RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 AEBP1Q8IUX7 1158 aa20.11■□□□□ 0.81
HSPG2-201ENST00000374673 EXOC5O00471 708 aa20.1■□□□□ 0.81
HSPG2-201ENST00000374673 KRT27Q7Z3Y8 459 aa20.09■□□□□ 0.81
HSPG2-201ENST00000374673 HMOX1P09601 288 aa20.08■□□□□ 0.81
HSPG2-201ENST00000374673 PDE3BQ13370 1112 aa20.08■□□□□ 0.81
HSPG2-201ENST00000374673 ZCRB1Q8TBF4 217 aaKnown RBP20.07■□□□□ 0.8
HSPG2-201ENST00000374673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.07■□□□□ 0.8
HSPG2-201ENST00000374673 U2AF1L5P0DN76 240 aaPredicted RBP20.06■□□□□ 0.8
HSPG2-201ENST00000374673 U2AF1Q01081 240 aaKnown RBP eCLIP20.06■□□□□ 0.8
HSPG2-201ENST00000374673 RSPH6AQ9H0K4 717 aa20.05■□□□□ 0.8
HSPG2-201ENST00000374673 FCHSD2O94868 740 aa20.04■□□□□ 0.8
HSPG2-201ENST00000374673 CCDC184Q52MB2 194 aa20.04■□□□□ 0.8
HSPG2-201ENST00000374673 SPG7Q9UQ90 795 aa20.04■□□□□ 0.8
HSPG2-201ENST00000374673 PCDH11XQ9BZA7 1347 aa20.03■□□□□ 0.8
HSPG2-201ENST00000374673 PCDH11YQ9BZA8 1340 aa20.03■□□□□ 0.8
HSPG2-201ENST00000374673 BCL9O00512 1426 aa20.03■□□□□ 0.8
HSPG2-201ENST00000374673 AMOTQ4VCS5 1084 aa20.03■□□□□ 0.8
HSPG2-201ENST00000374673 MARCH10Q8NA82 808 aaPredicted RBP20.03■□□□□ 0.8
HSPG2-201ENST00000374673 SBF2Q86WG5 1849 aa20.03■□□□□ 0.8
HSPG2-201ENST00000374673 PLEKHO1Q53GL0 409 aaPredicted RBP20.02■□□□□ 0.8
HSPG2-201ENST00000374673 PRKAR2BP31323 418 aa20.01■□□□□ 0.79
HSPG2-201ENST00000374673 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
HSPG2-201ENST00000374673 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
HSPG2-201ENST00000374673 DDX54Q8TDD1 881 aaKnown RBP20■□□□□ 0.79
HSPG2-201ENST00000374673 CYP27B1O15528 508 aa19.99■□□□□ 0.79
HSPG2-201ENST00000374673 FAM182BQ5T319 152 aa19.99■□□□□ 0.79
HSPG2-201ENST00000374673 FAM196AQ6ZSG2 479 aa19.99■□□□□ 0.79
HSPG2-201ENST00000374673 DOT1LQ8TEK3 1739 aa19.99■□□□□ 0.79
HSPG2-201ENST00000374673 VIRMAQ69YN4 1812 aaKnown RBP19.98■□□□□ 0.79
HSPG2-201ENST00000374673 PNNQ9H307 717 aaKnown RBP19.98■□□□□ 0.79
HSPG2-201ENST00000374673 NHSQ6T4R5 1651 aa19.97■□□□□ 0.79
HSPG2-201ENST00000374673 CCER2I3L3R5 266 aa19.97■□□□□ 0.79
HSPG2-201ENST00000374673 PHKG2P15735 406 aa19.97■□□□□ 0.79
HSPG2-201ENST00000374673 IFNL2Q8IZJ0 200 aa19.97■□□□□ 0.79
HSPG2-201ENST00000374673 PLEKHF1Q96S99 279 aa19.97■□□□□ 0.79
HSPG2-201ENST00000374673 TOGARAM1Q9Y4F4 1720 aa19.96■□□□□ 0.79
HSPG2-201ENST00000374673 MTHFSDQ2M296 383 aaKnown RBP19.96■□□□□ 0.79
HSPG2-201ENST00000374673 ZNF530Q6P9A1 599 aaPredicted RBP19.96■□□□□ 0.79
HSPG2-201ENST00000374673 PNISRQ8TF01 805 aaKnown RBP19.96■□□□□ 0.79
HSPG2-201ENST00000374673 ADAMTS8Q9UP79 889 aa19.96■□□□□ 0.79
HSPG2-201ENST00000374673 NKX1-1Q15270 411 aaPredicted RBP19.95■□□□□ 0.78
HSPG2-201ENST00000374673 GAS2L2Q8NHY3 880 aa19.95■□□□□ 0.78
HSPG2-201ENST00000374673 PHACTR3Q96KR7 559 aa19.95■□□□□ 0.78
HSPG2-201ENST00000374673 TNS1Q9HBL0 1735 aaKnown RBP19.95■□□□□ 0.78
HSPG2-201ENST00000374673 SCN11AQ9UI33 1791 aa19.95■□□□□ 0.78
HSPG2-201ENST00000374673 ADAMTS7Q9UKP4 1686 aa19.94■□□□□ 0.78
HSPG2-201ENST00000374673 DLG5Q8TDM6 1919 aa19.94■□□□□ 0.78
HSPG2-201ENST00000374673 NEFMP07197 916 aa19.94■□□□□ 0.78
HSPG2-201ENST00000374673 ITGB4P16144 1822 aa19.93■□□□□ 0.78
HSPG2-201ENST00000374673 AKAP4Q5JQC9 854 aa19.93■□□□□ 0.78
HSPG2-201ENST00000374673 C1orf141Q5JVX7 400 aa19.93■□□□□ 0.78
HSPG2-201ENST00000374673 MIER1Q8N108 512 aa19.93■□□□□ 0.78
HSPG2-201ENST00000374673 HSP90AB1P08238 724 aaKnown RBP19.92■□□□□ 0.78
HSPG2-201ENST00000374673 MAPK8IP3Q9UPT6 1336 aa19.92■□□□□ 0.78
HSPG2-201ENST00000374673 KAT6BQ8WYB5 2073 aa19.91■□□□□ 0.78
HSPG2-201ENST00000374673 KDM6AO15550 1401 aaPredicted RBP19.91■□□□□ 0.78
HSPG2-201ENST00000374673 RUNDC1Q96C34 613 aa19.9■□□□□ 0.78
HSPG2-201ENST00000374673 DCAF5Q96JK2 942 aa19.9■□□□□ 0.78
HSPG2-201ENST00000374673 MAP3K5Q99683 1374 aa19.9■□□□□ 0.78
HSPG2-201ENST00000374673 BTAF1O14981 1849 aa19.89■□□□□ 0.77
HSPG2-201ENST00000374673 TRIM37O94972 964 aa19.88■□□□□ 0.77
HSPG2-201ENST00000374673 CCDC125Q86Z20 511 aa19.88■□□□□ 0.77
HSPG2-201ENST00000374673 CCDC146Q8IYE0 955 aa19.88■□□□□ 0.77
HSPG2-201ENST00000374673 UPF1Q92900 1129 aaKnown RBP eCLIP19.88■□□□□ 0.77
HSPG2-201ENST00000374673 ACSBG1Q96GR2 724 aa19.88■□□□□ 0.77
HSPG2-201ENST00000374673 GNAT3A8MTJ3 354 aa19.87■□□□□ 0.77
HSPG2-201ENST00000374673 NFE2L2Q16236 605 aa19.87■□□□□ 0.77
HSPG2-201ENST00000374673 BCL11BQ9C0K0 894 aaPredicted RBP19.87■□□□□ 0.77
HSPG2-201ENST00000374673 MRC1P22897 1456 aa19.86■□□□□ 0.77
HSPG2-201ENST00000374673 EP400Q96L91 3159 aa19.86■□□□□ 0.77
HSPG2-201ENST00000374673 RGPD3A6NKT7 1758 aaPredicted RBP19.86■□□□□ 0.77
HSPG2-201ENST00000374673 RGPD4Q7Z3J3 1758 aa19.86■□□□□ 0.77
HSPG2-201ENST00000374673 MPRIPQ6WCQ1 1025 aa19.86■□□□□ 0.77
HSPG2-201ENST00000374673 ERVV-2B6SEH9 535 aa19.85■□□□□ 0.77
HSPG2-201ENST00000374673 KCNQ2O43526 872 aa19.85■□□□□ 0.77
HSPG2-201ENST00000374673 PRIM1P49642 420 aaKnown RBP19.85■□□□□ 0.77
HSPG2-201ENST00000374673 SIPA1L3O60292 1781 aaPredicted RBP19.85■□□□□ 0.77
HSPG2-201ENST00000374673 RNMTO43148 476 aaKnown RBP19.84■□□□□ 0.77
HSPG2-201ENST00000374673 HTATSF1O43719 755 aaKnown RBP19.84■□□□□ 0.77
HSPG2-201ENST00000374673 FAM9BQ8IZU0 186 aa19.84■□□□□ 0.77
HSPG2-201ENST00000374673 TMPOP42166 694 aaKnown RBP19.83■□□□□ 0.77
HSPG2-201ENST00000374673 PTF1AQ7RTS3 328 aa19.83■□□□□ 0.77
HSPG2-201ENST00000374673 SYTL4Q96C24 671 aaPredicted RBP19.83■□□□□ 0.77
HSPG2-201ENST00000374673 LGR6Q9HBX8 967 aa19.83■□□□□ 0.77
HSPG2-201ENST00000374673 CEMIPQ8WUJ3 1361 aa19.83■□□□□ 0.76
HSPG2-201ENST00000374673 SOCS7O14512 581 aa19.82■□□□□ 0.76
HSPG2-201ENST00000374673 SF3B2Q13435 895 aaKnown RBP19.82■□□□□ 0.76
HSPG2-201ENST00000374673 IL17REQ8NFR9 667 aa19.82■□□□□ 0.76
HSPG2-201ENST00000374673 RTF1Q92541 710 aaKnown RBP19.81■□□□□ 0.76
HSPG2-201ENST00000374673 TMOD3Q9NYL9 352 aa19.81■□□□□ 0.76
HSPG2-201ENST00000374673 LY75O60449 1722 aa19.8■□□□□ 0.76
HSPG2-201ENST00000374673 RIPK4P57078 832 aa19.8■□□□□ 0.76
HSPG2-201ENST00000374673 CABP4P57796 275 aa19.8■□□□□ 0.76
HSPG2-201ENST00000374673 PAPPAQ13219 1627 aa19.8■□□□□ 0.76
HSPG2-201ENST00000374673 APAF1O14727 1248 aa19.79■□□□□ 0.76
HSPG2-201ENST00000374673 APBA3O96018 575 aa19.79■□□□□ 0.76
HSPG2-201ENST00000374673 LMOD3Q0VAK6 560 aa19.79■□□□□ 0.76
HSPG2-201ENST00000374673 PIGBQ92521 554 aa19.79■□□□□ 0.76
HSPG2-201ENST00000374673 SLC52A2Q9HAB3 445 aa19.79■□□□□ 0.76
HSPG2-201ENST00000374673 PLSCR1O15162 318 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms