□□□ 1.56
SSU72-204ENST00000378726 AAMPQ13685 434 aa24.77■■□□□ 1.56
SSU72-204ENST00000378726 MVPQ14764 893 aaKnown RBP24.77■■□□□ 1.56
SSU72-204ENST00000378726 CABLES1Q8TDN4 633 aa24.77■■□□□ 1.56
SSU72-204ENST00000378726 MIS18AQ9NYP9 233 aa24.77■■□□□ 1.56
SSU72-204ENST00000378726 SKAP1Q86WV1 359 aa24.76■■□□□ 1.55
SSU72-204ENST00000378726 MRPL50Q8N5N7 158 aaKnown RBP24.76■■□□□ 1.55
SSU72-204ENST00000378726 MED1Q15648 1581 aaPredicted RBP24.75■■□□□ 1.55
SSU72-204ENST00000378726 TNS3Q68CZ2 1445 aa24.74■■□□□ 1.55
SSU72-204ENST00000378726 PXDNQ92626 1479 aa24.74■■□□□ 1.55
SSU72-204ENST00000378726 RTL5Q5HYW3 569 aaPredicted RBP24.74■■□□□ 1.55
SSU72-204ENST00000378726 IL17REQ8NFR9 667 aa24.73■■□□□ 1.55
SSU72-204ENST00000378726 KRT24Q2M2I5 525 aa24.73■■□□□ 1.55
SSU72-204ENST00000378726 TSPYL4Q9UJ04 414 aa24.73■■□□□ 1.55
SSU72-204ENST00000378726 MAP3K5Q99683 1374 aa24.72■■□□□ 1.55
SSU72-204ENST00000378726 HAP1P54257 671 aaPredicted RBP24.71■■□□□ 1.55
SSU72-204ENST00000378726 IGHDP01880 384 aa24.7■■□□□ 1.55
SSU72-204ENST00000378726 ARHGAP45Q92619 1136 aa24.7■■□□□ 1.55
SSU72-204ENST00000378726 KIAA0232Q92628 1395 aa24.7■■□□□ 1.55
SSU72-204ENST00000378726 PLEKHO1Q53GL0 409 aaPredicted RBP24.69■■□□□ 1.54
SSU72-204ENST00000378726 ITPRIPQ8IWB1 547 aa24.69■■□□□ 1.54
SSU72-204ENST00000378726 TMEM57Q8N5G2 664 aa24.69■■□□□ 1.54
SSU72-204ENST00000378726 DDX19BQ9UMR2 479 aa24.69■■□□□ 1.54
SSU72-204ENST00000378726 ERBB3P21860 1342 aa24.68■■□□□ 1.54
SSU72-204ENST00000378726 PCDHB15Q9Y5E8 787 aa24.68■■□□□ 1.54
SSU72-204ENST00000378726 SOS2Q07890 1332 aaPredicted RBP24.68■■□□□ 1.54
SSU72-204ENST00000378726 RGPD2P0DJD1 1756 aa24.67■■□□□ 1.54
SSU72-204ENST00000378726 AMOTQ4VCS5 1084 aa24.67■■□□□ 1.54
SSU72-204ENST00000378726 TAF7Q15545 349 aaPredicted RBP24.66■■□□□ 1.54
SSU72-204ENST00000378726 CHRNA2Q15822 529 aa24.65■■□□□ 1.54
SSU72-204ENST00000378726 NCAPD2Q15021 1401 aa24.65■■□□□ 1.54
SSU72-204ENST00000378726 ZNF530Q6P9A1 599 aaPredicted RBP24.64■■□□□ 1.54
SSU72-204ENST00000378726 AKAP4Q5JQC9 854 aa24.63■■□□□ 1.53
SSU72-204ENST00000378726 LGR6Q9HBX8 967 aa24.63■■□□□ 1.53
SSU72-204ENST00000378726 BABAM1Q9NWV8 329 aa24.63■■□□□ 1.53
SSU72-204ENST00000378726 NLRP2Q9NX02 1062 aa24.63■■□□□ 1.53
SSU72-204ENST00000378726 CSB-PGBD3P0DP91 1061 aa24.61■■□□□ 1.53
SSU72-204ENST00000378726 API5Q9BZZ5 524 aaKnown RBP24.61■■□□□ 1.53
SSU72-204ENST00000378726 RGPD5Q99666 1765 aa24.61■■□□□ 1.53
SSU72-204ENST00000378726 CEMIPQ8WUJ3 1361 aa24.6■■□□□ 1.53
SSU72-204ENST00000378726 RWDD1Q9H446 243 aaPredicted RBP24.6■■□□□ 1.53
SSU72-204ENST00000378726 C1orf141Q5JVX7 400 aa24.59■■□□□ 1.53
SSU72-204ENST00000378726 ZBTB40Q9NUA8 1239 aa24.59■■□□□ 1.53
SSU72-204ENST00000378726 CPDO75976 1380 aa24.59■■□□□ 1.53
SSU72-204ENST00000378726 MPRIPQ6WCQ1 1025 aa24.59■■□□□ 1.53
SSU72-204ENST00000378726 SLC4A2P04920 1241 aa24.58■■□□□ 1.52
SSU72-204ENST00000378726 RAPGEF4Q8WZA2 1011 aa24.58■■□□□ 1.52
SSU72-204ENST00000378726 LRRC37A3O60309 1634 aa24.57■■□□□ 1.52
SSU72-204ENST00000378726 ABCC4O15439 1325 aa24.57■■□□□ 1.52
SSU72-204ENST00000378726 COL18A1P39060 1754 aa24.56■■□□□ 1.52
SSU72-204ENST00000378726 ZBTB7BO15156 539 aaPredicted RBP24.55■■□□□ 1.52
SSU72-204ENST00000378726 TEFQ10587 303 aa24.55■■□□□ 1.52
SSU72-204ENST00000378726 RNMTO43148 476 aaKnown RBP24.55■■□□□ 1.52
SSU72-204ENST00000378726 PRDM11Q9NQV5 511 aa24.55■■□□□ 1.52
SSU72-204ENST00000378726 CAMTA1Q9Y6Y1 1673 aa24.54■■□□□ 1.52
SSU72-204ENST00000378726 CHMP4BQ9H444 224 aaKnown RBP24.54■■□□□ 1.52
SSU72-204ENST00000378726 TATP17735 454 aaPredicted RBP24.54■■□□□ 1.52
SSU72-204ENST00000378726 CRYBG1Q9Y4K1 1723 aa24.53■■□□□ 1.52
SSU72-204ENST00000378726 RGS3P49796 1198 aa24.53■■□□□ 1.52
SSU72-204ENST00000378726 PTPRCP08575 1304 aa24.52■■□□□ 1.52
SSU72-204ENST00000378726 DDRGK1Q96HY6 314 aa24.51■■□□□ 1.51
SSU72-204ENST00000378726 SOS1Q07889 1333 aaPredicted RBP24.51■■□□□ 1.51
SSU72-204ENST00000378726 BTBD11A6QL63 1104 aa24.51■■□□□ 1.51
SSU72-204ENST00000378726 CCDC30Q5VVM6 783 aa24.51■■□□□ 1.51
SSU72-204ENST00000378726 STK31Q9BXU1 1019 aa24.51■■□□□ 1.51
SSU72-204ENST00000378726 ABCC6O95255 1503 aa24.51■■□□□ 1.51
SSU72-204ENST00000378726 LMO7Q8WWI1 1683 aa24.51■■□□□ 1.51
SSU72-204ENST00000378726 HDAC1Q13547 482 aaPredicted RBP24.5■■□□□ 1.51
SSU72-204ENST00000378726 SPG7Q9UQ90 795 aa24.5■■□□□ 1.51
SSU72-204ENST00000378726 USP35Q9P2H5 1018 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms