RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 COL18A1P39060 1754 aa16.93■□□□□ 0.3
A1CF-204ENST00000373997 CALD1Q05682 793 aaKnown RBP16.93■□□□□ 0.3
A1CF-204ENST00000373997 C8orf34Q49A92 452 aa16.93■□□□□ 0.3
A1CF-204ENST00000373997 BCL2L13Q9BXK5 485 aa16.93■□□□□ 0.3
A1CF-204ENST00000373997 CAMTA1Q9Y6Y1 1673 aa16.93■□□□□ 0.3
A1CF-204ENST00000373997 RARSP54136 660 aaKnown RBP16.93■□□□□ 0.3
A1CF-204ENST00000373997 PDE3AQ14432 1141 aa16.92■□□□□ 0.3
A1CF-204ENST00000373997 MTHFSDQ2M296 383 aaKnown RBP16.92■□□□□ 0.3
A1CF-204ENST00000373997 LRRC59Q96AG4 307 aaKnown RBP16.92■□□□□ 0.3
A1CF-204ENST00000373997 CANXP27824 592 aaKnown RBP16.91■□□□□ 0.3
A1CF-204ENST00000373997 MCM10Q7L590 875 aa16.91■□□□□ 0.3
A1CF-204ENST00000373997 RTN4Q9NQC3 1192 aaKnown RBP16.91■□□□□ 0.3
A1CF-204ENST00000373997 NBPF6Q5VWK0 638 aa16.91■□□□□ 0.3
A1CF-204ENST00000373997 NBPF4Q96M43 638 aa16.91■□□□□ 0.3
A1CF-204ENST00000373997 IFT57Q9NWB7 429 aa16.91■□□□□ 0.3
A1CF-204ENST00000373997 GNAI1P63096 354 aa16.9■□□□□ 0.3
A1CF-204ENST00000373997 LRRC37A3O60309 1634 aa16.9■□□□□ 0.3
A1CF-204ENST00000373997 ROBO1Q9Y6N7 1651 aa16.9■□□□□ 0.3
A1CF-204ENST00000373997 ANKRD24Q8TF21 1146 aa16.9■□□□□ 0.3
A1CF-204ENST00000373997 FRAT1Q92837 279 aaPredicted RBP16.9■□□□□ 0.3
A1CF-204ENST00000373997 AXIN2Q9Y2T1 843 aa16.9■□□□□ 0.3
A1CF-204ENST00000373997 LTBP4Q8N2S1 1624 aa16.89■□□□□ 0.29
A1CF-204ENST00000373997 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
A1CF-204ENST00000373997 MBIPQ9NS73 344 aa16.89■□□□□ 0.29
A1CF-204ENST00000373997 FAM208AQ9UK61 1670 aaKnown RBP16.89■□□□□ 0.29
A1CF-204ENST00000373997 SOS2Q07890 1332 aaPredicted RBP16.88■□□□□ 0.29
A1CF-204ENST00000373997 CT47B1P0C2W7 299 aaPredicted RBP16.88■□□□□ 0.29
A1CF-204ENST00000373997 ZNF853P0CG23 659 aa16.88■□□□□ 0.29
A1CF-204ENST00000373997 AAMPQ13685 434 aa16.87■□□□□ 0.29
A1CF-204ENST00000373997 CFAP44Q96MT7 982 aa16.87■□□□□ 0.29
A1CF-204ENST00000373997 LMO7Q8WWI1 1683 aa16.87■□□□□ 0.29
A1CF-204ENST00000373997 RTF1Q92541 710 aaKnown RBP16.87■□□□□ 0.29
A1CF-204ENST00000373997 CHRNA2Q15822 529 aa16.86■□□□□ 0.29
A1CF-204ENST00000373997 SMC4Q9NTJ3 1288 aa16.86■□□□□ 0.29
A1CF-204ENST00000373997 KIAA0232Q92628 1395 aa16.85■□□□□ 0.29
A1CF-204ENST00000373997 ABCC6O95255 1503 aa16.85■□□□□ 0.29
A1CF-204ENST00000373997 ERBB3P21860 1342 aa16.85■□□□□ 0.29
A1CF-204ENST00000373997 MAP3K5Q99683 1374 aa16.85■□□□□ 0.29
A1CF-204ENST00000373997 CRB1P82279 1406 aa16.85■□□□□ 0.29
A1CF-204ENST00000373997 NCAPD2Q15021 1401 aa16.85■□□□□ 0.29
A1CF-204ENST00000373997 SSH1Q8WYL5 1049 aa16.84■□□□□ 0.29
A1CF-204ENST00000373997 RGS3P49796 1198 aa16.84■□□□□ 0.29
A1CF-204ENST00000373997 PANK1Q8TE04 598 aa16.84■□□□□ 0.29
A1CF-204ENST00000373997 TNNQ9UQP3 1299 aa16.84■□□□□ 0.29
A1CF-204ENST00000373997 GNAT3A8MTJ3 354 aa16.83■□□□□ 0.28
A1CF-204ENST00000373997 ELL2O00472 640 aaPredicted RBP16.83■□□□□ 0.28
A1CF-204ENST00000373997 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
A1CF-204ENST00000373997 TSPYL6Q8N831 410 aa16.83■□□□□ 0.28
A1CF-204ENST00000373997 CLUAP1Q96AJ1 413 aa16.83■□□□□ 0.28
A1CF-204ENST00000373997 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
A1CF-204ENST00000373997 CPDO75976 1380 aa16.81■□□□□ 0.28
A1CF-204ENST00000373997 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
A1CF-204ENST00000373997 C8orf58Q8NAV2 365 aa16.81■□□□□ 0.28
A1CF-204ENST00000373997 NLRP2Q9NX02 1062 aa16.81■□□□□ 0.28
A1CF-204ENST00000373997 IGHDP01880 384 aa16.8■□□□□ 0.28
A1CF-204ENST00000373997 TWISTNBQ3B726 338 aaPredicted RBP16.8■□□□□ 0.28
A1CF-204ENST00000373997 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
A1CF-204ENST00000373997 COG6Q9Y2V7 657 aa16.8■□□□□ 0.28
A1CF-204ENST00000373997 CHL1O00533 1208 aa16.79■□□□□ 0.28
A1CF-204ENST00000373997 HTATSF1O43719 755 aaKnown RBP16.79■□□□□ 0.28
A1CF-204ENST00000373997 VAMP4O75379 141 aa16.79■□□□□ 0.28
A1CF-204ENST00000373997 ZKSCAN2Q63HK3 967 aa16.79■□□□□ 0.28
A1CF-204ENST00000373997 AHDC1Q5TGY3 1603 aaPredicted RBP16.79■□□□□ 0.28
A1CF-204ENST00000373997 RLBP1P12271 317 aa16.79■□□□□ 0.28
A1CF-204ENST00000373997 KRT24Q2M2I5 525 aa16.79■□□□□ 0.28
A1CF-204ENST00000373997 ZNF530Q6P9A1 599 aaPredicted RBP16.79■□□□□ 0.28
A1CF-204ENST00000373997 PRDM11Q9NQV5 511 aa16.79■□□□□ 0.28
A1CF-204ENST00000373997 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
A1CF-204ENST00000373997 GSE1Q14687 1217 aa16.78■□□□□ 0.28
A1CF-204ENST00000373997 ALDH1L2Q3SY69 923 aa16.78■□□□□ 0.28
A1CF-204ENST00000373997 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
A1CF-204ENST00000373997 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
A1CF-204ENST00000373997 PLEKHO1Q53GL0 409 aaPredicted RBP16.78■□□□□ 0.28
A1CF-204ENST00000373997 KDM3BQ7LBC6 1761 aa16.77■□□□□ 0.28
A1CF-204ENST00000373997 KIF16BQ96L93 1317 aa16.77■□□□□ 0.28
A1CF-204ENST00000373997 IL17REQ8NFR9 667 aa16.77■□□□□ 0.28
A1CF-204ENST00000373997 NOB1Q9ULX3 412 aaKnown RBP16.77■□□□□ 0.28
A1CF-204ENST00000373997 FTSJ3Q8IY81 847 aaKnown RBP16.76■□□□□ 0.27
A1CF-204ENST00000373997 PKD1L3Q7Z443 1732 aa16.76■□□□□ 0.27
A1CF-204ENST00000373997 ZNF428Q96B54 188 aa16.76■□□□□ 0.27
A1CF-204ENST00000373997 SCN11AQ9UI33 1791 aa16.76■□□□□ 0.27
A1CF-204ENST00000373997 MEGF6O75095 1541 aa16.75■□□□□ 0.27
A1CF-204ENST00000373997 PARP4Q9UKK3 1724 aaKnown RBP16.75■□□□□ 0.27
A1CF-204ENST00000373997 SIPA1L3O60292 1781 aaPredicted RBP16.75■□□□□ 0.27
A1CF-204ENST00000373997 TRIM27P14373 513 aa16.75■□□□□ 0.27
A1CF-204ENST00000373997 AMOTQ4VCS5 1084 aa16.75■□□□□ 0.27
A1CF-204ENST00000373997 ATF7IPQ6VMQ6 1270 aa16.75■□□□□ 0.27
A1CF-204ENST00000373997 DZIP1LQ8IYY4 767 aaKnown RBP16.75■□□□□ 0.27
A1CF-204ENST00000373997 RAPGEF4Q8WZA2 1011 aa16.75■□□□□ 0.27
A1CF-204ENST00000373997 AKAP4Q5JQC9 854 aa16.74■□□□□ 0.27
A1CF-204ENST00000373997 C1orf141Q5JVX7 400 aa16.74■□□□□ 0.27
A1CF-204ENST00000373997 MRPL50Q8N5N7 158 aaKnown RBP16.74■□□□□ 0.27
A1CF-204ENST00000373997 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
A1CF-204ENST00000373997 LGR6Q9HBX8 967 aa16.73■□□□□ 0.27
A1CF-204ENST00000373997 COL5A2P05997 1499 aaPredicted RBP16.73■□□□□ 0.27
A1CF-204ENST00000373997 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
A1CF-204ENST00000373997 CACNA1FO60840 1977 aa16.73■□□□□ 0.27
A1CF-204ENST00000373997 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
A1CF-204ENST00000373997 MPRIPQ6WCQ1 1025 aa16.72■□□□□ 0.27
A1CF-204ENST00000373997 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms