RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 AMOTL2Q9Y2J4 779 aa21.37■■□□□ 1.01
LDLRAP1-201ENST00000374338 GTF2E1P29083 439 aaPredicted RBP21.36■■□□□ 1.01
LDLRAP1-201ENST00000374338 CHD1LQ86WJ1 897 aa21.36■■□□□ 1.01
LDLRAP1-201ENST00000374338 NASPP49321 788 aaPredicted RBP21.36■■□□□ 1.01
LDLRAP1-201ENST00000374338 MED14O60244 1454 aa21.36■■□□□ 1.01
LDLRAP1-201ENST00000374338 NGDNQ8NEJ9 315 aaKnown RBP21.35■■□□□ 1.01
LDLRAP1-201ENST00000374338 CD2BP2O95400 341 aaKnown RBP21.35■■□□□ 1.01
LDLRAP1-201ENST00000374338 ALDH1L2Q3SY69 923 aa21.35■■□□□ 1.01
LDLRAP1-201ENST00000374338 CFAP44Q96MT7 982 aa21.35■■□□□ 1.01
LDLRAP1-201ENST00000374338 IFT57Q9NWB7 429 aa21.35■■□□□ 1.01
LDLRAP1-201ENST00000374338 NRXN3Q9Y4C0 1643 aa21.35■■□□□ 1.01
LDLRAP1-201ENST00000374338 ATP7BP35670 1465 aa21.34■■□□□ 1.01
LDLRAP1-201ENST00000374338 SPATA31D1Q6ZQQ2 1576 aa21.34■■□□□ 1.01
LDLRAP1-201ENST00000374338 TMEM2Q9UHN6 1383 aa21.34■■□□□ 1.01
LDLRAP1-201ENST00000374338 ZSCAN20P17040 1043 aaPredicted RBP21.34■■□□□ 1.01
LDLRAP1-201ENST00000374338 SLC4A10Q6U841 1118 aa21.34■■□□□ 1.01
LDLRAP1-201ENST00000374338 F6X3S4 739 aa21.33■■□□□ 1.01
LDLRAP1-201ENST00000374338 NUCB1Q02818 461 aa21.33■■□□□ 1.01
LDLRAP1-201ENST00000374338 DYNC1I1O14576 645 aa21.33■■□□□ 1
LDLRAP1-201ENST00000374338 SMARCA5O60264 1052 aaPredicted RBP21.32■■□□□ 1
LDLRAP1-201ENST00000374338 OTUD7AQ8TE49 926 aaPredicted RBP21.32■■□□□ 1
LDLRAP1-201ENST00000374338 RBM42Q9BTD8 480 aaKnown RBP21.32■■□□□ 1
LDLRAP1-201ENST00000374338 ZNF853P0CG23 659 aa21.32■■□□□ 1
LDLRAP1-201ENST00000374338 DDIT3P35638 169 aa21.32■■□□□ 1
LDLRAP1-201ENST00000374338 SKOR2Q2VWA4 1001 aaPredicted RBP21.32■■□□□ 1
LDLRAP1-201ENST00000374338 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
LDLRAP1-201ENST00000374338 ANKRD26Q9UPS8 1709 aa21.32■■□□□ 1
LDLRAP1-201ENST00000374338 HSP90AB1P08238 724 aaKnown RBP21.32■■□□□ 1
LDLRAP1-201ENST00000374338 HDGFP51858 240 aaKnown RBP21.32■■□□□ 1
LDLRAP1-201ENST00000374338 ANP32BQ92688 251 aaKnown RBP21.32■■□□□ 1
LDLRAP1-201ENST00000374338 USHBP1Q8N6Y0 703 aa21.31■■□□□ 1
LDLRAP1-201ENST00000374338 PDIA4P13667 645 aaKnown RBP21.3■■□□□ 1
LDLRAP1-201ENST00000374338 XPCQ01831 940 aaPredicted RBP21.3■■□□□ 1
LDLRAP1-201ENST00000374338 ZNF500O60304 480 aaPredicted RBP21.3■■□□□ 1
LDLRAP1-201ENST00000374338 SETD1AO15047 1707 aaKnown RBP21.29■■□□□ 1
LDLRAP1-201ENST00000374338 MAP3K19Q56UN5 1328 aa21.29■■□□□ 1
LDLRAP1-201ENST00000374338 G2E3Q7L622 706 aa21.29■■□□□ 1
LDLRAP1-201ENST00000374338 SSFA2P28290 1259 aa21.28■■□□□ 1
LDLRAP1-201ENST00000374338 NCBP3Q53F19 620 aaKnown RBP21.28■■□□□ 1
LDLRAP1-201ENST00000374338 CCDC94Q9BW85 323 aaPredicted RBP21.28■■□□□ 1
LDLRAP1-201ENST00000374338 AMPHP49418 695 aa21.28■■□□□ 1
LDLRAP1-201ENST00000374338 MTHFSDQ2M296 383 aaKnown RBP21.28■■□□□ 1
LDLRAP1-201ENST00000374338 SLC4A2P04920 1241 aa21.28■■□□□ 1
LDLRAP1-201ENST00000374338 NCLP19338 710 aaKnown RBP21.28■■□□□ 1
LDLRAP1-201ENST00000374338 GBP4Q96PP9 640 aa21.28■■□□□ 1
LDLRAP1-201ENST00000374338 NOL7Q9UMY1 257 aaKnown RBP21.28■■□□□ 1
LDLRAP1-201ENST00000374338 NLRP6P59044 892 aa21.27■■□□□ 1
LDLRAP1-201ENST00000374338 ZNF428Q96B54 188 aa21.27■■□□□ 1
LDLRAP1-201ENST00000374338 ADAMTS13Q76LX8 1427 aa21.27■■□□□ 1
LDLRAP1-201ENST00000374338 AGLP35573 1532 aa21.27■■□□□ 1
LDLRAP1-201ENST00000374338 PTPRUQ92729 1446 aa21.27■■□□□ 1
LDLRAP1-201ENST00000374338 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.27■■□□□ 1
LDLRAP1-201ENST00000374338 NCOA3Q9Y6Q9 1424 aa21.26■□□□□ 0.99
LDLRAP1-201ENST00000374338 HS1BP3Q53T59 392 aa21.26■□□□□ 0.99
LDLRAP1-201ENST00000374338 MEIS3Q99687 375 aa21.26■□□□□ 0.99
LDLRAP1-201ENST00000374338 EID1Q9Y6B2 187 aa21.26■□□□□ 0.99
LDLRAP1-201ENST00000374338 AK9Q5TCS8 1911 aa21.25■□□□□ 0.99
LDLRAP1-201ENST00000374338 PPP4R3BQ5MIZ7 849 aa21.25■□□□□ 0.99
LDLRAP1-201ENST00000374338 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
LDLRAP1-201ENST00000374338 TSHZ3Q63HK5 1081 aa21.25■□□□□ 0.99
LDLRAP1-201ENST00000374338 NAP1L2Q9ULW6 460 aaPredicted RBP21.25■□□□□ 0.99
LDLRAP1-201ENST00000374338 DLC1Q96QB1 1528 aa21.25■□□□□ 0.99
LDLRAP1-201ENST00000374338 DLG5Q8TDM6 1919 aa21.24■□□□□ 0.99
LDLRAP1-201ENST00000374338 CDK12Q9NYV4 1490 aaPredicted RBP21.23■□□□□ 0.99
LDLRAP1-201ENST00000374338 KCNA6P17658 529 aa21.23■□□□□ 0.99
LDLRAP1-201ENST00000374338 EYA1Q99502 592 aa21.23■□□□□ 0.99
LDLRAP1-201ENST00000374338 TSPYL4Q9UJ04 414 aa21.23■□□□□ 0.99
LDLRAP1-201ENST00000374338 DDX49Q9Y6V7 483 aaKnown RBP21.23■□□□□ 0.99
LDLRAP1-201ENST00000374338 ABCC4O15439 1325 aa21.22■□□□□ 0.99
LDLRAP1-201ENST00000374338 LMOD3Q0VAK6 560 aa21.22■□□□□ 0.99
LDLRAP1-201ENST00000374338 RAB3GAP1Q15042 981 aa21.22■□□□□ 0.99
LDLRAP1-201ENST00000374338 TBC1D9Q6ZT07 1266 aa21.22■□□□□ 0.99
LDLRAP1-201ENST00000374338 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.22■□□□□ 0.99
LDLRAP1-201ENST00000374338 PTMSP20962 102 aa21.22■□□□□ 0.99
LDLRAP1-201ENST00000374338 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
LDLRAP1-201ENST00000374338 AATKQ6ZMQ8 1374 aa21.21■□□□□ 0.99
LDLRAP1-201ENST00000374338 CHAMP1Q96JM3 812 aa21.21■□□□□ 0.99
LDLRAP1-201ENST00000374338 CIZ1Q9ULV3 898 aaPredicted RBP21.21■□□□□ 0.99
LDLRAP1-201ENST00000374338 GSPT1P15170 499 aaKnown RBP21.2■□□□□ 0.98
LDLRAP1-201ENST00000374338 SASS6Q6UVJ0 657 aa21.2■□□□□ 0.98
LDLRAP1-201ENST00000374338 RTF1Q92541 710 aaKnown RBP21.2■□□□□ 0.98
LDLRAP1-201ENST00000374338 CSPP1Q1MSJ5 1256 aa21.19■□□□□ 0.98
LDLRAP1-201ENST00000374338 GAS2L2Q8NHY3 880 aa21.19■□□□□ 0.98
LDLRAP1-201ENST00000374338 CHMP4BQ9H444 224 aaKnown RBP21.19■□□□□ 0.98
LDLRAP1-201ENST00000374338 SETD1BQ9UPS6 1966 aaKnown RBP21.19■□□□□ 0.98
LDLRAP1-201ENST00000374338 CHL1O00533 1208 aa21.19■□□□□ 0.98
LDLRAP1-201ENST00000374338 API5Q9BZZ5 524 aaKnown RBP21.19■□□□□ 0.98
LDLRAP1-201ENST00000374338 RIMS1Q86UR5 1692 aaKnown RBP21.19■□□□□ 0.98
LDLRAP1-201ENST00000374338 KIF20AO95235 890 aa21.18■□□□□ 0.98
LDLRAP1-201ENST00000374338 ABTB2Q8N961 1025 aa21.18■□□□□ 0.98
LDLRAP1-201ENST00000374338 KIF2CQ99661 725 aa21.18■□□□□ 0.98
LDLRAP1-201ENST00000374338 USP6P35125 1406 aa21.18■□□□□ 0.98
LDLRAP1-201ENST00000374338 JARID2Q92833 1246 aaPredicted RBP21.18■□□□□ 0.98
LDLRAP1-201ENST00000374338 GTPBP4Q9BZE4 634 aaKnown RBP21.18■□□□□ 0.98
LDLRAP1-201ENST00000374338 KIF13AQ9H1H9 1805 aa21.18■□□□□ 0.98
LDLRAP1-201ENST00000374338 MSH6P52701 1360 aa21.18■□□□□ 0.98
LDLRAP1-201ENST00000374338 IBTKQ9P2D0 1353 aaPredicted RBP21.18■□□□□ 0.98
LDLRAP1-201ENST00000374338 CAVIN1Q6NZI2 390 aaKnown RBP21.17■□□□□ 0.98
LDLRAP1-201ENST00000374338 PLEKHG3A1L390 1219 aa21.17■□□□□ 0.98
LDLRAP1-201ENST00000374338 ARHGAP45Q92619 1136 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms