RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 MAPK8IP3Q9UPT6 1336 aa25.43■■□□□ 1.66
SPSB1-203ENST00000377399 PRKAR2BP31323 418 aa25.43■■□□□ 1.66
SPSB1-203ENST00000377399 FAM98CQ17RN3 349 aaKnown RBP25.43■■□□□ 1.66
SPSB1-203ENST00000377399 CCDC146Q8IYE0 955 aa25.42■■□□□ 1.66
SPSB1-203ENST00000377399 RAPGEF4Q8WZA2 1011 aa25.41■■□□□ 1.66
SPSB1-203ENST00000377399 USP35Q9P2H5 1018 aa25.41■■□□□ 1.66
SPSB1-203ENST00000377399 RUNDC1Q96C34 613 aa25.4■■□□□ 1.66
SPSB1-203ENST00000377399 SPATA31A5Q5VU36 1347 aa25.38■■□□□ 1.65
SPSB1-203ENST00000377399 SPATA31A7Q8IWB4 1347 aa25.38■■□□□ 1.65
SPSB1-203ENST00000377399 SPATA31A1Q5TZJ5 1347 aa25.37■■□□□ 1.65
SPSB1-203ENST00000377399 PARP4Q9UKK3 1724 aaKnown RBP25.37■■□□□ 1.65
SPSB1-203ENST00000377399 TATP17735 454 aaPredicted RBP25.37■■□□□ 1.65
SPSB1-203ENST00000377399 BAG6P46379 1132 aa25.37■■□□□ 1.65
SPSB1-203ENST00000377399 TCP11L2Q8N4U5 519 aa25.37■■□□□ 1.65
SPSB1-203ENST00000377399 PLEKHF1Q96S99 279 aa25.35■■□□□ 1.65
SPSB1-203ENST00000377399 THRAP3Q9Y2W1 955 aaKnown RBP25.35■■□□□ 1.65
SPSB1-203ENST00000377399 MEGF6O75095 1541 aa25.35■■□□□ 1.65
SPSB1-203ENST00000377399 WNK3Q9BYP7 1800 aa25.35■■□□□ 1.65
SPSB1-203ENST00000377399 PLEKHG2Q9H7P9 1386 aa25.34■■□□□ 1.65
SPSB1-203ENST00000377399 IL2RBP14784 551 aa25.34■■□□□ 1.65
SPSB1-203ENST00000377399 OVOS2A0A0G2JMS6 1433 aa25.31■■□□□ 1.64
SPSB1-203ENST00000377399 PLEKHO1Q53GL0 409 aaPredicted RBP25.31■■□□□ 1.64
SPSB1-203ENST00000377399 CDCA7Q9BWT1 371 aaPredicted RBP25.31■■□□□ 1.64
SPSB1-203ENST00000377399 APAF1O14727 1248 aa25.3■■□□□ 1.64
SPSB1-203ENST00000377399 HNRNPUQ00839 825 aaKnown RBP eCLIP25.3■■□□□ 1.64
SPSB1-203ENST00000377399 AMOTQ4VCS5 1084 aa25.3■■□□□ 1.64
SPSB1-203ENST00000377399 GAS2L2Q8NHY3 880 aa25.3■■□□□ 1.64
SPSB1-203ENST00000377399 PHACTR3Q96KR7 559 aa25.3■■□□□ 1.64
SPSB1-203ENST00000377399 DISP2A7MBM2 1401 aa25.29■■□□□ 1.64
SPSB1-203ENST00000377399 BARGINQ6ZT62 677 aa25.29■■□□□ 1.64
SPSB1-203ENST00000377399 YTHDC1Q96MU7 727 aaKnown RBP25.29■■□□□ 1.64
SPSB1-203ENST00000377399 PKD1L3Q7Z443 1732 aa25.29■■□□□ 1.64
SPSB1-203ENST00000377399 SPG7Q9UQ90 795 aa25.28■■□□□ 1.64
SPSB1-203ENST00000377399 NFE2L2Q16236 605 aa25.27■■□□□ 1.64
SPSB1-203ENST00000377399 THSD7AQ9UPZ6 1657 aa25.26■■□□□ 1.63
SPSB1-203ENST00000377399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.26■■□□□ 1.63
SPSB1-203ENST00000377399 TMPOP42166 694 aaKnown RBP25.25■■□□□ 1.63
SPSB1-203ENST00000377399 NEUROD2Q15784 382 aa25.25■■□□□ 1.63
SPSB1-203ENST00000377399 MTHFSDQ2M296 383 aaKnown RBP25.25■■□□□ 1.63
SPSB1-203ENST00000377399 FAM182BQ5T319 152 aa25.25■■□□□ 1.63
SPSB1-203ENST00000377399 ZNF530Q6P9A1 599 aaPredicted RBP25.25■■□□□ 1.63
SPSB1-203ENST00000377399 RRP7AQ9Y3A4 280 aaKnown RBP25.25■■□□□ 1.63
SPSB1-203ENST00000377399 SENP3-EIF4A1A0A087X0R7 540 aa25.24■■□□□ 1.63
SPSB1-203ENST00000377399 EN1Q05925 392 aaPredicted RBP25.24■■□□□ 1.63
SPSB1-203ENST00000377399 C1orf141Q5JVX7 400 aa25.24■■□□□ 1.63
SPSB1-203ENST00000377399 NGEFQ8N5V2 710 aa25.24■■□□□ 1.63
SPSB1-203ENST00000377399 ZCRB1Q8TBF4 217 aaKnown RBP25.24■■□□□ 1.63
SPSB1-203ENST00000377399 TNS2Q63HR2 1409 aa25.23■■□□□ 1.63
SPSB1-203ENST00000377399 PCDH11XQ9BZA7 1347 aa25.23■■□□□ 1.63
SPSB1-203ENST00000377399 PCDH11YQ9BZA8 1340 aa25.23■■□□□ 1.63
SPSB1-203ENST00000377399 RIPK4P57078 832 aa25.23■■□□□ 1.63
SPSB1-203ENST00000377399 LMOD3Q0VAK6 560 aa25.23■■□□□ 1.63
SPSB1-203ENST00000377399 FAM196AQ6ZSG2 479 aa25.23■■□□□ 1.63
SPSB1-203ENST00000377399 SALL2Q9Y467 1007 aaPredicted RBP25.22■■□□□ 1.63
SPSB1-203ENST00000377399 LRRC37A3O60309 1634 aa25.22■■□□□ 1.63
SPSB1-203ENST00000377399 DLG5Q8TDM6 1919 aa25.21■■□□□ 1.63
SPSB1-203ENST00000377399 MAP3K5Q99683 1374 aa25.2■■□□□ 1.63
SPSB1-203ENST00000377399 EXOC5O00471 708 aa25.2■■□□□ 1.62
SPSB1-203ENST00000377399 DDB1Q16531 1140 aa25.2■■□□□ 1.62
SPSB1-203ENST00000377399 PSDA5PKW4 1024 aaPredicted RBP25.19■■□□□ 1.62
SPSB1-203ENST00000377399 NCBP3Q53F19 620 aaKnown RBP25.19■■□□□ 1.62
SPSB1-203ENST00000377399 AKAP4Q5JQC9 854 aa25.19■■□□□ 1.62
SPSB1-203ENST00000377399 LRP5O75197 1615 aa25.19■■□□□ 1.62
SPSB1-203ENST00000377399 SHANK3Q9BYB0 1731 aa25.18■■□□□ 1.62
SPSB1-203ENST00000377399 GNAT3A8MTJ3 354 aa25.18■■□□□ 1.62
SPSB1-203ENST00000377399 IFNL2Q8IZJ0 200 aa25.18■■□□□ 1.62
SPSB1-203ENST00000377399 RTF1Q92541 710 aaKnown RBP25.18■■□□□ 1.62
SPSB1-203ENST00000377399 PDE3BQ13370 1112 aa25.17■■□□□ 1.62
SPSB1-203ENST00000377399 DDX54Q8TDD1 881 aaKnown RBP25.16■■□□□ 1.62
SPSB1-203ENST00000377399 ZBED9Q6R2W3 1325 aa25.15■■□□□ 1.62
SPSB1-203ENST00000377399 TRIM37O94972 964 aa25.15■■□□□ 1.62
SPSB1-203ENST00000377399 HSP90AB1P08238 724 aaKnown RBP25.15■■□□□ 1.62
SPSB1-203ENST00000377399 PHKG2P15735 406 aa25.15■■□□□ 1.62
SPSB1-203ENST00000377399 CCDC27Q2M243 656 aa25.15■■□□□ 1.62
SPSB1-203ENST00000377399 CYP27B1O15528 508 aa25.14■■□□□ 1.62
SPSB1-203ENST00000377399 HTATSF1O43719 755 aaKnown RBP25.14■■□□□ 1.62
SPSB1-203ENST00000377399 TNS1Q9HBL0 1735 aaKnown RBP25.13■■□□□ 1.61
SPSB1-203ENST00000377399 EZH2Q15910 746 aaKnown RBP25.13■■□□□ 1.61
SPSB1-203ENST00000377399 CAMKK2Q96RR4 588 aa25.12■■□□□ 1.61
SPSB1-203ENST00000377399 TRIM35Q9UPQ4 493 aa25.12■■□□□ 1.61
SPSB1-203ENST00000377399 APBA3O96018 575 aa25.11■■□□□ 1.61
SPSB1-203ENST00000377399 R3HDM1Q15032 1099 aaKnown RBP25.11■■□□□ 1.61
SPSB1-203ENST00000377399 WWC1Q8IX03 1113 aa25.11■■□□□ 1.61
SPSB1-203ENST00000377399 CALD1Q05682 793 aaKnown RBP25.1■■□□□ 1.61
SPSB1-203ENST00000377399 MPRIPQ6WCQ1 1025 aa25.09■■□□□ 1.61
SPSB1-203ENST00000377399 MCM10Q7L590 875 aa25.09■■□□□ 1.61
SPSB1-203ENST00000377399 DCAF5Q96JK2 942 aa25.09■■□□□ 1.61
SPSB1-203ENST00000377399 VIRMAQ69YN4 1812 aaKnown RBP25.09■■□□□ 1.61
SPSB1-203ENST00000377399 DCTN1Q14203 1278 aa25.08■■□□□ 1.61
SPSB1-203ENST00000377399 SCN11AQ9UI33 1791 aa25.08■■□□□ 1.6
SPSB1-203ENST00000377399 RNMTO43148 476 aaKnown RBP25.07■■□□□ 1.6
SPSB1-203ENST00000377399 ZNF521Q96K83 1311 aa25.07■■□□□ 1.6
SPSB1-203ENST00000377399 KDM6AO15550 1401 aaPredicted RBP25.06■■□□□ 1.6
SPSB1-203ENST00000377399 NKX1-1Q15270 411 aaPredicted RBP25.06■■□□□ 1.6
SPSB1-203ENST00000377399 WDR63Q8IWG1 891 aa25.06■■□□□ 1.6
SPSB1-203ENST00000377399 THUMPD2Q9BTF0 503 aaKnown RBP25.06■■□□□ 1.6
SPSB1-203ENST00000377399 ADAMTS7Q9UKP4 1686 aa25.06■■□□□ 1.6
SPSB1-203ENST00000377399 TEFQ10587 303 aa25.05■■□□□ 1.6
SPSB1-203ENST00000377399 CEMIPQ8WUJ3 1361 aa25.05■■□□□ 1.6
SPSB1-203ENST00000377399 GOLGA2Q08379 1002 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms