RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 NUCB1Q02818 461 aa21.46■■□□□ 1.03
TRIM27-201ENST00000377194 LNPKQ9C0E8 428 aa21.45■■□□□ 1.02
TRIM27-201ENST00000377194 FER1L4A9Z1Z3 1794 aa21.45■■□□□ 1.02
TRIM27-201ENST00000377194 KCNA6P17658 529 aa21.45■■□□□ 1.02
TRIM27-201ENST00000377194 TTC21AQ8NDW8 1320 aa21.44■■□□□ 1.02
TRIM27-201ENST00000377194 CHL1O00533 1208 aa21.44■■□□□ 1.02
TRIM27-201ENST00000377194 SIRT2Q8IXJ6 389 aa21.44■■□□□ 1.02
TRIM27-201ENST00000377194 DIP2AQ14689 1571 aa21.44■■□□□ 1.02
TRIM27-201ENST00000377194 FOXO3O43524 673 aa21.43■■□□□ 1.02
TRIM27-201ENST00000377194 RGPD1P0DJD0 1748 aa21.43■■□□□ 1.02
TRIM27-201ENST00000377194 MCM4P33991 863 aa21.42■■□□□ 1.02
TRIM27-201ENST00000377194 CHD1LQ86WJ1 897 aa21.42■■□□□ 1.02
TRIM27-201ENST00000377194 ERBB4Q15303 1308 aa21.41■■□□□ 1.02
TRIM27-201ENST00000377194 MIS18AQ9NYP9 233 aa21.41■■□□□ 1.02
TRIM27-201ENST00000377194 MTHFSDQ2M296 383 aaKnown RBP21.4■■□□□ 1.02
TRIM27-201ENST00000377194 NUTM2GQ5VZR2 741 aa21.4■■□□□ 1.02
TRIM27-201ENST00000377194 API5Q9BZZ5 524 aaKnown RBP21.4■■□□□ 1.02
TRIM27-201ENST00000377194 EYA1Q99502 592 aa21.39■■□□□ 1.01
TRIM27-201ENST00000377194 SBNO1A3KN83 1393 aa21.38■■□□□ 1.01
TRIM27-201ENST00000377194 FLT4P35916 1363 aa21.38■■□□□ 1.01
TRIM27-201ENST00000377194 TRAK2O60296 914 aa21.38■■□□□ 1.01
TRIM27-201ENST00000377194 AMPHP49418 695 aa21.38■■□□□ 1.01
TRIM27-201ENST00000377194 MFAP1P55081 439 aaKnown RBP21.38■■□□□ 1.01
TRIM27-201ENST00000377194 NLRP6P59044 892 aa21.38■■□□□ 1.01
TRIM27-201ENST00000377194 ANKRD45Q5TZF3 282 aa21.38■■□□□ 1.01
TRIM27-201ENST00000377194 TRHP20396 242 aaPredicted RBP21.38■■□□□ 1.01
TRIM27-201ENST00000377194 CRB1P82279 1406 aa21.37■■□□□ 1.01
TRIM27-201ENST00000377194 XRN1Q8IZH2 1706 aaKnown RBP21.37■■□□□ 1.01
TRIM27-201ENST00000377194 ARHGEF10O15013 1369 aa21.37■■□□□ 1.01
TRIM27-201ENST00000377194 CHMP4BQ9H444 224 aaKnown RBP21.37■■□□□ 1.01
TRIM27-201ENST00000377194 PIK3C2AO00443 1686 aa21.36■■□□□ 1.01
TRIM27-201ENST00000377194 ESPNB1AK53 854 aa21.36■■□□□ 1.01
TRIM27-201ENST00000377194 RIMS1Q86UR5 1692 aaKnown RBP21.36■■□□□ 1.01
TRIM27-201ENST00000377194 GCC1Q96CN9 775 aa21.35■■□□□ 1.01
TRIM27-201ENST00000377194 KDRP35968 1356 aa21.35■■□□□ 1.01
TRIM27-201ENST00000377194 RBM33Q96EV2 1170 aaKnown RBP21.35■■□□□ 1.01
TRIM27-201ENST00000377194 C22orf23Q9BZE7 217 aa21.35■■□□□ 1.01
TRIM27-201ENST00000377194 CEP170BQ9Y4F5 1589 aaPredicted RBP21.35■■□□□ 1.01
TRIM27-201ENST00000377194 RGS12O14924 1447 aa21.34■■□□□ 1.01
TRIM27-201ENST00000377194 KIAA0232Q92628 1395 aa21.34■■□□□ 1.01
TRIM27-201ENST00000377194 IGSF1Q8N6C5 1336 aa21.34■■□□□ 1.01
TRIM27-201ENST00000377194 MRE11P49959 708 aa21.33■■□□□ 1.01
TRIM27-201ENST00000377194 INTS3Q68E01 1043 aaKnown RBP21.33■■□□□ 1.01
TRIM27-201ENST00000377194 GRPEL1Q9HAV7 217 aa21.33■■□□□ 1.01
TRIM27-201ENST00000377194 FMN2Q9NZ56 1722 aa21.32■■□□□ 1
TRIM27-201ENST00000377194 CHMP5Q9NZZ3 219 aa21.32■■□□□ 1
TRIM27-201ENST00000377194 ABTB2Q8N961 1025 aa21.31■■□□□ 1
TRIM27-201ENST00000377194 ANKARQ7Z5J8 1434 aa21.31■■□□□ 1
TRIM27-201ENST00000377194 RTF1Q92541 710 aaKnown RBP21.31■■□□□ 1
TRIM27-201ENST00000377194 SLC4A2P04920 1241 aa21.3■■□□□ 1
TRIM27-201ENST00000377194 HOXC9P31274 260 aa21.3■■□□□ 1
TRIM27-201ENST00000377194 BMP2KLQ5H9B9 411 aa21.29■■□□□ 1
TRIM27-201ENST00000377194 TSPYL4Q9UJ04 414 aa21.29■■□□□ 1
TRIM27-201ENST00000377194 HAP1P54257 671 aaPredicted RBP21.29■■□□□ 1
TRIM27-201ENST00000377194 KIF24Q5T7B8 1368 aa21.29■■□□□ 1
TRIM27-201ENST00000377194 G2E3Q7L622 706 aa21.27■■□□□ 1
TRIM27-201ENST00000377194 TRIM44Q96DX7 344 aaPredicted RBP21.27■■□□□ 1
TRIM27-201ENST00000377194 LTV1Q96GA3 475 aaPredicted RBP21.27■■□□□ 1
TRIM27-201ENST00000377194 MARF1Q9Y4F3 1742 aaKnown RBP21.26■□□□□ 0.99
TRIM27-201ENST00000377194 GAS2L2Q8NHY3 880 aa21.26■□□□□ 0.99
TRIM27-201ENST00000377194 DCTPP1Q9H773 170 aa21.26■□□□□ 0.99
TRIM27-201ENST00000377194 PTPRCP08575 1304 aa21.25■□□□□ 0.99
TRIM27-201ENST00000377194 C14orf37Q86TY3 774 aa21.25■□□□□ 0.99
TRIM27-201ENST00000377194 MEIS3Q99687 375 aa21.25■□□□□ 0.99
TRIM27-201ENST00000377194 MSH6P52701 1360 aa21.25■□□□□ 0.99
TRIM27-201ENST00000377194 ATP10DQ9P241 1426 aa21.25■□□□□ 0.99
TRIM27-201ENST00000377194 ANKLE2Q86XL3 938 aa21.24■□□□□ 0.99
TRIM27-201ENST00000377194 PHF8Q9UPP1 1060 aa21.24■□□□□ 0.99
TRIM27-201ENST00000377194 F6X3S4 739 aa21.23■□□□□ 0.99
TRIM27-201ENST00000377194 GAS2L3Q86XJ1 694 aa21.23■□□□□ 0.99
TRIM27-201ENST00000377194 ANKRD44Q8N8A2 993 aa21.23■□□□□ 0.99
TRIM27-201ENST00000377194 NWD1Q149M9 1564 aa21.23■□□□□ 0.99
TRIM27-201ENST00000377194 CEP85Q6P2H3 762 aa21.23■□□□□ 0.99
TRIM27-201ENST00000377194 C16orf71Q8IYS4 520 aaPredicted RBP21.22■□□□□ 0.99
TRIM27-201ENST00000377194 RTL1A6NKG5 1358 aa21.22■□□□□ 0.99
TRIM27-201ENST00000377194 USHBP1Q8N6Y0 703 aa21.22■□□□□ 0.99
TRIM27-201ENST00000377194 IL17REQ8NFR9 667 aa21.22■□□□□ 0.99
TRIM27-201ENST00000377194 GNAT3A8MTJ3 354 aa21.22■□□□□ 0.99
TRIM27-201ENST00000377194 RBM25P49756 843 aaKnown RBP21.22■□□□□ 0.99
TRIM27-201ENST00000377194 TBC1D9Q6ZT07 1266 aa21.21■□□□□ 0.99
TRIM27-201ENST00000377194 PLEKHM2Q8IWE5 1019 aa21.21■□□□□ 0.99
TRIM27-201ENST00000377194 GSPT1P15170 499 aaKnown RBP21.2■□□□□ 0.98
TRIM27-201ENST00000377194 SLC4A10Q6U841 1118 aa21.2■□□□□ 0.98
TRIM27-201ENST00000377194 HSCBQ8IWL3 235 aa21.2■□□□□ 0.98
TRIM27-201ENST00000377194 RPAP2Q8IXW5 612 aaPredicted RBP21.2■□□□□ 0.98
TRIM27-201ENST00000377194 HTATSF1O43719 755 aaKnown RBP21.2■□□□□ 0.98
TRIM27-201ENST00000377194 CHD2O14647 1828 aaKnown RBP21.19■□□□□ 0.98
TRIM27-201ENST00000377194 DDX11L8A8MPP1 907 aa21.19■□□□□ 0.98
TRIM27-201ENST00000377194 KIAA1211Q6ZU35 1233 aa21.19■□□□□ 0.98
TRIM27-201ENST00000377194 OTUD7AQ8TE49 926 aaPredicted RBP21.19■□□□□ 0.98
TRIM27-201ENST00000377194 NECTIN2Q92692 538 aa21.18■□□□□ 0.98
TRIM27-201ENST00000377194 RBM10P98175 930 aaKnown RBP21.18■□□□□ 0.98
TRIM27-201ENST00000377194 ESCO1Q5FWF5 840 aa21.18■□□□□ 0.98
TRIM27-201ENST00000377194 TPM2P07951 284 aa21.17■□□□□ 0.98
TRIM27-201ENST00000377194 APBB1O00213 710 aa21.17■□□□□ 0.98
TRIM27-201ENST00000377194 KIF2CQ99661 725 aa21.17■□□□□ 0.98
TRIM27-201ENST00000377194 SMARCA5O60264 1052 aaPredicted RBP21.16■□□□□ 0.98
TRIM27-201ENST00000377194 PDCL3Q9H2J4 239 aa21.16■□□□□ 0.98
TRIM27-201ENST00000377194 USP54Q70EL1 1684 aa21.15■□□□□ 0.98
TRIM27-201ENST00000377194 NBPF6Q5VWK0 638 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 385.7 ms