RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ATF5Q9Y2D1 282 aaPredicted RBP20.44■□□□□ 0.86
HDAC6-204ENST00000376643 PAPPAQ13219 1627 aa20.44■□□□□ 0.86
HDAC6-204ENST00000376643 PCDH11XQ9BZA7 1347 aa20.43■□□□□ 0.86
HDAC6-204ENST00000376643 PCDH11YQ9BZA8 1340 aa20.43■□□□□ 0.86
HDAC6-204ENST00000376643 NSD3Q9BZ95 1437 aa20.43■□□□□ 0.86
HDAC6-204ENST00000376643 MEGF6O75095 1541 aa20.43■□□□□ 0.86
HDAC6-204ENST00000376643 PRIM1P49642 420 aaKnown RBP20.42■□□□□ 0.86
HDAC6-204ENST00000376643 NBPF6Q5VWK0 638 aa20.42■□□□□ 0.86
HDAC6-204ENST00000376643 NBPF4Q96M43 638 aa20.42■□□□□ 0.86
HDAC6-204ENST00000376643 PDGFDQ9GZP0 370 aaPredicted RBP20.42■□□□□ 0.86
HDAC6-204ENST00000376643 FBLN1P23142 703 aa20.41■□□□□ 0.86
HDAC6-204ENST00000376643 MYOM1P52179 1685 aa20.39■□□□□ 0.86
HDAC6-204ENST00000376643 POLD1P28340 1107 aa20.39■□□□□ 0.85
HDAC6-204ENST00000376643 HSP90AB2PQ58FF8 381 aa20.39■□□□□ 0.85
HDAC6-204ENST00000376643 AKT1S1Q96B36 256 aa20.39■□□□□ 0.85
HDAC6-204ENST00000376643 ARXQ96QS3 562 aa20.39■□□□□ 0.85
HDAC6-204ENST00000376643 PCGF6Q9BYE7 350 aa20.39■□□□□ 0.85
HDAC6-204ENST00000376643 LRRC4BQ9NT99 713 aa20.39■□□□□ 0.85
HDAC6-204ENST00000376643 TFCP2L1Q9NZI6 479 aa20.39■□□□□ 0.85
HDAC6-204ENST00000376643 MAP3K5Q99683 1374 aa20.38■□□□□ 0.85
HDAC6-204ENST00000376643 ZNF827Q17R98 1081 aa20.38■□□□□ 0.85
HDAC6-204ENST00000376643 DOT1LQ8TEK3 1739 aa20.38■□□□□ 0.85
HDAC6-204ENST00000376643 SGIP1Q9BQI5 828 aa20.37■□□□□ 0.85
HDAC6-204ENST00000376643 SYT17Q9BSW7 474 aa20.37■□□□□ 0.85
HDAC6-204ENST00000376643 CARD14Q9BXL6 1004 aa20.37■□□□□ 0.85
HDAC6-204ENST00000376643 FHDC1Q9C0D6 1143 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-204ENST00000376643 CCNL1Q9UK58 526 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-204ENST00000376643 NSD2O96028 1365 aa20.36■□□□□ 0.85
HDAC6-204ENST00000376643 USHBP1Q8N6Y0 703 aa20.36■□□□□ 0.85
HDAC6-204ENST00000376643 QSER1Q2KHR3 1735 aa20.36■□□□□ 0.85
HDAC6-204ENST00000376643 EIF4G2P78344 907 aaKnown RBP eCLIP20.35■□□□□ 0.85
HDAC6-204ENST00000376643 RGPD2P0DJD1 1756 aa20.34■□□□□ 0.85
HDAC6-204ENST00000376643 SHANK3Q9BYB0 1731 aa20.34■□□□□ 0.85
HDAC6-204ENST00000376643 SPG7Q9UQ90 795 aa20.34■□□□□ 0.85
HDAC6-204ENST00000376643 WASHC2AQ641Q2 1341 aa20.33■□□□□ 0.85
HDAC6-204ENST00000376643 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.85
HDAC6-204ENST00000376643 SMARCC1Q92922 1105 aaPredicted RBP20.33■□□□□ 0.85
HDAC6-204ENST00000376643 LY75O60449 1722 aa20.33■□□□□ 0.84
HDAC6-204ENST00000376643 PLEKHG2Q9H7P9 1386 aa20.33■□□□□ 0.84
HDAC6-204ENST00000376643 FLAD1Q8NFF5 587 aa20.32■□□□□ 0.84
HDAC6-204ENST00000376643 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
HDAC6-204ENST00000376643 PNPLA7Q6ZV29 1317 aa20.31■□□□□ 0.84
HDAC6-204ENST00000376643 NCAPD2Q15021 1401 aa20.31■□□□□ 0.84
HDAC6-204ENST00000376643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.31■□□□□ 0.841e-11■■□□□ 11.5
HDAC6-204ENST00000376643 POLR3GLQ9BT43 218 aa20.3■□□□□ 0.84
HDAC6-204ENST00000376643 ANKRD26Q9UPS8 1709 aa20.3■□□□□ 0.84
HDAC6-204ENST00000376643 PALLDQ8WX93 1383 aa20.28■□□□□ 0.84
HDAC6-204ENST00000376643 MPRIPQ6WCQ1 1025 aa20.27■□□□□ 0.84
HDAC6-204ENST00000376643 CCER1Q8TC90 406 aaPredicted RBP20.27■□□□□ 0.84
HDAC6-204ENST00000376643 CYP27B1O15528 508 aa20.26■□□□□ 0.83
HDAC6-204ENST00000376643 MSH5O43196 834 aa20.26■□□□□ 0.83
HDAC6-204ENST00000376643 NKX1-1Q15270 411 aaPredicted RBP20.26■□□□□ 0.83
HDAC6-204ENST00000376643 POLKQ9UBT6 870 aa20.26■□□□□ 0.83
HDAC6-204ENST00000376643 PKD1L3Q7Z443 1732 aa20.26■□□□□ 0.83
HDAC6-204ENST00000376643 KCNQ4P56696 695 aa20.24■□□□□ 0.83
HDAC6-204ENST00000376643 IFNL2Q8IZJ0 200 aa20.24■□□□□ 0.83
HDAC6-204ENST00000376643 KLHL34Q8N239 644 aa20.24■□□□□ 0.83
HDAC6-204ENST00000376643 EYA1Q99502 592 aa20.24■□□□□ 0.83
HDAC6-204ENST00000376643 GPR162Q16538 588 aa20.23■□□□□ 0.83
HDAC6-204ENST00000376643 COL24A1Q17RW2 1714 aa20.23■□□□□ 0.83
HDAC6-204ENST00000376643 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
HDAC6-204ENST00000376643 AK7Q96M32 723 aa20.22■□□□□ 0.83
HDAC6-204ENST00000376643 TMOD3Q9NYL9 352 aa20.22■□□□□ 0.83
HDAC6-204ENST00000376643 MAP2P11137 1827 aaKnown RBP20.21■□□□□ 0.83
HDAC6-204ENST00000376643 HSP90AB1P08238 724 aaKnown RBP20.21■□□□□ 0.83
HDAC6-204ENST00000376643 C5P01031 1676 aa20.21■□□□□ 0.83
HDAC6-204ENST00000376643 COL23A1Q86Y22 540 aaPredicted RBP20.2■□□□□ 0.82
HDAC6-204ENST00000376643 PANK3Q9H999 370 aa20.2■□□□□ 0.82
HDAC6-204ENST00000376643 TUBGCP6Q96RT7 1819 aa20.19■□□□□ 0.82
HDAC6-204ENST00000376643 TNNT2P45379 298 aaPredicted RBP20.19■□□□□ 0.82
HDAC6-204ENST00000376643 EIF4A2Q14240 407 aaKnown RBP20.19■□□□□ 0.82
HDAC6-204ENST00000376643 PIGBQ92521 554 aa20.19■□□□□ 0.82
HDAC6-204ENST00000376643 PHKG2P15735 406 aa20.18■□□□□ 0.82
HDAC6-204ENST00000376643 LOC102724428A0A0B4J2F2 783 aa20.17■□□□□ 0.82
HDAC6-204ENST00000376643 SIK1P57059 783 aa20.17■□□□□ 0.82
HDAC6-204ENST00000376643 AMOTQ4VCS5 1084 aa20.17■□□□□ 0.82
HDAC6-204ENST00000376643 KNSTRNQ9Y448 316 aa20.17■□□□□ 0.82
HDAC6-204ENST00000376643 IGSF1Q8N6C5 1336 aa20.17■□□□□ 0.82
HDAC6-204ENST00000376643 GRIN3BO60391 1043 aa20.16■□□□□ 0.82
HDAC6-204ENST00000376643 PLEKHO1Q53GL0 409 aaPredicted RBP20.16■□□□□ 0.82
HDAC6-204ENST00000376643 MORC1Q86VD1 984 aa20.16■□□□□ 0.82
HDAC6-204ENST00000376643 TOGARAM1Q9Y4F4 1720 aa20.16■□□□□ 0.82
HDAC6-204ENST00000376643 CHD4Q14839 1912 aa20.15■□□□□ 0.82
HDAC6-204ENST00000376643 SSFA2P28290 1259 aa20.15■□□□□ 0.82
HDAC6-204ENST00000376643 ZNF784Q8NCA9 323 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-204ENST00000376643 CD2APQ9Y5K6 639 aa20.15■□□□□ 0.82
HDAC6-204ENST00000376643 C4BP0C0L5 1744 aa20.15■□□□□ 0.82
HDAC6-204ENST00000376643 ITGB4P16144 1822 aa20.15■□□□□ 0.82
HDAC6-204ENST00000376643 ERVV-2B6SEH9 535 aa20.14■□□□□ 0.81
HDAC6-204ENST00000376643 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.81
HDAC6-204ENST00000376643 DCAF5Q96JK2 942 aa20.14■□□□□ 0.81
HDAC6-204ENST00000376643 TAF1LQ8IZX4 1826 aa20.13■□□□□ 0.81
HDAC6-204ENST00000376643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.11■□□□□ 0.81
HDAC6-204ENST00000376643 ATP6V1AP38606 617 aa20.11■□□□□ 0.81
HDAC6-204ENST00000376643 MSL1Q68DK7 614 aa20.11■□□□□ 0.81
HDAC6-204ENST00000376643 C1orf141Q5JVX7 400 aa20.1■□□□□ 0.81
HDAC6-204ENST00000376643 PHF14O94880 888 aa20.09■□□□□ 0.81
HDAC6-204ENST00000376643 NLGN2Q8NFZ4 835 aa20.09■□□□□ 0.81
HDAC6-204ENST00000376643 ASAP1Q9ULH1 1129 aa20.09■□□□□ 0.81
HDAC6-204ENST00000376643 GNPATO15228 680 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms