RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 IL13P35225 146 aa36.59■■■■□ 3.45
COMMD3-201ENST00000376836 CFAP53Q96M91 514 aa36.59■■■■□ 3.45
COMMD3-201ENST00000376836 SPG7Q9UQ90 795 aa36.58■■■■□ 3.45
COMMD3-201ENST00000376836 BCL11BQ9C0K0 894 aaPredicted RBP36.57■■■■□ 3.44
COMMD3-201ENST00000376836 PCDH11XQ9BZA7 1347 aa36.55■■■■□ 3.44
COMMD3-201ENST00000376836 PCDH11YQ9BZA8 1340 aa36.55■■■■□ 3.44
COMMD3-201ENST00000376836 PPP2R1AP30153 589 aa36.55■■■■□ 3.44
COMMD3-201ENST00000376836 ZNF316A6NFI3 1004 aaPredicted RBP36.54■■■■□ 3.44
COMMD3-201ENST00000376836 EN1Q05925 392 aaPredicted RBP36.53■■■■□ 3.44
COMMD3-201ENST00000376836 ACSBG1Q96GR2 724 aa36.52■■■■□ 3.44
COMMD3-201ENST00000376836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.52■■■■□ 3.44
COMMD3-201ENST00000376836 SULT6B1Q6IMI4 303 aa36.51■■■■□ 3.43
COMMD3-201ENST00000376836 TNS1Q9HBL0 1735 aaKnown RBP36.49■■■■□ 3.43
COMMD3-201ENST00000376836 PLEKHG2Q9H7P9 1386 aa36.48■■■■□ 3.43
COMMD3-201ENST00000376836 SRCAPQ6ZRS2 3230 aa36.48■■■■□ 3.43
COMMD3-201ENST00000376836 RALBP1Q15311 655 aa36.47■■■■□ 3.43
COMMD3-201ENST00000376836 PLEKHO1Q53GL0 409 aaPredicted RBP36.46■■■■□ 3.43
COMMD3-201ENST00000376836 PARD3Q8TEW0 1356 aa36.46■■■■□ 3.43
COMMD3-201ENST00000376836 SBF2Q86WG5 1849 aa36.44■■■■□ 3.42
COMMD3-201ENST00000376836 U2SURPO15042 1029 aaKnown RBP36.44■■■■□ 3.42
COMMD3-201ENST00000376836 KCNQ2O43526 872 aa36.44■■■■□ 3.42
COMMD3-201ENST00000376836 AMOTQ4VCS5 1084 aa36.44■■■■□ 3.42
COMMD3-201ENST00000376836 AEBP1Q8IUX7 1158 aa36.44■■■■□ 3.42
COMMD3-201ENST00000376836 NUDCQ9Y266 331 aa36.44■■■■□ 3.42
COMMD3-201ENST00000376836 EZH2Q15910 746 aaKnown RBP36.43■■■■□ 3.42
COMMD3-201ENST00000376836 SYTL4Q96C24 671 aaPredicted RBP36.43■■■■□ 3.42
COMMD3-201ENST00000376836 CAMKK2Q96RR4 588 aa36.42■■■■□ 3.42
COMMD3-201ENST00000376836 PLSCR1O15162 318 aa36.41■■■■□ 3.42
COMMD3-201ENST00000376836 CYP27B1O15528 508 aa36.41■■■■□ 3.42
COMMD3-201ENST00000376836 PTF1AQ7RTS3 328 aa36.41■■■■□ 3.42
COMMD3-201ENST00000376836 IFNL2Q8IZJ0 200 aa36.41■■■■□ 3.42
COMMD3-201ENST00000376836 KDRP35968 1356 aa36.41■■■■□ 3.42
COMMD3-201ENST00000376836 SHANK3Q9BYB0 1731 aa36.4■■■■□ 3.42
COMMD3-201ENST00000376836 PKD1L3Q7Z443 1732 aa36.39■■■■□ 3.42
COMMD3-201ENST00000376836 HMOX1P09601 288 aa36.39■■■■□ 3.42
COMMD3-201ENST00000376836 PRIM1P49642 420 aaKnown RBP36.38■■■■□ 3.41
COMMD3-201ENST00000376836 COL3A1P02461 1466 aaPredicted RBP36.38■■■■□ 3.41
COMMD3-201ENST00000376836 NHSQ6T4R5 1651 aa36.37■■■■□ 3.41
COMMD3-201ENST00000376836 PHKG2P15735 406 aa36.35■■■■□ 3.41
COMMD3-201ENST00000376836 HSP90AB1P08238 724 aaKnown RBP36.34■■■■□ 3.41
COMMD3-201ENST00000376836 NKX1-1Q15270 411 aaPredicted RBP36.34■■■■□ 3.41
COMMD3-201ENST00000376836 C1orf141Q5JVX7 400 aa36.34■■■■□ 3.41
COMMD3-201ENST00000376836 ZNF530Q6P9A1 599 aaPredicted RBP36.34■■■■□ 3.41
COMMD3-201ENST00000376836 KAT6BQ8WYB5 2073 aa36.3■■■■□ 3.4
COMMD3-201ENST00000376836 MYBBP1AQ9BQG0 1328 aaKnown RBP36.29■■■■□ 3.4
COMMD3-201ENST00000376836 U2AF1L5P0DN76 240 aaPredicted RBP36.29■■■■□ 3.4
COMMD3-201ENST00000376836 U2AF1Q01081 240 aaKnown RBP eCLIP36.29■■■■□ 3.4
COMMD3-201ENST00000376836 DOT1LQ8TEK3 1739 aa36.28■■■■□ 3.4
COMMD3-201ENST00000376836 NBPF14Q5TI25 921 aa36.28■■■■□ 3.4
COMMD3-201ENST00000376836 MPRIPQ6WCQ1 1025 aa36.26■■■■□ 3.39
COMMD3-201ENST00000376836 DCAF5Q96JK2 942 aa36.25■■■■□ 3.39
COMMD3-201ENST00000376836 RGPD3A6NKT7 1758 aaPredicted RBP36.24■■■■□ 3.39
COMMD3-201ENST00000376836 RGPD4Q7Z3J3 1758 aa36.24■■■■□ 3.39
COMMD3-201ENST00000376836 TXNRD1Q16881 649 aa36.24■■■■□ 3.39
COMMD3-201ENST00000376836 PRKRIP1Q9H875 184 aaPredicted RBP36.23■■■■□ 3.39
COMMD3-201ENST00000376836 BTAF1O14981 1849 aa36.22■■■■□ 3.39
COMMD3-201ENST00000376836 TMOD3Q9NYL9 352 aa36.22■■■■□ 3.39
COMMD3-201ENST00000376836 AKAP4Q5JQC9 854 aa36.21■■■■□ 3.39
COMMD3-201ENST00000376836 FCHSD2O94868 740 aa36.2■■■■□ 3.39
COMMD3-201ENST00000376836 ERVV-2B6SEH9 535 aa36.18■■■■□ 3.38
COMMD3-201ENST00000376836 PRKAR2BP31323 418 aa36.18■■■■□ 3.38
COMMD3-201ENST00000376836 MTHFSDQ2M296 383 aaKnown RBP36.18■■■■□ 3.38
COMMD3-201ENST00000376836 PROM2Q8N271 834 aa36.18■■■■□ 3.38
COMMD3-201ENST00000376836 RREB1Q92766 1687 aa36.18■■■■□ 3.38
COMMD3-201ENST00000376836 GAS2L2Q8NHY3 880 aa36.17■■■■□ 3.38
COMMD3-201ENST00000376836 RSPH6AQ9H0K4 717 aa36.17■■■■□ 3.38
COMMD3-201ENST00000376836 NEFMP07197 916 aa36.16■■■■□ 3.38
COMMD3-201ENST00000376836 SLC27A3Q5K4L6 730 aa36.16■■■■□ 3.38
COMMD3-201ENST00000376836 PIGBQ92521 554 aa36.15■■■■□ 3.38
COMMD3-201ENST00000376836 SMARCC1Q92922 1105 aaPredicted RBP36.15■■■■□ 3.38
COMMD3-201ENST00000376836 CABP4P57796 275 aa36.14■■■■□ 3.38
COMMD3-201ENST00000376836 PNNQ9H307 717 aaKnown RBP36.13■■■■□ 3.37
COMMD3-201ENST00000376836 R3HDM1Q15032 1099 aaKnown RBP36.12■■■■□ 3.37
COMMD3-201ENST00000376836 TOGARAM1Q9Y4F4 1720 aa36.12■■■■□ 3.37
COMMD3-201ENST00000376836 NUP188Q5SRE5 1749 aa36.11■■■■□ 3.37
COMMD3-201ENST00000376836 PSDA5PKW4 1024 aaPredicted RBP36.1■■■■□ 3.37
COMMD3-201ENST00000376836 HMGB2P26583 209 aaKnown RBP36.1■■■■□ 3.37
COMMD3-201ENST00000376836 STK32BQ9NY57 414 aa36.08■■■■□ 3.37
COMMD3-201ENST00000376836 CCNL1Q9UK58 526 aaPredicted RBP36.08■■■■□ 3.37
COMMD3-201ENST00000376836 KDM6AO15550 1401 aaPredicted RBP36.08■■■■□ 3.37
COMMD3-201ENST00000376836 ANP32CO43423 234 aa36.08■■■■□ 3.37
COMMD3-201ENST00000376836 PALLDQ8WX93 1383 aa36.07■■■■□ 3.37
COMMD3-201ENST00000376836 ITGB4P16144 1822 aa36.07■■■■□ 3.37
COMMD3-201ENST00000376836 PHACTR3Q96KR7 559 aa36.07■■■■□ 3.36
COMMD3-201ENST00000376836 GNAT3A8MTJ3 354 aa36.06■■■■□ 3.36
COMMD3-201ENST00000376836 RNMTO43148 476 aaKnown RBP36.04■■■■□ 3.36
COMMD3-201ENST00000376836 WDR43Q15061 677 aaKnown RBP eCLIP36.04■■■■□ 3.36
COMMD3-201ENST00000376836 LRRC4BQ9NT99 713 aa36.04■■■■□ 3.36
COMMD3-201ENST00000376836 MAP3K5Q99683 1374 aa36.03■■■■□ 3.36
COMMD3-201ENST00000376836 NFATC2IPQ8NCF5 419 aa36.03■■■■□ 3.36
COMMD3-201ENST00000376836 LGR6Q9HBX8 967 aa36.03■■■■□ 3.36
COMMD3-201ENST00000376836 ASAP1Q9ULH1 1129 aa36.02■■■■□ 3.36
COMMD3-201ENST00000376836 MAPK8IP3Q9UPT6 1336 aa36■■■■□ 3.35
COMMD3-201ENST00000376836 SLC15A2Q16348 729 aa36■■■■□ 3.35
COMMD3-201ENST00000376836 ANO8Q9HCE9 1232 aaPredicted RBP36■■■■□ 3.35
COMMD3-201ENST00000376836 ATG3Q9NT62 314 aa36■■■■□ 3.35
COMMD3-201ENST00000376836 KCNQ4P56696 695 aa35.99■■■■□ 3.35
COMMD3-201ENST00000376836 RTF1Q92541 710 aaKnown RBP35.99■■■■□ 3.35
COMMD3-201ENST00000376836 SLC52A2Q9HAB3 445 aa35.99■■■■□ 3.35
COMMD3-201ENST00000376836 LY75O60449 1722 aa35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms