RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 AKAP12Q02952 1782 aa13.86□□□□□ -0.19
C9orf85-202ENST00000377027 PRDM11Q9NQV5 511 aa13.85□□□□□ -0.19
C9orf85-202ENST00000377027 SPATA31A1Q5TZJ5 1347 aa13.85□□□□□ -0.19
C9orf85-202ENST00000377027 L3MBTL2Q969R5 705 aa13.84□□□□□ -0.19
C9orf85-202ENST00000377027 WNK3Q9BYP7 1800 aa13.84□□□□□ -0.19
C9orf85-202ENST00000377027 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
C9orf85-202ENST00000377027 SLIT3O75094 1523 aa13.84□□□□□ -0.19
C9orf85-202ENST00000377027 SSH2Q76I76 1423 aa13.83□□□□□ -0.2
C9orf85-202ENST00000377027 RREB1Q92766 1687 aa13.83□□□□□ -0.2
C9orf85-202ENST00000377027 ZC3H6P61129 1189 aaKnown RBP13.83□□□□□ -0.2
C9orf85-202ENST00000377027 SIN3AQ96ST3 1273 aa13.83□□□□□ -0.2
C9orf85-202ENST00000377027 PARP4Q9UKK3 1724 aaKnown RBP13.83□□□□□ -0.2
C9orf85-202ENST00000377027 CPDO75976 1380 aa13.83□□□□□ -0.2
C9orf85-202ENST00000377027 DISP2A7MBM2 1401 aa13.82□□□□□ -0.2
C9orf85-202ENST00000377027 RGPD5Q99666 1765 aa13.82□□□□□ -0.2
C9orf85-202ENST00000377027 USP6P35125 1406 aa13.81□□□□□ -0.2
C9orf85-202ENST00000377027 PEAK1Q9H792 1746 aa13.81□□□□□ -0.2
C9orf85-202ENST00000377027 A0A0G2JS52 829 aa13.81□□□□□ -0.2
C9orf85-202ENST00000377027 MYT1Q01538 1121 aa13.81□□□□□ -0.2
C9orf85-202ENST00000377027 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
C9orf85-202ENST00000377027 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
C9orf85-202ENST00000377027 LRRC37A3O60309 1634 aa13.8□□□□□ -0.2
C9orf85-202ENST00000377027 STRN4Q9NRL3 753 aa13.8□□□□□ -0.2
C9orf85-202ENST00000377027 MON2Q7Z3U7 1717 aa13.79□□□□□ -0.2
C9orf85-202ENST00000377027 SBF2Q86WG5 1849 aa13.79□□□□□ -0.2
C9orf85-202ENST00000377027 TMEM92Q6UXU6 159 aa13.79□□□□□ -0.2
C9orf85-202ENST00000377027 ABTB2Q8N961 1025 aa13.79□□□□□ -0.2
C9orf85-202ENST00000377027 SRPK2P78362 688 aaKnown RBP13.78□□□□□ -0.2
C9orf85-202ENST00000377027 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
C9orf85-202ENST00000377027 LARP1Q6PKG0 1096 aaKnown RBP13.78□□□□□ -0.2
C9orf85-202ENST00000377027 SLAIN1Q8ND83 568 aa13.78□□□□□ -0.2
C9orf85-202ENST00000377027 CABP1Q9NZU7 370 aa13.77□□□□□ -0.21
C9orf85-202ENST00000377027 USP54Q70EL1 1684 aa13.76□□□□□ -0.21
C9orf85-202ENST00000377027 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
C9orf85-202ENST00000377027 GCP02774 474 aa13.76□□□□□ -0.21
C9orf85-202ENST00000377027 BAG6P46379 1132 aa13.76□□□□□ -0.21
C9orf85-202ENST00000377027 SF3B2Q13435 895 aaKnown RBP13.76□□□□□ -0.21
C9orf85-202ENST00000377027 USP35Q9P2H5 1018 aa13.76□□□□□ -0.21
C9orf85-202ENST00000377027 NFAT5O94916 1531 aa13.75□□□□□ -0.21
C9orf85-202ENST00000377027 BARGINQ6ZT62 677 aa13.75□□□□□ -0.21
C9orf85-202ENST00000377027 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
C9orf85-202ENST00000377027 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
C9orf85-202ENST00000377027 BRD4O60885 1362 aaPredicted RBP13.74□□□□□ -0.21
C9orf85-202ENST00000377027 EZH2Q15910 746 aaKnown RBP13.74□□□□□ -0.21
C9orf85-202ENST00000377027 ROCK2O75116 1388 aaKnown RBP13.73□□□□□ -0.21
C9orf85-202ENST00000377027 TRIM37O94972 964 aa13.73□□□□□ -0.21
C9orf85-202ENST00000377027 NLRP13Q86W25 1043 aa13.73□□□□□ -0.21
C9orf85-202ENST00000377027 CAMKK2Q96RR4 588 aa13.73□□□□□ -0.21
C9orf85-202ENST00000377027 CRB1P82279 1406 aa13.73□□□□□ -0.21
C9orf85-202ENST00000377027 AATKQ6ZMQ8 1374 aa13.72□□□□□ -0.21
C9orf85-202ENST00000377027 KIF3CO14782 793 aa13.72□□□□□ -0.21
C9orf85-202ENST00000377027 NEUROD1Q13562 356 aa13.72□□□□□ -0.21
C9orf85-202ENST00000377027 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
C9orf85-202ENST00000377027 AXIN2Q9Y2T1 843 aa13.72□□□□□ -0.21
C9orf85-202ENST00000377027 RGPD3A6NKT7 1758 aaPredicted RBP13.72□□□□□ -0.21
C9orf85-202ENST00000377027 RGPD4Q7Z3J3 1758 aa13.72□□□□□ -0.21
C9orf85-202ENST00000377027 TCP11L2Q8N4U5 519 aa13.71□□□□□ -0.21
C9orf85-202ENST00000377027 LTN1O94822 1766 aa13.71□□□□□ -0.22
C9orf85-202ENST00000377027 TTC21BQ7Z4L5 1316 aa13.7□□□□□ -0.22
C9orf85-202ENST00000377027 EVC2Q86UK5 1308 aa13.7□□□□□ -0.22
C9orf85-202ENST00000377027 C2orf72A6NCS6 295 aa13.7□□□□□ -0.22
C9orf85-202ENST00000377027 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
C9orf85-202ENST00000377027 TMC2Q8TDI7 906 aa13.7□□□□□ -0.22
C9orf85-202ENST00000377027 SBNO2Q9Y2G9 1366 aa13.7□□□□□ -0.22
C9orf85-202ENST00000377027 EVA1CP58658 441 aa13.69□□□□□ -0.22
C9orf85-202ENST00000377027 R3HDM1Q15032 1099 aaKnown RBP13.69□□□□□ -0.22
C9orf85-202ENST00000377027 CRISPLD2Q9H0B8 497 aa13.69□□□□□ -0.22
C9orf85-202ENST00000377027 GPHNQ9NQX3 736 aaPredicted RBP13.69□□□□□ -0.22
C9orf85-202ENST00000377027 THRAP3Q9Y2W1 955 aaKnown RBP13.68□□□□□ -0.22
C9orf85-202ENST00000377027 PTF1AQ7RTS3 328 aa13.67□□□□□ -0.22
C9orf85-202ENST00000377027 ARHGEF25Q86VW2 580 aa13.67□□□□□ -0.22
C9orf85-202ENST00000377027 ABCC6O95255 1503 aa13.66□□□□□ -0.22
C9orf85-202ENST00000377027 ZBTB7CA1YPR0 619 aa13.66□□□□□ -0.22
C9orf85-202ENST00000377027 APBA3O96018 575 aa13.66□□□□□ -0.22
C9orf85-202ENST00000377027 PDE4AP27815 886 aa13.66□□□□□ -0.22
C9orf85-202ENST00000377027 PARD3Q8TEW0 1356 aa13.66□□□□□ -0.22
C9orf85-202ENST00000377027 CASZ1Q86V15 1759 aa13.66□□□□□ -0.22
C9orf85-202ENST00000377027 WDR17Q8IZU2 1322 aa13.65□□□□□ -0.22
C9orf85-202ENST00000377027 OVOS2A0A0G2JMS6 1433 aa13.65□□□□□ -0.22
C9orf85-202ENST00000377027 OVOS2A0A0J9YW53 1432 aa13.65□□□□□ -0.22
C9orf85-202ENST00000377027 OVOS2Q6IE36 1432 aa13.65□□□□□ -0.22
C9orf85-202ENST00000377027 PDE3BQ13370 1112 aa13.65□□□□□ -0.22
C9orf85-202ENST00000377027 KTN1Q86UP2 1357 aaKnown RBP13.65□□□□□ -0.22
C9orf85-202ENST00000377027 TTC21AQ8NDW8 1320 aa13.64□□□□□ -0.23
C9orf85-202ENST00000377027 USP31Q70CQ4 1352 aa13.64□□□□□ -0.23
C9orf85-202ENST00000377027 TOM1L2Q6ZVM7 507 aa13.62□□□□□ -0.23
C9orf85-202ENST00000377027 MARCH10Q8NA82 808 aaPredicted RBP13.62□□□□□ -0.23
C9orf85-202ENST00000377027 LARP6Q9BRS8 491 aaKnown RBP13.62□□□□□ -0.23
C9orf85-202ENST00000377027 BCL9O00512 1426 aa13.62□□□□□ -0.23
C9orf85-202ENST00000377027 NHSQ6T4R5 1651 aa13.62□□□□□ -0.23
C9orf85-202ENST00000377027 A0A1W2PP64 1363 aa13.61□□□□□ -0.23
C9orf85-202ENST00000377027 FOXK1P85037 733 aa13.61□□□□□ -0.23
C9orf85-202ENST00000377027 NME9Q86XW9 330 aa13.61□□□□□ -0.23
C9orf85-202ENST00000377027 CARD11Q9BXL7 1154 aa13.61□□□□□ -0.23
C9orf85-202ENST00000377027 UTRNP46939 3433 aa13.61□□□□□ -0.23
C9orf85-202ENST00000377027 RGPD2P0DJD1 1756 aa13.6□□□□□ -0.23
C9orf85-202ENST00000377027 DSG2Q14126 1118 aa13.6□□□□□ -0.23
C9orf85-202ENST00000377027 DDB1Q16531 1140 aa13.6□□□□□ -0.23
C9orf85-202ENST00000377027 TNS2Q63HR2 1409 aa13.6□□□□□ -0.23
C9orf85-202ENST00000377027 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms