RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 COL18A1P39060 1754 aa24.87■■□□□ 1.57
NECAB3-202ENST00000375238 MCM10Q7L590 875 aa24.86■■□□□ 1.57
NECAB3-202ENST00000375238 IPO9Q96P70 1041 aaKnown RBP24.86■■□□□ 1.57
NECAB3-202ENST00000375238 ROBO1Q9Y6N7 1651 aa24.86■■□□□ 1.57
NECAB3-202ENST00000375238 ZNF853P0CG23 659 aa24.85■■□□□ 1.57
NECAB3-202ENST00000375238 RTF1Q92541 710 aaKnown RBP24.85■■□□□ 1.57
NECAB3-202ENST00000375238 CFAP44Q96MT7 982 aa24.85■■□□□ 1.57
NECAB3-202ENST00000375238 CAMTA1Q9Y6Y1 1673 aa24.85■■□□□ 1.57
NECAB3-202ENST00000375238 NOP58Q9Y2X3 529 aaKnown RBP24.84■■□□□ 1.57
NECAB3-202ENST00000375238 ERBB3P21860 1342 aa24.84■■□□□ 1.57
NECAB3-202ENST00000375238 KIAA0232Q92628 1395 aa24.84■■□□□ 1.57
NECAB3-202ENST00000375238 ABCC6O95255 1503 aa24.84■■□□□ 1.57
NECAB3-202ENST00000375238 CHRNA2Q15822 529 aa24.83■■□□□ 1.57
NECAB3-202ENST00000375238 MBIPQ9NS73 344 aa24.83■■□□□ 1.57
NECAB3-202ENST00000375238 CPDO75976 1380 aa24.83■■□□□ 1.57
NECAB3-202ENST00000375238 ABCA3Q99758 1704 aa24.83■■□□□ 1.57
NECAB3-202ENST00000375238 NCAPD2Q15021 1401 aa24.82■■□□□ 1.56
NECAB3-202ENST00000375238 CANXP27824 592 aaKnown RBP24.82■■□□□ 1.56
NECAB3-202ENST00000375238 HAP1P54257 671 aaPredicted RBP24.82■■□□□ 1.56
NECAB3-202ENST00000375238 BCL2L13Q9BXK5 485 aa24.82■■□□□ 1.56
NECAB3-202ENST00000375238 GNAT3A8MTJ3 354 aa24.8■■□□□ 1.56
NECAB3-202ENST00000375238 FRAT1Q92837 279 aaPredicted RBP24.8■■□□□ 1.56
NECAB3-202ENST00000375238 MAP3K5Q99683 1374 aa24.79■■□□□ 1.56
NECAB3-202ENST00000375238 HTATSF1O43719 755 aaKnown RBP24.79■■□□□ 1.56
NECAB3-202ENST00000375238 PANK1Q8TE04 598 aa24.79■■□□□ 1.56
NECAB3-202ENST00000375238 LMO7Q8WWI1 1683 aa24.78■■□□□ 1.56
NECAB3-202ENST00000375238 FAM208AQ9UK61 1670 aaKnown RBP24.78■■□□□ 1.56
NECAB3-202ENST00000375238 CRB1P82279 1406 aa24.78■■□□□ 1.56
NECAB3-202ENST00000375238 CSB-PGBD3P0DP91 1061 aa24.78■■□□□ 1.56
NECAB3-202ENST00000375238 NLRP2Q9NX02 1062 aa24.78■■□□□ 1.56
NECAB3-202ENST00000375238 PRDM11Q9NQV5 511 aa24.77■■□□□ 1.56
NECAB3-202ENST00000375238 SMC4Q9NTJ3 1288 aa24.77■■□□□ 1.56
NECAB3-202ENST00000375238 AHDC1Q5TGY3 1603 aaPredicted RBP24.76■■□□□ 1.55
NECAB3-202ENST00000375238 COG6Q9Y2V7 657 aa24.76■■□□□ 1.55
NECAB3-202ENST00000375238 LRRC37A3O60309 1634 aa24.76■■□□□ 1.55
NECAB3-202ENST00000375238 CHL1O00533 1208 aa24.75■■□□□ 1.55
NECAB3-202ENST00000375238 PLEKHO1Q53GL0 409 aaPredicted RBP24.75■■□□□ 1.55
NECAB3-202ENST00000375238 SSH1Q8WYL5 1049 aa24.74■■□□□ 1.55
NECAB3-202ENST00000375238 IGHDP01880 384 aa24.74■■□□□ 1.55
NECAB3-202ENST00000375238 AMOTQ4VCS5 1084 aa24.73■■□□□ 1.55
NECAB3-202ENST00000375238 TSPYL6Q8N831 410 aa24.73■■□□□ 1.55
NECAB3-202ENST00000375238 CLUAP1Q96AJ1 413 aa24.73■■□□□ 1.55
NECAB3-202ENST00000375238 ELL2O00472 640 aaPredicted RBP24.72■■□□□ 1.55
NECAB3-202ENST00000375238 ZNF530Q6P9A1 599 aaPredicted RBP24.72■■□□□ 1.55
NECAB3-202ENST00000375238 ZNF428Q96B54 188 aa24.72■■□□□ 1.55
NECAB3-202ENST00000375238 VAMP4O75379 141 aa24.71■■□□□ 1.55
NECAB3-202ENST00000375238 RLBP1P12271 317 aa24.71■■□□□ 1.55
NECAB3-202ENST00000375238 TWISTNBQ3B726 338 aaPredicted RBP24.71■■□□□ 1.55
NECAB3-202ENST00000375238 ALDH1L2Q3SY69 923 aa24.71■■□□□ 1.55
NECAB3-202ENST00000375238 NPM2Q86SE8 214 aaKnown RBP24.71■■□□□ 1.55
NECAB3-202ENST00000375238 C8orf58Q8NAV2 365 aa24.71■■□□□ 1.55
NECAB3-202ENST00000375238 IL17REQ8NFR9 667 aa24.71■■□□□ 1.55
NECAB3-202ENST00000375238 TNNQ9UQP3 1299 aa24.71■■□□□ 1.55
NECAB3-202ENST00000375238 ZBTB47Q9UFB7 747 aaPredicted RBP24.71■■□□□ 1.55
NECAB3-202ENST00000375238 RAPGEF4Q8WZA2 1011 aa24.7■■□□□ 1.54
NECAB3-202ENST00000375238 MIS18AQ9NYP9 233 aa24.69■■□□□ 1.54
NECAB3-202ENST00000375238 TSPYL4Q9UJ04 414 aa24.69■■□□□ 1.54
NECAB3-202ENST00000375238 AKAP4Q5JQC9 854 aa24.69■■□□□ 1.54
NECAB3-202ENST00000375238 ZKSCAN2Q63HK3 967 aa24.69■■□□□ 1.54
NECAB3-202ENST00000375238 AAMPQ13685 434 aa24.68■■□□□ 1.54
NECAB3-202ENST00000375238 C1orf141Q5JVX7 400 aa24.68■■□□□ 1.54
NECAB3-202ENST00000375238 PHLPP1O60346 1717 aa24.67■■□□□ 1.54
NECAB3-202ENST00000375238 TOM1O60784 492 aa24.67■■□□□ 1.54
NECAB3-202ENST00000375238 AEBP2Q6ZN18 517 aaPredicted RBP24.67■■□□□ 1.54
NECAB3-202ENST00000375238 TATP17735 454 aaPredicted RBP24.66■■□□□ 1.54
NECAB3-202ENST00000375238 KIF16BQ96L93 1317 aa24.66■■□□□ 1.54
NECAB3-202ENST00000375238 VIRMAQ69YN4 1812 aaKnown RBP24.65■■□□□ 1.54
NECAB3-202ENST00000375238 COL5A2P05997 1499 aaPredicted RBP24.65■■□□□ 1.54
NECAB3-202ENST00000375238 C8orf34Q49A92 452 aa24.65■■□□□ 1.54
NECAB3-202ENST00000375238 COL22A1Q8NFW1 1626 aaPredicted RBP24.65■■□□□ 1.54
NECAB3-202ENST00000375238 CEMIPQ8WUJ3 1361 aa24.65■■□□□ 1.54
NECAB3-202ENST00000375238 WDR17Q8IZU2 1322 aa24.65■■□□□ 1.54
NECAB3-202ENST00000375238 KRT24Q2M2I5 525 aa24.65■■□□□ 1.54
NECAB3-202ENST00000375238 FAM161AQ3B820 660 aa24.65■■□□□ 1.54
NECAB3-202ENST00000375238 NOB1Q9ULX3 412 aaKnown RBP24.65■■□□□ 1.54
NECAB3-202ENST00000375238 MEGF6O75095 1541 aa24.64■■□□□ 1.54
NECAB3-202ENST00000375238 RGS3P49796 1198 aa24.63■■□□□ 1.53
NECAB3-202ENST00000375238 PIP4K2BP78356 416 aa24.63■■□□□ 1.53
NECAB3-202ENST00000375238 TAF7Q15545 349 aaPredicted RBP24.63■■□□□ 1.53
NECAB3-202ENST00000375238 LGR6Q9HBX8 967 aa24.63■■□□□ 1.53
NECAB3-202ENST00000375238 MPRIPQ6WCQ1 1025 aa24.63■■□□□ 1.53
NECAB3-202ENST00000375238 TOM1L2Q6ZVM7 507 aa24.63■■□□□ 1.53
NECAB3-202ENST00000375238 FTSJ3Q8IY81 847 aaKnown RBP24.63■■□□□ 1.53
NECAB3-202ENST00000375238 IPO8O15397 1037 aaKnown RBP24.62■■□□□ 1.53
NECAB3-202ENST00000375238 ATF7IPQ6VMQ6 1270 aa24.62■■□□□ 1.53
NECAB3-202ENST00000375238 PCDHB15Q9Y5E8 787 aa24.62■■□□□ 1.53
NECAB3-202ENST00000375238 COL16A1Q07092 1604 aaPredicted RBP24.62■■□□□ 1.53
NECAB3-202ENST00000375238 BRPF1P55201 1214 aaPredicted RBP24.61■■□□□ 1.53
NECAB3-202ENST00000375238 DZIP1LQ8IYY4 767 aaKnown RBP24.61■■□□□ 1.53
NECAB3-202ENST00000375238 MRPL50Q8N5N7 158 aaKnown RBP24.61■■□□□ 1.53
NECAB3-202ENST00000375238 TRIM27P14373 513 aa24.61■■□□□ 1.53
NECAB3-202ENST00000375238 BABAM1Q9NWV8 329 aa24.61■■□□□ 1.53
NECAB3-202ENST00000375238 SPG7Q9UQ90 795 aa24.61■■□□□ 1.53
NECAB3-202ENST00000375238 STRN4Q9NRL3 753 aa24.6■■□□□ 1.53
NECAB3-202ENST00000375238 EVA1CP58658 441 aa24.59■■□□□ 1.53
NECAB3-202ENST00000375238 RNMTO43148 476 aaKnown RBP24.59■■□□□ 1.53
NECAB3-202ENST00000375238 TEFQ10587 303 aa24.59■■□□□ 1.53
NECAB3-202ENST00000375238 MVPQ14764 893 aaKnown RBP24.59■■□□□ 1.53
NECAB3-202ENST00000375238 PLEKHG2Q9H7P9 1386 aa24.59■■□□□ 1.53
NECAB3-202ENST00000375238 PKD1L3Q7Z443 1732 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms