RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 TATP17735 454 aaPredicted RBP30.55■■■□□ 2.48
YIF1A-202ENST00000376899 TNS1Q9HBL0 1735 aaKnown RBP30.54■■■□□ 2.48
YIF1A-202ENST00000376899 DIAPH1O60610 1272 aaKnown RBP30.54■■■□□ 2.48
YIF1A-202ENST00000376899 KDRP35968 1356 aa30.54■■■□□ 2.48
YIF1A-202ENST00000376899 CCDC125Q86Z20 511 aa30.52■■■□□ 2.48
YIF1A-202ENST00000376899 ZCRB1Q8TBF4 217 aaKnown RBP30.51■■■□□ 2.47
YIF1A-202ENST00000376899 CFAP53Q96M91 514 aa30.51■■■□□ 2.47
YIF1A-202ENST00000376899 AEBP1Q8IUX7 1158 aa30.47■■■□□ 2.47
YIF1A-202ENST00000376899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.47■■■□□ 2.47
YIF1A-202ENST00000376899 SULT6B1Q6IMI4 303 aa30.46■■■□□ 2.47
YIF1A-202ENST00000376899 PRKRIP1Q9H875 184 aaPredicted RBP30.46■■■□□ 2.47
YIF1A-202ENST00000376899 MYBBP1AQ9BQG0 1328 aaKnown RBP30.46■■■□□ 2.47
YIF1A-202ENST00000376899 NHSQ6T4R5 1651 aa30.46■■■□□ 2.47
YIF1A-202ENST00000376899 PCDH11XQ9BZA7 1347 aa30.45■■■□□ 2.46
YIF1A-202ENST00000376899 PCDH11YQ9BZA8 1340 aa30.45■■■□□ 2.46
YIF1A-202ENST00000376899 DDX54Q8TDD1 881 aaKnown RBP30.44■■■□□ 2.46
YIF1A-202ENST00000376899 SPG7Q9UQ90 795 aa30.42■■■□□ 2.46
YIF1A-202ENST00000376899 DOT1LQ8TEK3 1739 aa30.42■■■□□ 2.46
YIF1A-202ENST00000376899 TRIM37O94972 964 aa30.41■■■□□ 2.46
YIF1A-202ENST00000376899 CYP27B1O15528 508 aa30.4■■■□□ 2.46
YIF1A-202ENST00000376899 SF3B2Q13435 895 aaKnown RBP30.39■■■□□ 2.46
YIF1A-202ENST00000376899 U2SURPO15042 1029 aaKnown RBP30.38■■■□□ 2.45
YIF1A-202ENST00000376899 HMOX1P09601 288 aa30.38■■■□□ 2.45
YIF1A-202ENST00000376899 NUDCQ9Y266 331 aa30.38■■■□□ 2.45
YIF1A-202ENST00000376899 AMOTQ4VCS5 1084 aa30.36■■■□□ 2.45
YIF1A-202ENST00000376899 BCL11BQ9C0K0 894 aaPredicted RBP30.36■■■□□ 2.45
YIF1A-202ENST00000376899 TOGARAM1Q9Y4F4 1720 aa30.36■■■□□ 2.45
YIF1A-202ENST00000376899 RGPD3A6NKT7 1758 aaPredicted RBP30.36■■■□□ 2.45
YIF1A-202ENST00000376899 RGPD4Q7Z3J3 1758 aa30.36■■■□□ 2.45
YIF1A-202ENST00000376899 PLEKHO1Q53GL0 409 aaPredicted RBP30.35■■■□□ 2.45
YIF1A-202ENST00000376899 NKX1-1Q15270 411 aaPredicted RBP30.34■■■□□ 2.45
YIF1A-202ENST00000376899 KAT6BQ8WYB5 2073 aa30.34■■■□□ 2.45
YIF1A-202ENST00000376899 BAG6P46379 1132 aa30.33■■■□□ 2.45
YIF1A-202ENST00000376899 BTAF1O14981 1849 aa30.33■■■□□ 2.45
YIF1A-202ENST00000376899 PHKG2P15735 406 aa30.32■■■□□ 2.44
YIF1A-202ENST00000376899 PTF1AQ7RTS3 328 aa30.32■■■□□ 2.44
YIF1A-202ENST00000376899 IFNL2Q8IZJ0 200 aa30.32■■■□□ 2.44
YIF1A-202ENST00000376899 DEFB132Q7Z7B7 95 aa30.31■■■□□ 2.44
YIF1A-202ENST00000376899 ACSBG1Q96GR2 724 aa30.31■■■□□ 2.44
YIF1A-202ENST00000376899 KCNQ2O43526 872 aa30.3■■■□□ 2.44
YIF1A-202ENST00000376899 RSPH6AQ9H0K4 717 aa30.3■■■□□ 2.44
YIF1A-202ENST00000376899 ITGB4P16144 1822 aa30.29■■■□□ 2.44
YIF1A-202ENST00000376899 APBA3O96018 575 aa30.29■■■□□ 2.44
YIF1A-202ENST00000376899 U2AF1L5P0DN76 240 aaPredicted RBP30.29■■■□□ 2.44
YIF1A-202ENST00000376899 U2AF1Q01081 240 aaKnown RBP eCLIP30.29■■■□□ 2.44
YIF1A-202ENST00000376899 ZNF530Q6P9A1 599 aaPredicted RBP30.28■■■□□ 2.44
YIF1A-202ENST00000376899 RREB1Q92766 1687 aa30.27■■■□□ 2.44
YIF1A-202ENST00000376899 FCHSD2O94868 740 aa30.25■■■□□ 2.43
YIF1A-202ENST00000376899 EN1Q05925 392 aaPredicted RBP30.25■■■□□ 2.43
YIF1A-202ENST00000376899 PLSCR1O15162 318 aa30.24■■■□□ 2.43
YIF1A-202ENST00000376899 ANP32CO43423 234 aa30.24■■■□□ 2.43
YIF1A-202ENST00000376899 HSP90AB1P08238 724 aaKnown RBP30.24■■■□□ 2.43
YIF1A-202ENST00000376899 PRKAR2BP31323 418 aa30.24■■■□□ 2.43
YIF1A-202ENST00000376899 PRIM1P49642 420 aaKnown RBP30.24■■■□□ 2.43
YIF1A-202ENST00000376899 CAMKK2Q96RR4 588 aa30.24■■■□□ 2.43
YIF1A-202ENST00000376899 SCN11AQ9UI33 1791 aa30.23■■■□□ 2.43
YIF1A-202ENST00000376899 VIRMAQ69YN4 1812 aaKnown RBP30.23■■■□□ 2.43
YIF1A-202ENST00000376899 ADAMTS7Q9UKP4 1686 aa30.23■■■□□ 2.43
YIF1A-202ENST00000376899 KDM6AO15550 1401 aaPredicted RBP30.22■■■□□ 2.43
YIF1A-202ENST00000376899 MTHFSDQ2M296 383 aaKnown RBP30.22■■■□□ 2.43
YIF1A-202ENST00000376899 C1orf141Q5JVX7 400 aa30.22■■■□□ 2.43
YIF1A-202ENST00000376899 AKAP4Q5JQC9 854 aa30.21■■■□□ 2.43
YIF1A-202ENST00000376899 EZH2Q15910 746 aaKnown RBP30.2■■■□□ 2.43
YIF1A-202ENST00000376899 DCAF5Q96JK2 942 aa30.2■■■□□ 2.43
YIF1A-202ENST00000376899 NUP188Q5SRE5 1749 aa30.19■■■□□ 2.42
YIF1A-202ENST00000376899 SYTL4Q96C24 671 aaPredicted RBP30.19■■■□□ 2.42
YIF1A-202ENST00000376899 GAS2L2Q8NHY3 880 aa30.18■■■□□ 2.42
YIF1A-202ENST00000376899 PHACTR3Q96KR7 559 aa30.18■■■□□ 2.42
YIF1A-202ENST00000376899 LY75O60449 1722 aa30.17■■■□□ 2.42
YIF1A-202ENST00000376899 PLEKHF1Q96S99 279 aa30.15■■■□□ 2.42
YIF1A-202ENST00000376899 MRC1P22897 1456 aa30.14■■■□□ 2.42
YIF1A-202ENST00000376899 ERVV-2B6SEH9 535 aa30.14■■■□□ 2.42
YIF1A-202ENST00000376899 MAP3K5Q99683 1374 aa30.13■■■□□ 2.41
YIF1A-202ENST00000376899 MPRIPQ6WCQ1 1025 aa30.12■■■□□ 2.41
YIF1A-202ENST00000376899 PIGBQ92521 554 aa30.12■■■□□ 2.41
YIF1A-202ENST00000376899 PNNQ9H307 717 aaKnown RBP30.12■■■□□ 2.41
YIF1A-202ENST00000376899 PROM2Q8N271 834 aa30.11■■■□□ 2.41
YIF1A-202ENST00000376899 TMOD3Q9NYL9 352 aa30.1■■■□□ 2.41
YIF1A-202ENST00000376899 DLG5Q8TDM6 1919 aa30.1■■■□□ 2.41
YIF1A-202ENST00000376899 WDR43Q15061 677 aaKnown RBP eCLIP30.09■■■□□ 2.41
YIF1A-202ENST00000376899 CCDC184Q52MB2 194 aa30.09■■■□□ 2.41
YIF1A-202ENST00000376899 GNAT3A8MTJ3 354 aa30.08■■■□□ 2.41
YIF1A-202ENST00000376899 RNMTO43148 476 aaKnown RBP30.08■■■□□ 2.41
YIF1A-202ENST00000376899 TXNRD1Q16881 649 aa30.08■■■□□ 2.41
YIF1A-202ENST00000376899 PAPPAQ13219 1627 aa30.07■■■□□ 2.4
YIF1A-202ENST00000376899 NEFMP07197 916 aa30.06■■■□□ 2.4
YIF1A-202ENST00000376899 LGR6Q9HBX8 967 aa30.06■■■□□ 2.4
YIF1A-202ENST00000376899 SIPA1L3O60292 1781 aaPredicted RBP30.05■■■□□ 2.4
YIF1A-202ENST00000376899 CABP4P57796 275 aa30.05■■■□□ 2.4
YIF1A-202ENST00000376899 PALLDQ8WX93 1383 aa30.04■■■□□ 2.4
YIF1A-202ENST00000376899 SMARCC1Q92922 1105 aaPredicted RBP30.04■■■□□ 2.4
YIF1A-202ENST00000376899 ADAMTS8Q9UP79 889 aa30.04■■■□□ 2.4
YIF1A-202ENST00000376899 CEMIPQ8WUJ3 1361 aa30.03■■■□□ 2.4
YIF1A-202ENST00000376899 MAPK8IP3Q9UPT6 1336 aa30.03■■■□□ 2.4
YIF1A-202ENST00000376899 SLC27A3Q5K4L6 730 aa30.02■■■□□ 2.4
YIF1A-202ENST00000376899 IL17REQ8NFR9 667 aa30.02■■■□□ 2.4
YIF1A-202ENST00000376899 SLC52A2Q9HAB3 445 aa30.02■■■□□ 2.4
YIF1A-202ENST00000376899 NFE2L2Q16236 605 aa30.01■■■□□ 2.39
YIF1A-202ENST00000376899 HTATSF1O43719 755 aaKnown RBP30■■■□□ 2.39
YIF1A-202ENST00000376899 NFATC2IPQ8NCF5 419 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms