RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 ZCRB1Q8TBF4 217 aaKnown RBP24.42■■□□□ 1.5
HLA-A-201ENST00000376802 AKT1S1Q96B36 256 aa24.42■■□□□ 1.5
HLA-A-201ENST00000376802 QSER1Q2KHR3 1735 aa24.42■■□□□ 1.5
HLA-A-201ENST00000376802 NSD2O96028 1365 aa24.41■■□□□ 1.5
HLA-A-201ENST00000376802 FHDC1Q9C0D6 1143 aaPredicted RBP24.41■■□□□ 1.5
HLA-A-201ENST00000376802 UTRNP46939 3433 aa24.41■■□□□ 1.5
HLA-A-201ENST00000376802 DCAF8L1A6NGE4 600 aa24.4■■□□□ 1.5
HLA-A-201ENST00000376802 SLC27A3Q5K4L6 730 aa24.4■■□□□ 1.5
HLA-A-201ENST00000376802 SYT17Q9BSW7 474 aa24.4■■□□□ 1.5
HLA-A-201ENST00000376802 TUBGCP6Q96RT7 1819 aa24.4■■□□□ 1.5
HLA-A-201ENST00000376802 CARD14Q9BXL6 1004 aa24.39■■□□□ 1.5
HLA-A-201ENST00000376802 KCNQ4P56696 695 aa24.38■■□□□ 1.49
HLA-A-201ENST00000376802 USHBP1Q8N6Y0 703 aa24.38■■□□□ 1.49
HLA-A-201ENST00000376802 SYTL4Q96C24 671 aaPredicted RBP24.38■■□□□ 1.49
HLA-A-201ENST00000376802 COL24A1Q17RW2 1714 aa24.37■■□□□ 1.49
HLA-A-201ENST00000376802 CDCA8Q53HL2 280 aa24.37■■□□□ 1.49
HLA-A-201ENST00000376802 HSP90AB2PQ58FF8 381 aa24.37■■□□□ 1.49
HLA-A-201ENST00000376802 INSRP06213 1382 aa24.37■■□□□ 1.49
HLA-A-201ENST00000376802 CGNL1Q0VF96 1302 aa24.35■■□□□ 1.49
HLA-A-201ENST00000376802 ARXQ96QS3 562 aa24.35■■□□□ 1.49
HLA-A-201ENST00000376802 PNPLA7Q6ZV29 1317 aa24.34■■□□□ 1.49
HLA-A-201ENST00000376802 SMG6Q86US8 1419 aaKnown RBP24.33■■□□□ 1.49
HLA-A-201ENST00000376802 FLT4P35916 1363 aa24.32■■□□□ 1.48
HLA-A-201ENST00000376802 KIF24Q5T7B8 1368 aa24.32■■□□□ 1.48
HLA-A-201ENST00000376802 RAPGEF4Q8WZA2 1011 aa24.32■■□□□ 1.48
HLA-A-201ENST00000376802 TIMELESSQ9UNS1 1208 aa24.32■■□□□ 1.48
HLA-A-201ENST00000376802 MAP3K5Q99683 1374 aa24.31■■□□□ 1.48
HLA-A-201ENST00000376802 SLC16A10Q8TF71 515 aa24.31■■□□□ 1.48
HLA-A-201ENST00000376802 NSD3Q9BZ95 1437 aa24.31■■□□□ 1.48
HLA-A-201ENST00000376802 TATP17735 454 aaPredicted RBP24.3■■□□□ 1.48
HLA-A-201ENST00000376802 EMILIN1Q9Y6C2 1016 aa24.3■■□□□ 1.48
HLA-A-201ENST00000376802 ANKRD26Q9UPS8 1709 aa24.3■■□□□ 1.48
HLA-A-201ENST00000376802 MAP2P11137 1827 aaKnown RBP24.29■■□□□ 1.48
HLA-A-201ENST00000376802 TFCP2L1Q9NZI6 479 aa24.29■■□□□ 1.48
HLA-A-201ENST00000376802 CHD4Q14839 1912 aa24.28■■□□□ 1.48
HLA-A-201ENST00000376802 CCNL1Q9UK58 526 aaPredicted RBP24.28■■□□□ 1.48
HLA-A-201ENST00000376802 ITGB4P16144 1822 aa24.27■■□□□ 1.48
HLA-A-201ENST00000376802 PKD1L3Q7Z443 1732 aa24.26■■□□□ 1.47
HLA-A-201ENST00000376802 PCDH11XQ9BZA7 1347 aa24.26■■□□□ 1.47
HLA-A-201ENST00000376802 PCDH11YQ9BZA8 1340 aa24.26■■□□□ 1.47
HLA-A-201ENST00000376802 NCAPD2Q15021 1401 aa24.25■■□□□ 1.47
HLA-A-201ENST00000376802 TOGARAM1Q9Y4F4 1720 aa24.25■■□□□ 1.47
HLA-A-201ENST00000376802 CYP27B1O15528 508 aa24.25■■□□□ 1.47
HLA-A-201ENST00000376802 TAF1LQ8IZX4 1826 aa24.25■■□□□ 1.47
HLA-A-201ENST00000376802 C5P01031 1676 aa24.24■■□□□ 1.47
HLA-A-201ENST00000376802 CLSPNQ9HAW4 1339 aa24.23■■□□□ 1.47
HLA-A-201ENST00000376802 GOLGB1Q14789 3259 aaKnown RBP24.22■■□□□ 1.47
HLA-A-201ENST00000376802 POLD1P28340 1107 aa24.21■■□□□ 1.47
HLA-A-201ENST00000376802 COL23A1Q86Y22 540 aaPredicted RBP24.21■■□□□ 1.47
HLA-A-201ENST00000376802 WASHC2AQ641Q2 1341 aa24.2■■□□□ 1.47
HLA-A-201ENST00000376802 PPM1GO15355 546 aaPredicted RBP24.2■■□□□ 1.46
HLA-A-201ENST00000376802 MPRIPQ6WCQ1 1025 aa24.19■■□□□ 1.46
HLA-A-201ENST00000376802 ZNF784Q8NCA9 323 aaPredicted RBP24.19■■□□□ 1.46
HLA-A-201ENST00000376802 PCGF6Q9BYE7 350 aa24.19■■□□□ 1.46
HLA-A-201ENST00000376802 EYA1Q99502 592 aa24.18■■□□□ 1.46
HLA-A-201ENST00000376802 POLKQ9UBT6 870 aa24.18■■□□□ 1.46
HLA-A-201ENST00000376802 PALLDQ8WX93 1383 aa24.18■■□□□ 1.46
HLA-A-201ENST00000376802 NKX1-1Q15270 411 aaPredicted RBP24.16■■□□□ 1.46
HLA-A-201ENST00000376802 KLHL34Q8N239 644 aa24.15■■□□□ 1.46
HLA-A-201ENST00000376802 MSH5O43196 834 aa24.14■■□□□ 1.46
HLA-A-201ENST00000376802 GPR162Q16538 588 aa24.14■■□□□ 1.46
HLA-A-201ENST00000376802 NLGN2Q8NFZ4 835 aa24.14■■□□□ 1.46
HLA-A-201ENST00000376802 PIGBQ92521 554 aa24.14■■□□□ 1.46
HLA-A-201ENST00000376802 SPG7Q9UQ90 795 aa24.13■■□□□ 1.45
HLA-A-201ENST00000376802 C4BP0C0L5 1744 aa24.13■■□□□ 1.45
HLA-A-201ENST00000376802 MSL1Q68DK7 614 aa24.11■■□□□ 1.45
HLA-A-201ENST00000376802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.11■■□□□ 1.45
HLA-A-201ENST00000376802 UBR3Q6ZT12 1888 aa24.11■■□□□ 1.45
HLA-A-201ENST00000376802 AMIGO3Q86WK7 504 aa24.1■■□□□ 1.45
HLA-A-201ENST00000376802 SMARCC1Q92922 1105 aaPredicted RBP24.1■■□□□ 1.45
HLA-A-201ENST00000376802 POLR3GLQ9BT43 218 aa24.1■■□□□ 1.45
HLA-A-201ENST00000376802 TNNT2P45379 298 aaPredicted RBP24.1■■□□□ 1.45
HLA-A-201ENST00000376802 EIF4A2Q14240 407 aaKnown RBP24.1■■□□□ 1.45
HLA-A-201ENST00000376802 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
HLA-A-201ENST00000376802 HMGB2P26583 209 aaKnown RBP24.08■■□□□ 1.44
HLA-A-201ENST00000376802 EIF4G2P78344 907 aaKnown RBP eCLIP24.08■■□□□ 1.44
HLA-A-201ENST00000376802 FLAD1Q8NFF5 587 aa24.08■■□□□ 1.44
HLA-A-201ENST00000376802 PHKG2P15735 406 aa24.07■■□□□ 1.44
HLA-A-201ENST00000376802 SMIM5Q71RC9 77 aa24.06■■□□□ 1.44
HLA-A-201ENST00000376802 PELP1Q8IZL8 1130 aaKnown RBP24.06■■□□□ 1.44
HLA-A-201ENST00000376802 PANK3Q9H999 370 aa24.06■■□□□ 1.44
HLA-A-201ENST00000376802 LOC102724428A0A0B4J2F2 783 aa24.05■■□□□ 1.44
HLA-A-201ENST00000376802 YBX3P16989 372 aaKnown RBP eCLIP24.05■■□□□ 1.44
HLA-A-201ENST00000376802 SIK1P57059 783 aa24.05■■□□□ 1.44
HLA-A-201ENST00000376802 IFNL2Q8IZJ0 200 aa24.05■■□□□ 1.44
HLA-A-201ENST00000376802 ASAP1Q9ULH1 1129 aa24.05■■□□□ 1.44
HLA-A-201ENST00000376802 TMOD3Q9NYL9 352 aa24.04■■□□□ 1.44
HLA-A-201ENST00000376802 IGSF1Q8N6C5 1336 aa24.03■■□□□ 1.44
HLA-A-201ENST00000376802 LINC00116Q8NCU8 138 aa24.03■■□□□ 1.44
HLA-A-201ENST00000376802 AK7Q96M32 723 aa24.03■■□□□ 1.44
HLA-A-201ENST00000376802 PLEKHG2Q9H7P9 1386 aa24.02■■□□□ 1.44
HLA-A-201ENST00000376802 ITPK1Q13572 414 aa24.01■■□□□ 1.43
HLA-A-201ENST00000376802 CD2APQ9Y5K6 639 aa24.01■■□□□ 1.43
HLA-A-201ENST00000376802 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24■■□□□ 1.43
HLA-A-201ENST00000376802 ATG3Q9NT62 314 aa24■■□□□ 1.43
HLA-A-201ENST00000376802 PHF14O94880 888 aa23.99■■□□□ 1.43
HLA-A-201ENST00000376802 SSFA2P28290 1259 aa23.98■■□□□ 1.43
HLA-A-201ENST00000376802 ATP6V1AP38606 617 aa23.97■■□□□ 1.43
HLA-A-201ENST00000376802 GRIN3BO60391 1043 aa23.96■■□□□ 1.43
HLA-A-201ENST00000376802 ZNF831Q5JPB2 1677 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms