RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 MEX3CQ5U5Q3 659 aaKnown RBP18.11■□□□□ 0.49
SRPK1-204ENST00000373825 TMC6Q7Z403 805 aa18.11■□□□□ 0.49
SRPK1-204ENST00000373825 ZNF215Q9UL58 517 aaPredicted RBP18.11■□□□□ 0.49
SRPK1-204ENST00000373825 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
SRPK1-204ENST00000373825 HNRNPH2P55795 449 aaKnown RBP18.1■□□□□ 0.49
SRPK1-204ENST00000373825 OLFM4Q6UX06 510 aa18.1■□□□□ 0.49
SRPK1-204ENST00000373825 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
SRPK1-204ENST00000373825 DHX29Q7Z478 1369 aaKnown RBP18.1■□□□□ 0.49
SRPK1-204ENST00000373825 DTNBO60941 627 aa18.1■□□□□ 0.49
SRPK1-204ENST00000373825 LIG1P18858 919 aa18.1■□□□□ 0.49
SRPK1-204ENST00000373825 STX6O43752 255 aa18.1■□□□□ 0.49
SRPK1-204ENST00000373825 SYNE3Q6ZMZ3 975 aa18.1■□□□□ 0.49
SRPK1-204ENST00000373825 NF2P35240 595 aa18.09■□□□□ 0.49
SRPK1-204ENST00000373825 LRMPQ12912 555 aa18.09■□□□□ 0.49
SRPK1-204ENST00000373825 RASSF8Q8NHQ8 419 aa18.09■□□□□ 0.49
SRPK1-204ENST00000373825 DNAJC25Q9H1X3 360 aa18.09■□□□□ 0.49
SRPK1-204ENST00000373825 TMEM51Q9NW97 253 aa18.09■□□□□ 0.49
SRPK1-204ENST00000373825 PYCARDQ9ULZ3 195 aa18.09■□□□□ 0.49
SRPK1-204ENST00000373825 NCOA2Q15596 1464 aa18.09■□□□□ 0.49
SRPK1-204ENST00000373825 PCMTD1Q96MG8 357 aaPredicted RBP18.09■□□□□ 0.49
SRPK1-204ENST00000373825 GNG11P61952 73 aa18.09■□□□□ 0.49
SRPK1-204ENST00000373825 CEP57Q86XR8 500 aa18.09■□□□□ 0.49
SRPK1-204ENST00000373825 ERO1AQ96HE7 468 aa18.09■□□□□ 0.49
SRPK1-204ENST00000373825 GADD45BO75293 160 aaPredicted RBP18.08■□□□□ 0.49
SRPK1-204ENST00000373825 CASQ1P31415 396 aa18.08■□□□□ 0.49
SRPK1-204ENST00000373825 FKBP5Q13451 457 aaPredicted RBP18.08■□□□□ 0.49
SRPK1-204ENST00000373825 DHX8Q14562 1220 aaKnown RBP18.08■□□□□ 0.49
SRPK1-204ENST00000373825 USP19O94966 1318 aa18.08■□□□□ 0.49
SRPK1-204ENST00000373825 LOC102724159A0A0B4J2E5 919 aa18.08■□□□□ 0.49
SRPK1-204ENST00000373825 PWP2Q15269 919 aaKnown RBP18.08■□□□□ 0.49
SRPK1-204ENST00000373825 JAKMIP1Q96N16 626 aaKnown RBP18.08■□□□□ 0.49
SRPK1-204ENST00000373825 CYP46A1Q9Y6A2 500 aa18.08■□□□□ 0.49
SRPK1-204ENST00000373825 NEMFO60524 1076 aa18.08■□□□□ 0.48
SRPK1-204ENST00000373825 NUCB1Q02818 461 aa18.08■□□□□ 0.48
SRPK1-204ENST00000373825 KIF4BQ2VIQ3 1234 aa18.08■□□□□ 0.48
SRPK1-204ENST00000373825 TSHZ3Q63HK5 1081 aa18.08■□□□□ 0.48
SRPK1-204ENST00000373825 STK11IPQ8N1F8 1099 aa18.08■□□□□ 0.48
SRPK1-204ENST00000373825 GPT2Q8TD30 523 aa18.08■□□□□ 0.48
SRPK1-204ENST00000373825 SECISBP2LQ93073 1101 aaKnown RBP18.08■□□□□ 0.48
SRPK1-204ENST00000373825 EXOC6BQ9Y2D4 811 aa18.08■□□□□ 0.48
SRPK1-204ENST00000373825 TDRD9Q8NDG6 1382 aaKnown RBP18.08■□□□□ 0.48
SRPK1-204ENST00000373825 DDX11Q96FC9 970 aa18.08■□□□□ 0.48
SRPK1-204ENST00000373825 TERF2IPQ9NYB0 399 aa18.08■□□□□ 0.48
SRPK1-204ENST00000373825 MAP2K2P36507 400 aa18.07■□□□□ 0.48
SRPK1-204ENST00000373825 TERF2Q15554 542 aa18.07■□□□□ 0.48
SRPK1-204ENST00000373825 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
SRPK1-204ENST00000373825 NAA30Q147X3 362 aaPredicted RBP18.07■□□□□ 0.48
SRPK1-204ENST00000373825 GBP6Q6ZN66 633 aa18.07■□□□□ 0.48
SRPK1-204ENST00000373825 PLEKHH2Q8IVE3 1493 aa18.07■□□□□ 0.48
SRPK1-204ENST00000373825 TWISTNBQ3B726 338 aaPredicted RBP18.06■□□□□ 0.48
SRPK1-204ENST00000373825 FAM107BQ9H098 131 aa18.06■□□□□ 0.48
SRPK1-204ENST00000373825 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
SRPK1-204ENST00000373825 CPLX1O14810 134 aa18.06■□□□□ 0.48
SRPK1-204ENST00000373825 ANKRD30BQ9BXX2 1392 aa18.06■□□□□ 0.48
SRPK1-204ENST00000373825 GNAI1P63096 354 aa18.06■□□□□ 0.48
SRPK1-204ENST00000373825 ERCC6LQ2NKX8 1250 aa18.06■□□□□ 0.48
SRPK1-204ENST00000373825 IL1RAPL2Q9NP60 686 aa18.06■□□□□ 0.48
SRPK1-204ENST00000373825 CCDC69A6NI79 296 aa18.06■□□□□ 0.48
SRPK1-204ENST00000373825 NAP1L1P55209 391 aaKnown RBP18.06■□□□□ 0.48
SRPK1-204ENST00000373825 STK38Q15208 465 aa18.06■□□□□ 0.48
SRPK1-204ENST00000373825 RABEP2Q9H5N1 569 aa18.06■□□□□ 0.48
SRPK1-204ENST00000373825 BIN1O00499 593 aa18.05■□□□□ 0.48
SRPK1-204ENST00000373825 SURF6O75683 361 aaKnown RBP18.05■□□□□ 0.48
SRPK1-204ENST00000373825 DNM1Q05193 864 aaKnown RBP18.05■□□□□ 0.48
SRPK1-204ENST00000373825 DACT1Q9NYF0 836 aa18.05■□□□□ 0.48
SRPK1-204ENST00000373825 IFIT2P09913 472 aaKnown RBP18.05■□□□□ 0.48
SRPK1-204ENST00000373825 CWC27Q6UX04 472 aaKnown RBP18.05■□□□□ 0.48
SRPK1-204ENST00000373825 SPAG9O60271 1321 aaKnown RBP18.05■□□□□ 0.48
SRPK1-204ENST00000373825 CD2BP2O95400 341 aaKnown RBP18.05■□□□□ 0.48
SRPK1-204ENST00000373825 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
SRPK1-204ENST00000373825 PDRG1Q9NUG6 133 aa18.05■□□□□ 0.48
SRPK1-204ENST00000373825 TYRO3Q06418 890 aa18.04■□□□□ 0.48
SRPK1-204ENST00000373825 HDAC1Q13547 482 aaPredicted RBP18.04■□□□□ 0.48
SRPK1-204ENST00000373825 SLC12A5Q9H2X9 1139 aa18.04■□□□□ 0.48
SRPK1-204ENST00000373825 OAS2P29728 719 aaKnown RBP18.04■□□□□ 0.48
SRPK1-204ENST00000373825 SARNPP82979 210 aaKnown RBP18.03■□□□□ 0.48
SRPK1-204ENST00000373825 C16orf71Q8IYS4 520 aaPredicted RBP18.03■□□□□ 0.48
SRPK1-204ENST00000373825 ROCK1Q13464 1354 aa18.03■□□□□ 0.48
SRPK1-204ENST00000373825 ZSCAN12O43309 604 aa18.03■□□□□ 0.48
SRPK1-204ENST00000373825 GBP2P32456 591 aaPredicted RBP18.03■□□□□ 0.48
SRPK1-204ENST00000373825 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
SRPK1-204ENST00000373825 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
SRPK1-204ENST00000373825 ATP2C2O75185 946 aa18.03■□□□□ 0.48
SRPK1-204ENST00000373825 ISM2Q6H9L7 571 aa18.03■□□□□ 0.48
SRPK1-204ENST00000373825 SART3Q15020 963 aaKnown RBP18.02■□□□□ 0.47
SRPK1-204ENST00000373825 GBP3Q9H0R5 595 aa18.02■□□□□ 0.47
SRPK1-204ENST00000373825 ZSCAN22P10073 491 aaPredicted RBP18.01■□□□□ 0.47
SRPK1-204ENST00000373825 CNTROBQ8N137 903 aa18.01■□□□□ 0.47
SRPK1-204ENST00000373825 CCDC12Q8WUD4 166 aaPredicted RBP18.01■□□□□ 0.47
SRPK1-204ENST00000373825 SCAND2PQ9GZW5 306 aaPredicted RBP18.01■□□□□ 0.47
SRPK1-204ENST00000373825 SDSP20132 328 aa18.01■□□□□ 0.47
SRPK1-204ENST00000373825 ANO10Q9NW15 660 aa18.01■□□□□ 0.47
SRPK1-204ENST00000373825 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.479e-8■■■■□ 21
SRPK1-204ENST00000373825 ATP2B1P20020 1258 aa18.01■□□□□ 0.47
SRPK1-204ENST00000373825 GJB2P29033 226 aa18.01■□□□□ 0.47
SRPK1-204ENST00000373825 GSDMDP57764 484 aa18.01■□□□□ 0.47
SRPK1-204ENST00000373825 DYDC1Q8WWB3 177 aa18.01■□□□□ 0.47
SRPK1-204ENST00000373825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.01■□□□□ 0.47
SRPK1-204ENST00000373825 ANKRD65E5RJM6 399 aa18.01■□□□□ 0.47
SRPK1-204ENST00000373825 PRKAR2BP31323 418 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms