RNA–Protein interactions for RNA: ENST00000376497.7

CLCN6-207, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 3 BASIC

Gene CLCN6, Length 814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-207ENST00000376497 TUBGCP6Q96RT7 1819 aa21.49■■□□□ 1.03
CLCN6-207ENST00000376497 RTL1A6NKG5 1358 aa21.48■■□□□ 1.03
CLCN6-207ENST00000376497 ZCRB1Q8TBF4 217 aaKnown RBP21.48■■□□□ 1.03
CLCN6-207ENST00000376497 MEGF6O75095 1541 aa21.47■■□□□ 1.03
CLCN6-207ENST00000376497 FYB1O15117 783 aa21.47■■□□□ 1.03
CLCN6-207ENST00000376497 PRIM1P49642 420 aaKnown RBP21.47■■□□□ 1.03
CLCN6-207ENST00000376497 NSD2O96028 1365 aa21.47■■□□□ 1.03
CLCN6-207ENST00000376497 UTRNP46939 3433 aa21.46■■□□□ 1.03
CLCN6-207ENST00000376497 TMF1P82094 1093 aa21.46■■□□□ 1.03
CLCN6-207ENST00000376497 SYTL4Q96C24 671 aaPredicted RBP21.45■■□□□ 1.02
CLCN6-207ENST00000376497 PNPLA7Q6ZV29 1317 aa21.45■■□□□ 1.02
CLCN6-207ENST00000376497 RRS1Q15050 365 aaKnown RBP21.44■■□□□ 1.02
CLCN6-207ENST00000376497 NBPF6Q5VWK0 638 aa21.44■■□□□ 1.02
CLCN6-207ENST00000376497 NBPF4Q96M43 638 aa21.44■■□□□ 1.02
CLCN6-207ENST00000376497 GGNBP2Q9H3C7 697 aa21.44■■□□□ 1.02
CLCN6-207ENST00000376497 CGNL1Q0VF96 1302 aa21.44■■□□□ 1.02
CLCN6-207ENST00000376497 KIF20BQ96Q89 1820 aa21.43■■□□□ 1.02
CLCN6-207ENST00000376497 PCGF6Q9BYE7 350 aa21.43■■□□□ 1.02
CLCN6-207ENST00000376497 KCNQ4P56696 695 aa21.42■■□□□ 1.02
CLCN6-207ENST00000376497 ZNF784Q8NCA9 323 aaPredicted RBP21.42■■□□□ 1.02
CLCN6-207ENST00000376497 TFCP2L1Q9NZI6 479 aa21.42■■□□□ 1.02
CLCN6-207ENST00000376497 USP47Q96K76 1375 aa21.41■■□□□ 1.02
CLCN6-207ENST00000376497 SMG6Q86US8 1419 aaKnown RBP21.4■■□□□ 1.02
CLCN6-207ENST00000376497 POLD1P28340 1107 aa21.4■■□□□ 1.02
CLCN6-207ENST00000376497 INSRP06213 1382 aa21.39■■□□□ 1.02
CLCN6-207ENST00000376497 RAPGEF4Q8WZA2 1011 aa21.39■■□□□ 1.01
CLCN6-207ENST00000376497 KIF24Q5T7B8 1368 aa21.38■■□□□ 1.01
CLCN6-207ENST00000376497 CDCA8Q53HL2 280 aa21.38■■□□□ 1.01
CLCN6-207ENST00000376497 USHBP1Q8N6Y0 703 aa21.38■■□□□ 1.01
CLCN6-207ENST00000376497 CCNL1Q9UK58 526 aaPredicted RBP21.38■■□□□ 1.01
CLCN6-207ENST00000376497 TATP17735 454 aaPredicted RBP21.37■■□□□ 1.01
CLCN6-207ENST00000376497 HSP90AB2PQ58FF8 381 aa21.37■■□□□ 1.01
CLCN6-207ENST00000376497 FLT4P35916 1363 aa21.36■■□□□ 1.01
CLCN6-207ENST00000376497 TAF1LQ8IZX4 1826 aa21.35■■□□□ 1.01
CLCN6-207ENST00000376497 GPR162Q16538 588 aa21.35■■□□□ 1.01
CLCN6-207ENST00000376497 PCDH11XQ9BZA7 1347 aa21.34■■□□□ 1.01
CLCN6-207ENST00000376497 PCDH11YQ9BZA8 1340 aa21.34■■□□□ 1.01
CLCN6-207ENST00000376497 C5P01031 1676 aa21.34■■□□□ 1.01
CLCN6-207ENST00000376497 ITGB4P16144 1822 aa21.34■■□□□ 1.01
CLCN6-207ENST00000376497 KLHL34Q8N239 644 aa21.33■■□□□ 1.01
CLCN6-207ENST00000376497 HMGB2P26583 209 aaKnown RBP21.32■■□□□ 1
CLCN6-207ENST00000376497 COL23A1Q86Y22 540 aaPredicted RBP21.32■■□□□ 1
CLCN6-207ENST00000376497 CARD14Q9BXL6 1004 aa21.32■■□□□ 1
CLCN6-207ENST00000376497 PKD1L3Q7Z443 1732 aa21.31■■□□□ 1
CLCN6-207ENST00000376497 MAP2P11137 1827 aaKnown RBP21.3■■□□□ 1
CLCN6-207ENST00000376497 ANKRD26Q9UPS8 1709 aa21.29■■□□□ 1
CLCN6-207ENST00000376497 TOGARAM1Q9Y4F4 1720 aa21.29■■□□□ 1
CLCN6-207ENST00000376497 CYP27B1O15528 508 aa21.29■■□□□ 1
CLCN6-207ENST00000376497 NLGN2Q8NFZ4 835 aa21.29■■□□□ 1
CLCN6-207ENST00000376497 NCAPD2Q15021 1401 aa21.29■■□□□ 1
CLCN6-207ENST00000376497 NSD3Q9BZ95 1437 aa21.29■■□□□ 1
CLCN6-207ENST00000376497 MSH5O43196 834 aa21.28■■□□□ 1
CLCN6-207ENST00000376497 EMILIN1Q9Y6C2 1016 aa21.28■■□□□ 1
CLCN6-207ENST00000376497 PALLDQ8WX93 1383 aa21.27■■□□□ 1
CLCN6-207ENST00000376497 MPRIPQ6WCQ1 1025 aa21.27■■□□□ 1
CLCN6-207ENST00000376497 FLAD1Q8NFF5 587 aa21.26■□□□□ 0.99
CLCN6-207ENST00000376497 TIMELESSQ9UNS1 1208 aa21.26■□□□□ 0.99
CLCN6-207ENST00000376497 C4BP0C0L5 1744 aa21.25■□□□□ 0.99
CLCN6-207ENST00000376497 NKX1-1Q15270 411 aaPredicted RBP21.25■□□□□ 0.99
CLCN6-207ENST00000376497 PELP1Q8IZL8 1130 aaKnown RBP21.25■□□□□ 0.99
CLCN6-207ENST00000376497 WASHC2AQ641Q2 1341 aa21.25■□□□□ 0.99
CLCN6-207ENST00000376497 SMARCC1Q92922 1105 aaPredicted RBP21.24■□□□□ 0.99
CLCN6-207ENST00000376497 C1QTNF8P60827 252 aa21.23■□□□□ 0.99
CLCN6-207ENST00000376497 UBR3Q6ZT12 1888 aa21.23■□□□□ 0.99
CLCN6-207ENST00000376497 GOLGB1Q14789 3259 aaKnown RBP21.23■□□□□ 0.99
CLCN6-207ENST00000376497 GRIN3BO60391 1043 aa21.22■□□□□ 0.99
CLCN6-207ENST00000376497 MSL1Q68DK7 614 aa21.22■□□□□ 0.99
CLCN6-207ENST00000376497 SPG7Q9UQ90 795 aa21.22■□□□□ 0.99
CLCN6-207ENST00000376497 YBX3P16989 372 aaKnown RBP eCLIP21.21■□□□□ 0.99
CLCN6-207ENST00000376497 PIGBQ92521 554 aa21.21■□□□□ 0.99
CLCN6-207ENST00000376497 PPM1GO15355 546 aaPredicted RBP21.2■□□□□ 0.98
CLCN6-207ENST00000376497 EYA1Q99502 592 aa21.2■□□□□ 0.98
CLCN6-207ENST00000376497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.2■□□□□ 0.982e-9■■□□□ 12.1
CLCN6-207ENST00000376497 CD2APQ9Y5K6 639 aa21.2■□□□□ 0.98
CLCN6-207ENST00000376497 CLSPNQ9HAW4 1339 aa21.19■□□□□ 0.98
CLCN6-207ENST00000376497 CCER1Q8TC90 406 aaPredicted RBP21.18■□□□□ 0.98
CLCN6-207ENST00000376497 AK7Q96M32 723 aa21.18■□□□□ 0.98
CLCN6-207ENST00000376497 POLKQ9UBT6 870 aa21.18■□□□□ 0.98
CLCN6-207ENST00000376497 AMIGO3Q86WK7 504 aa21.17■□□□□ 0.98
CLCN6-207ENST00000376497 SENP3-EIF4A1A0A087X0R7 540 aa21.15■□□□□ 0.98
CLCN6-207ENST00000376497 LOC102724428A0A0B4J2F2 783 aa21.15■□□□□ 0.98
CLCN6-207ENST00000376497 GIGYF1O75420 1035 aaPredicted RBP21.15■□□□□ 0.98
CLCN6-207ENST00000376497 SIK1P57059 783 aa21.15■□□□□ 0.98
CLCN6-207ENST00000376497 IFNL2Q8IZJ0 200 aa21.15■□□□□ 0.98
CLCN6-207ENST00000376497 PLEKHG2Q9H7P9 1386 aa21.14■□□□□ 0.98
CLCN6-207ENST00000376497 PHKG2P15735 406 aa21.14■□□□□ 0.97
CLCN6-207ENST00000376497 TMOD3Q9NYL9 352 aa21.14■□□□□ 0.97
CLCN6-207ENST00000376497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.13■□□□□ 0.97
CLCN6-207ENST00000376497 SSFA2P28290 1259 aa21.13■□□□□ 0.97
CLCN6-207ENST00000376497 LINC00116Q8NCU8 138 aa21.13■□□□□ 0.97
CLCN6-207ENST00000376497 EIF4A2Q14240 407 aaKnown RBP21.12■□□□□ 0.97
CLCN6-207ENST00000376497 ASAP1Q9ULH1 1129 aa21.12■□□□□ 0.97
CLCN6-207ENST00000376497 PHF14O94880 888 aa21.11■□□□□ 0.97
CLCN6-207ENST00000376497 SMIM5Q71RC9 77 aa21.11■□□□□ 0.97
CLCN6-207ENST00000376497 ATP6V1AP38606 617 aa21.09■□□□□ 0.97
CLCN6-207ENST00000376497 ITPK1Q13572 414 aa21.09■□□□□ 0.97
CLCN6-207ENST00000376497 ATG3Q9NT62 314 aa21.09■□□□□ 0.97
CLCN6-207ENST00000376497 ZNF831Q5JPB2 1677 aa21.09■□□□□ 0.97
CLCN6-207ENST00000376497 POLR3GLQ9BT43 218 aa21.08■□□□□ 0.97
CLCN6-207ENST00000376497 IGSF1Q8N6C5 1336 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms