RNA–Protein interactions for RNA: ENST00000375638.7

C6orf48-203, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-203ENST00000375638 TRIM37O94972 964 aa23.47■■□□□ 1.35
C6orf48-203ENST00000375638 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
C6orf48-203ENST00000375638 BCL9O00512 1426 aa23.44■■□□□ 1.34
C6orf48-203ENST00000375638 AEBP1Q8IUX7 1158 aa23.44■■□□□ 1.34
C6orf48-203ENST00000375638 SPG7Q9UQ90 795 aa23.44■■□□□ 1.34
C6orf48-203ENST00000375638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.43■■□□□ 1.34
C6orf48-203ENST00000375638 PCDH11XQ9BZA7 1347 aa23.42■■□□□ 1.34
C6orf48-203ENST00000375638 PCDH11YQ9BZA8 1340 aa23.42■■□□□ 1.34
C6orf48-203ENST00000375638 U2SURPO15042 1029 aaKnown RBP23.42■■□□□ 1.34
C6orf48-203ENST00000375638 COL3A1P02461 1466 aaPredicted RBP23.42■■□□□ 1.34
C6orf48-203ENST00000375638 NUDCQ9Y266 331 aa23.41■■□□□ 1.34
C6orf48-203ENST00000375638 KDRP35968 1356 aa23.4■■□□□ 1.34
C6orf48-203ENST00000375638 BAG6P46379 1132 aa23.4■■□□□ 1.34
C6orf48-203ENST00000375638 BCL11BQ9C0K0 894 aaPredicted RBP23.4■■□□□ 1.34
C6orf48-203ENST00000375638 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
C6orf48-203ENST00000375638 APBA3O96018 575 aa23.39■■□□□ 1.33
C6orf48-203ENST00000375638 HMOX1P09601 288 aa23.39■■□□□ 1.33
C6orf48-203ENST00000375638 PLEKHO1Q53GL0 409 aaPredicted RBP23.39■■□□□ 1.33
C6orf48-203ENST00000375638 DEFB132Q7Z7B7 95 aa23.39■■□□□ 1.33
C6orf48-203ENST00000375638 MYBBP1AQ9BQG0 1328 aaKnown RBP23.38■■□□□ 1.33
C6orf48-203ENST00000375638 CYP27B1O15528 508 aa23.38■■□□□ 1.33
C6orf48-203ENST00000375638 ACSBG1Q96GR2 724 aa23.38■■□□□ 1.33
C6orf48-203ENST00000375638 PRKRIP1Q9H875 184 aaPredicted RBP23.38■■□□□ 1.33
C6orf48-203ENST00000375638 RGPD1P0DJD0 1748 aa23.37■■□□□ 1.33
C6orf48-203ENST00000375638 AMOTQ4VCS5 1084 aa23.37■■□□□ 1.33
C6orf48-203ENST00000375638 KCNQ2O43526 872 aa23.36■■□□□ 1.33
C6orf48-203ENST00000375638 PTF1AQ7RTS3 328 aa23.35■■□□□ 1.33
C6orf48-203ENST00000375638 IFNL2Q8IZJ0 200 aa23.35■■□□□ 1.33
C6orf48-203ENST00000375638 U2AF1L5P0DN76 240 aaPredicted RBP23.34■■□□□ 1.33
C6orf48-203ENST00000375638 U2AF1Q01081 240 aaKnown RBP eCLIP23.34■■□□□ 1.33
C6orf48-203ENST00000375638 EN1Q05925 392 aaPredicted RBP23.34■■□□□ 1.33
C6orf48-203ENST00000375638 PHKG2P15735 406 aa23.33■■□□□ 1.33
C6orf48-203ENST00000375638 PRIM1P49642 420 aaKnown RBP23.32■■□□□ 1.32
C6orf48-203ENST00000375638 NKX1-1Q15270 411 aaPredicted RBP23.32■■□□□ 1.32
C6orf48-203ENST00000375638 ZNF530Q6P9A1 599 aaPredicted RBP23.32■■□□□ 1.32
C6orf48-203ENST00000375638 SYTL4Q96C24 671 aaPredicted RBP23.32■■□□□ 1.32
C6orf48-203ENST00000375638 PKD1L3Q7Z443 1732 aa23.32■■□□□ 1.32
C6orf48-203ENST00000375638 SHANK3Q9BYB0 1731 aa23.32■■□□□ 1.32
C6orf48-203ENST00000375638 SBF2Q86WG5 1849 aa23.29■■□□□ 1.32
C6orf48-203ENST00000375638 PLSCR1O15162 318 aa23.29■■□□□ 1.32
C6orf48-203ENST00000375638 C1orf141Q5JVX7 400 aa23.29■■□□□ 1.32
C6orf48-203ENST00000375638 CAMKK2Q96RR4 588 aa23.29■■□□□ 1.32
C6orf48-203ENST00000375638 TNS1Q9HBL0 1735 aaKnown RBP23.29■■□□□ 1.32
C6orf48-203ENST00000375638 FCHSD2O94868 740 aa23.28■■□□□ 1.32
C6orf48-203ENST00000375638 HSP90AB1P08238 724 aaKnown RBP23.28■■□□□ 1.32
C6orf48-203ENST00000375638 EZH2Q15910 746 aaKnown RBP23.28■■□□□ 1.32
C6orf48-203ENST00000375638 KAT6BQ8WYB5 2073 aa23.28■■□□□ 1.32
C6orf48-203ENST00000375638 ANP32CO43423 234 aa23.27■■□□□ 1.32
C6orf48-203ENST00000375638 PRKAR2BP31323 418 aa23.27■■□□□ 1.32
C6orf48-203ENST00000375638 RSPH6AQ9H0K4 717 aa23.27■■□□□ 1.32
C6orf48-203ENST00000375638 NHSQ6T4R5 1651 aa23.25■■□□□ 1.31
C6orf48-203ENST00000375638 MTHFSDQ2M296 383 aaKnown RBP23.25■■□□□ 1.31
C6orf48-203ENST00000375638 DCAF5Q96JK2 942 aa23.25■■□□□ 1.31
C6orf48-203ENST00000375638 AKAP4Q5JQC9 854 aa23.24■■□□□ 1.31
C6orf48-203ENST00000375638 MPRIPQ6WCQ1 1025 aa23.24■■□□□ 1.31
C6orf48-203ENST00000375638 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
C6orf48-203ENST00000375638 PHACTR3Q96KR7 559 aa23.22■■□□□ 1.31
C6orf48-203ENST00000375638 ERVV-2B6SEH9 535 aa23.21■■□□□ 1.31
C6orf48-203ENST00000375638 TMOD3Q9NYL9 352 aa23.21■■□□□ 1.31
C6orf48-203ENST00000375638 DOT1LQ8TEK3 1739 aa23.21■■□□□ 1.31
C6orf48-203ENST00000375638 NEFMP07197 916 aa23.2■■□□□ 1.3
C6orf48-203ENST00000375638 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.3
C6orf48-203ENST00000375638 TXNRD1Q16881 649 aa23.19■■□□□ 1.3
C6orf48-203ENST00000375638 PIGBQ92521 554 aa23.19■■□□□ 1.3
C6orf48-203ENST00000375638 WDR43Q15061 677 aaKnown RBP eCLIP23.18■■□□□ 1.37e-40■□□□□ 10.9
C6orf48-203ENST00000375638 PROM2Q8N271 834 aa23.18■■□□□ 1.3
C6orf48-203ENST00000375638 KDM6AO15550 1401 aaPredicted RBP23.17■■□□□ 1.3
C6orf48-203ENST00000375638 CABP4P57796 275 aa23.17■■□□□ 1.3
C6orf48-203ENST00000375638 BTAF1O14981 1849 aa23.17■■□□□ 1.3
C6orf48-203ENST00000375638 GNAT3A8MTJ3 354 aa23.15■■□□□ 1.3
C6orf48-203ENST00000375638 SMARCC1Q92922 1105 aaPredicted RBP23.15■■□□□ 1.3
C6orf48-203ENST00000375638 PLEKHF1Q96S99 279 aa23.15■■□□□ 1.3
C6orf48-203ENST00000375638 LGR6Q9HBX8 967 aa23.15■■□□□ 1.3
C6orf48-203ENST00000375638 MAP3K5Q99683 1374 aa23.14■■□□□ 1.3
C6orf48-203ENST00000375638 TOGARAM1Q9Y4F4 1720 aa23.14■■□□□ 1.3
C6orf48-203ENST00000375638 RNMTO43148 476 aaKnown RBP23.14■■□□□ 1.29
C6orf48-203ENST00000375638 NBPF14Q5TI25 921 aa23.14■■□□□ 1.29
C6orf48-203ENST00000375638 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
C6orf48-203ENST00000375638 SLC27A3Q5K4L6 730 aa23.13■■□□□ 1.29
C6orf48-203ENST00000375638 NFATC2IPQ8NCF5 419 aa23.13■■□□□ 1.29
C6orf48-203ENST00000375638 RGPD3A6NKT7 1758 aaPredicted RBP23.13■■□□□ 1.29
C6orf48-203ENST00000375638 RGPD4Q7Z3J3 1758 aa23.13■■□□□ 1.29
C6orf48-203ENST00000375638 ASAP1Q9ULH1 1129 aa23.11■■□□□ 1.29
C6orf48-203ENST00000375638 ADAMTS8Q9UP79 889 aa23.11■■□□□ 1.29
C6orf48-203ENST00000375638 PALLDQ8WX93 1383 aa23.11■■□□□ 1.29
C6orf48-203ENST00000375638 CCDC184Q52MB2 194 aa23.1■■□□□ 1.29
C6orf48-203ENST00000375638 IL17REQ8NFR9 667 aa23.1■■□□□ 1.29
C6orf48-203ENST00000375638 RTF1Q92541 710 aaKnown RBP23.1■■□□□ 1.29
C6orf48-203ENST00000375638 SLC52A2Q9HAB3 445 aa23.1■■□□□ 1.29
C6orf48-203ENST00000375638 ATG3Q9NT62 314 aa23.1■■□□□ 1.29
C6orf48-203ENST00000375638 CCNL1Q9UK58 526 aaPredicted RBP23.1■■□□□ 1.29
C6orf48-203ENST00000375638 ITGB4P16144 1822 aa23.1■■□□□ 1.29
C6orf48-203ENST00000375638 MRS2Q9HD23 443 aa23.09■■□□□ 1.29
C6orf48-203ENST00000375638 LRRC4BQ9NT99 713 aa23.09■■□□□ 1.29
C6orf48-203ENST00000375638 NFE2L2Q16236 605 aa23.08■■□□□ 1.29
C6orf48-203ENST00000375638 RREB1Q92766 1687 aa23.08■■□□□ 1.29
C6orf48-203ENST00000375638 HTATSF1O43719 755 aaKnown RBP23.07■■□□□ 1.28
C6orf48-203ENST00000375638 KCNQ4P56696 695 aa23.07■■□□□ 1.28
C6orf48-203ENST00000375638 TEFQ10587 303 aa23.06■■□□□ 1.28
C6orf48-203ENST00000375638 R3HDM1Q15032 1099 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms