RNA–Protein interactions for RNA: ENST00000374736.7

ABCA1-202, Transcript of ATP binding cassette subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA1, Length 10,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-202ENST00000374736 DAAM1Q9Y4D1 1078 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.24□□□□□ -0.77
ABCA1-202ENST00000374736 ZC4H2Q9NQZ6 224 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 APLFQ8IW19 511 aaPredicted RBP10.24□□□□□ -0.77
ABCA1-202ENST00000374736 GFM2Q969S9 779 aaKnown RBP10.24□□□□□ -0.77
ABCA1-202ENST00000374736 ATAD2Q6PL18 1390 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 RWDD2BP57060 319 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 DYNC1I2Q13409 638 aaKnown RBP10.24□□□□□ -0.77
ABCA1-202ENST00000374736 EFCAB13Q8IY85 973 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 MRFAP1L1Q96HT8 127 aa10.24□□□□□ -0.77
ABCA1-202ENST00000374736 CREB3O43889 395 aa10.23□□□□□ -0.77
ABCA1-202ENST00000374736 TRIM63Q969Q1 353 aa10.23□□□□□ -0.77
ABCA1-202ENST00000374736 TROVE2P10155 538 aaKnown RBP eCLIP10.23□□□□□ -0.77
ABCA1-202ENST00000374736 MED4Q9NPJ6 270 aa10.23□□□□□ -0.77
ABCA1-202ENST00000374736 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
ABCA1-202ENST00000374736 NBPF10Q6P3W6 841 aaKnown RBP10.23□□□□□ -0.77
ABCA1-202ENST00000374736 FAM177A1Q8N128 213 aaPredicted RBP10.23□□□□□ -0.77
ABCA1-202ENST00000374736 LMAN1P49257 510 aa10.23□□□□□ -0.77
ABCA1-202ENST00000374736 CALR3Q96L12 384 aaKnown RBP10.23□□□□□ -0.77
ABCA1-202ENST00000374736 TRIM4Q9C037 500 aa10.23□□□□□ -0.77
ABCA1-202ENST00000374736 CCDC171Q6TFL3 1326 aa10.23□□□□□ -0.77
ABCA1-202ENST00000374736 MYCNP04198 464 aaPredicted RBP10.22□□□□□ -0.77
ABCA1-202ENST00000374736 SFSWAPQ12872 951 aaKnown RBP10.22□□□□□ -0.77
ABCA1-202ENST00000374736 CCDC57Q2TAC2 916 aa10.22□□□□□ -0.77
ABCA1-202ENST00000374736 POLE3Q9NRF9 147 aa10.22□□□□□ -0.77
ABCA1-202ENST00000374736 PPFIA2O75334 1257 aa10.22□□□□□ -0.77
ABCA1-202ENST00000374736 BTN2A1Q7KYR7 527 aa10.22□□□□□ -0.77
ABCA1-202ENST00000374736 P3H3Q8IVL6 736 aa10.22□□□□□ -0.77
ABCA1-202ENST00000374736 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
ABCA1-202ENST00000374736 MYZAPP0CAP1 466 aa10.22□□□□□ -0.77
ABCA1-202ENST00000374736 SPC24Q8NBT2 197 aa10.22□□□□□ -0.77
ABCA1-202ENST00000374736 CCDC102AQ96A19 550 aa10.22□□□□□ -0.77
ABCA1-202ENST00000374736 TSNAXIP1Q2TAA8 658 aa10.21□□□□□ -0.77
ABCA1-202ENST00000374736 ARMC2Q8NEN0 867 aa10.21□□□□□ -0.77
ABCA1-202ENST00000374736 GOLGA5Q8TBA6 731 aa10.21□□□□□ -0.77
ABCA1-202ENST00000374736 CCDC110Q8TBZ0 833 aa10.21□□□□□ -0.77
ABCA1-202ENST00000374736 TAOK3Q9H2K8 898 aa10.21□□□□□ -0.77
ABCA1-202ENST00000374736 MIS18AQ9NYP9 233 aa10.21□□□□□ -0.77
ABCA1-202ENST00000374736 PRPF4BQ13523 1007 aaKnown RBP10.21□□□□□ -0.77
ABCA1-202ENST00000374736 MYRIPQ8NFW9 859 aa10.21□□□□□ -0.77
ABCA1-202ENST00000374736 NRDE2Q9H7Z3 1164 aa10.21□□□□□ -0.77
ABCA1-202ENST00000374736 PFDN1O60925 122 aa10.21□□□□□ -0.78
ABCA1-202ENST00000374736 WDHD1O75717 1129 aaPredicted RBP10.21□□□□□ -0.78
ABCA1-202ENST00000374736 PAK3O75914 559 aaPredicted RBP10.21□□□□□ -0.78
ABCA1-202ENST00000374736 MCTP2Q6DN12 878 aa10.21□□□□□ -0.78
ABCA1-202ENST00000374736 MMS22LQ6ZRQ5 1243 aa10.21□□□□□ -0.78
ABCA1-202ENST00000374736 ATICP31939 592 aa10.21□□□□□ -0.78
ABCA1-202ENST00000374736 ABCD1P33897 745 aa10.21□□□□□ -0.78
ABCA1-202ENST00000374736 BHMTQ93088 406 aa10.21□□□□□ -0.78
ABCA1-202ENST00000374736 CCDC85AQ96PX6 553 aaPredicted RBP10.21□□□□□ -0.78
ABCA1-202ENST00000374736 MYSM1Q5VVJ2 828 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 ANKRD24Q8TF21 1146 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 ARFGAP3Q9NP61 516 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 APBB1O00213 710 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.2□□□□□ -0.78
ABCA1-202ENST00000374736 LRRC43Q8N309 656 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 MAGEC2Q9UBF1 373 aaPredicted RBP10.2□□□□□ -0.78
ABCA1-202ENST00000374736 HOOK1Q9UJC3 728 aaKnown RBP10.2□□□□□ -0.78
ABCA1-202ENST00000374736 PRPHP41219 470 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 AMOTQ4VCS5 1084 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 MICALL1Q8N3F8 863 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 TSHZ1Q6ZSZ6 1077 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 CTCFLQ8NI51 663 aaPredicted RBP10.2□□□□□ -0.78
ABCA1-202ENST00000374736 ZKSCAN5Q9Y2L8 839 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 PPP1R12BO60237 982 aaPredicted RBP10.2□□□□□ -0.78
ABCA1-202ENST00000374736 BICD2Q8TD16 824 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 NEK1Q96PY6 1258 aa10.2□□□□□ -0.78
ABCA1-202ENST00000374736 CAPN2P17655 700 aa10.19□□□□□ -0.78
ABCA1-202ENST00000374736 MKL2Q9ULH7 1088 aa10.19□□□□□ -0.78
ABCA1-202ENST00000374736 TCP11Q8WWU5 503 aa10.19□□□□□ -0.78
ABCA1-202ENST00000374736 RSF1Q96T23 1441 aaPredicted RBP10.19□□□□□ -0.78
ABCA1-202ENST00000374736 TXLNAP40222 546 aa10.19□□□□□ -0.78
ABCA1-202ENST00000374736 LZICQ8WZA0 190 aa10.19□□□□□ -0.78
ABCA1-202ENST00000374736 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
ABCA1-202ENST00000374736 SMC6Q96SB8 1091 aa10.19□□□□□ -0.78
ABCA1-202ENST00000374736 C17orf50Q8WW18 174 aa10.19□□□□□ -0.78
ABCA1-202ENST00000374736 MSL3P1P0C860 447 aa10.19□□□□□ -0.78
ABCA1-202ENST00000374736 SUFUQ9UMX1 484 aa10.19□□□□□ -0.78
ABCA1-202ENST00000374736 FOXD4L6Q3SYB3 417 aaPredicted RBP10.19□□□□□ -0.78
ABCA1-202ENST00000374736 FOXD4L3Q6VB84 417 aaPredicted RBP10.19□□□□□ -0.78
ABCA1-202ENST00000374736 CCDC192P0DO97 292 aa10.18□□□□□ -0.78
ABCA1-202ENST00000374736 SMTNL1A8MU46 457 aa10.18□□□□□ -0.78
ABCA1-202ENST00000374736 YY1P25490 414 aa10.18□□□□□ -0.78
ABCA1-202ENST00000374736 CCDC174Q6PII3 467 aa10.18□□□□□ -0.78
ABCA1-202ENST00000374736 RUFY3Q7L099 469 aa10.18□□□□□ -0.78
ABCA1-202ENST00000374736 PSMA4P25789 261 aaKnown RBP10.18□□□□□ -0.78
ABCA1-202ENST00000374736 BACH2Q9BYV9 841 aa10.18□□□□□ -0.78
ABCA1-202ENST00000374736 FBF1Q8TES7 1133 aa10.18□□□□□ -0.78
ABCA1-202ENST00000374736 NOL7Q9UMY1 257 aaKnown RBP10.18□□□□□ -0.78
ABCA1-202ENST00000374736 IFFO1Q0D2I5 559 aa10.18□□□□□ -0.78
ABCA1-202ENST00000374736 TBCAO75347 108 aaKnown RBP10.18□□□□□ -0.78
ABCA1-202ENST00000374736 VCAM1P19320 739 aa10.18□□□□□ -0.78
ABCA1-202ENST00000374736 TACC1O75410 805 aa10.17□□□□□ -0.78
ABCA1-202ENST00000374736 CHMP2AO43633 222 aa10.17□□□□□ -0.78
ABCA1-202ENST00000374736 MCM4P33991 863 aa10.17□□□□□ -0.78
ABCA1-202ENST00000374736 CCDC186Q7Z3E2 898 aa10.17□□□□□ -0.78
ABCA1-202ENST00000374736 SPRYD3Q8NCJ5 442 aa10.17□□□□□ -0.78
ABCA1-202ENST00000374736 TSPYL2Q9H2G4 693 aaPredicted RBP10.17□□□□□ -0.78
ABCA1-202ENST00000374736 SPECC1L-ADORA2AF8WAN1 911 aa10.17□□□□□ -0.78
ABCA1-202ENST00000374736 PTPN14Q15678 1187 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms