RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 CEP350Q5VT06 3117 aa21.06■□□□□ 0.96
CDKN1A-202ENST00000373711 MSH5O43196 834 aa21.06■□□□□ 0.96
CDKN1A-202ENST00000373711 CCNL1Q9UK58 526 aaPredicted RBP21.06■□□□□ 0.96
CDKN1A-202ENST00000373711 PRIM1P49642 420 aaKnown RBP21.05■□□□□ 0.96
CDKN1A-202ENST00000373711 USP47Q96K76 1375 aa21.05■□□□□ 0.96
CDKN1A-202ENST00000373711 LTV1Q96GA3 475 aaPredicted RBP21.04■□□□□ 0.96
CDKN1A-202ENST00000373711 C5P01031 1676 aa21.04■□□□□ 0.96
CDKN1A-202ENST00000373711 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
CDKN1A-202ENST00000373711 RGPD2P0DJD1 1756 aa21.02■□□□□ 0.96
CDKN1A-202ENST00000373711 A0A1W2PP64 1363 aa21.02■□□□□ 0.96
CDKN1A-202ENST00000373711 YBX3P16989 372 aaKnown RBP eCLIP21.02■□□□□ 0.96
CDKN1A-202ENST00000373711 ZCRB1Q8TBF4 217 aaKnown RBP21.02■□□□□ 0.96
CDKN1A-202ENST00000373711 NSD2O96028 1365 aa21.01■□□□□ 0.95
CDKN1A-202ENST00000373711 KCNQ4P56696 695 aa21.01■□□□□ 0.95
CDKN1A-202ENST00000373711 FLAD1Q8NFF5 587 aa21.01■□□□□ 0.95
CDKN1A-202ENST00000373711 GPBP1L1Q9HC44 474 aaPredicted RBP21.01■□□□□ 0.95
CDKN1A-202ENST00000373711 TAF1LQ8IZX4 1826 aa21■□□□□ 0.95
CDKN1A-202ENST00000373711 PUS7Q96PZ0 661 aaKnown RBP21■□□□□ 0.95
CDKN1A-202ENST00000373711 SLC12A5Q9H2X9 1139 aa21■□□□□ 0.95
CDKN1A-202ENST00000373711 CD2APQ9Y5K6 639 aa21■□□□□ 0.95
CDKN1A-202ENST00000373711 CGNL1Q0VF96 1302 aa21■□□□□ 0.95
CDKN1A-202ENST00000373711 AMPHP49418 695 aa20.99■□□□□ 0.95
CDKN1A-202ENST00000373711 COG3Q96JB2 828 aa20.99■□□□□ 0.95
CDKN1A-202ENST00000373711 CARD11Q9BXL7 1154 aa20.99■□□□□ 0.95
CDKN1A-202ENST00000373711 COL23A1Q86Y22 540 aaPredicted RBP20.98■□□□□ 0.95
CDKN1A-202ENST00000373711 RTL1A6NKG5 1358 aa20.97■□□□□ 0.95
CDKN1A-202ENST00000373711 SMG6Q86US8 1419 aaKnown RBP20.97■□□□□ 0.95
CDKN1A-202ENST00000373711 HOXC9P31274 260 aa20.97■□□□□ 0.95
CDKN1A-202ENST00000373711 NEUROD1Q13562 356 aa20.97■□□□□ 0.95
CDKN1A-202ENST00000373711 MEGF6O75095 1541 aa20.97■□□□□ 0.95
CDKN1A-202ENST00000373711 SIN3AQ96ST3 1273 aa20.96■□□□□ 0.95
CDKN1A-202ENST00000373711 MAP3K19Q56UN5 1328 aa20.96■□□□□ 0.95
CDKN1A-202ENST00000373711 MSL1Q68DK7 614 aa20.95■□□□□ 0.94
CDKN1A-202ENST00000373711 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.94
CDKN1A-202ENST00000373711 HSPA6P17066 643 aa20.94■□□□□ 0.94
CDKN1A-202ENST00000373711 RAPGEF4Q8WZA2 1011 aa20.94■□□□□ 0.94
CDKN1A-202ENST00000373711 ADCY9O60503 1353 aa20.94■□□□□ 0.94
CDKN1A-202ENST00000373711 SLC24A1O60721 1099 aa20.92■□□□□ 0.94
CDKN1A-202ENST00000373711 C4BP0C0L5 1744 aa20.92■□□□□ 0.94
CDKN1A-202ENST00000373711 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
CDKN1A-202ENST00000373711 PCDH11XQ9BZA7 1347 aa20.91■□□□□ 0.94
CDKN1A-202ENST00000373711 PCDH11YQ9BZA8 1340 aa20.91■□□□□ 0.94
CDKN1A-202ENST00000373711 PALLDQ8WX93 1383 aa20.9■□□□□ 0.94
CDKN1A-202ENST00000373711 TATP17735 454 aaPredicted RBP20.9■□□□□ 0.94
CDKN1A-202ENST00000373711 ITGB4P16144 1822 aa20.9■□□□□ 0.94
CDKN1A-202ENST00000373711 AK7Q96M32 723 aa20.89■□□□□ 0.93
CDKN1A-202ENST00000373711 UBR3Q6ZT12 1888 aa20.89■□□□□ 0.93
CDKN1A-202ENST00000373711 ZNF526Q8TF50 670 aaPredicted RBP20.88■□□□□ 0.93
CDKN1A-202ENST00000373711 SMARCC1Q92922 1105 aaPredicted RBP20.88■□□□□ 0.93
CDKN1A-202ENST00000373711 IGSF1Q8N6C5 1336 aa20.85■□□□□ 0.93
CDKN1A-202ENST00000373711 NBPF6Q5VWK0 638 aa20.85■□□□□ 0.93
CDKN1A-202ENST00000373711 NBPF4Q96M43 638 aa20.85■□□□□ 0.93
CDKN1A-202ENST00000373711 TOGARAM1Q9Y4F4 1720 aa20.84■□□□□ 0.93
CDKN1A-202ENST00000373711 KIF20BQ96Q89 1820 aa20.84■□□□□ 0.93
CDKN1A-202ENST00000373711 MPRIPQ6WCQ1 1025 aa20.84■□□□□ 0.93
CDKN1A-202ENST00000373711 PKD1L3Q7Z443 1732 aa20.83■□□□□ 0.92
CDKN1A-202ENST00000373711 KIF24Q5T7B8 1368 aa20.83■□□□□ 0.92
CDKN1A-202ENST00000373711 CICQ96RK0 1608 aaPredicted RBP20.82■□□□□ 0.92
CDKN1A-202ENST00000373711 USHBP1Q8N6Y0 703 aa20.82■□□□□ 0.92
CDKN1A-202ENST00000373711 SSFA2P28290 1259 aa20.81■□□□□ 0.92
CDKN1A-202ENST00000373711 RRS1Q15050 365 aaKnown RBP20.81■□□□□ 0.92
CDKN1A-202ENST00000373711 INSRP06213 1382 aa20.81■□□□□ 0.92
CDKN1A-202ENST00000373711 TONSLQ96HA7 1378 aa20.81■□□□□ 0.92
CDKN1A-202ENST00000373711 FLT4P35916 1363 aa20.8■□□□□ 0.92
CDKN1A-202ENST00000373711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.79■□□□□ 0.92
CDKN1A-202ENST00000373711 PHF14O94880 888 aa20.79■□□□□ 0.92
CDKN1A-202ENST00000373711 FBLN1P23142 703 aa20.79■□□□□ 0.92
CDKN1A-202ENST00000373711 APLP1P51693 650 aa20.79■□□□□ 0.92
CDKN1A-202ENST00000373711 MAP2P11137 1827 aaKnown RBP20.78■□□□□ 0.92
CDKN1A-202ENST00000373711 KIF13BQ9NQT8 1826 aa20.78■□□□□ 0.92
CDKN1A-202ENST00000373711 PCGF6Q9BYE7 350 aa20.77■□□□□ 0.92
CDKN1A-202ENST00000373711 KIF3CO14782 793 aa20.76■□□□□ 0.91
CDKN1A-202ENST00000373711 TESK2Q96S53 571 aa20.76■□□□□ 0.91
CDKN1A-202ENST00000373711 CYP27B1O15528 508 aa20.75■□□□□ 0.91
CDKN1A-202ENST00000373711 GGNBP2Q9H3C7 697 aa20.75■□□□□ 0.91
CDKN1A-202ENST00000373711 ST20-MTHFSA0A0A6YYL1 179 aa20.74■□□□□ 0.91
CDKN1A-202ENST00000373711 FYB1O15117 783 aa20.74■□□□□ 0.91
CDKN1A-202ENST00000373711 HSP90AB2PQ58FF8 381 aa20.74■□□□□ 0.91
CDKN1A-202ENST00000373711 WWC3Q9ULE0 1092 aa20.74■□□□□ 0.91
CDKN1A-202ENST00000373711 LOC102724428A0A0B4J2F2 783 aa20.73■□□□□ 0.91
CDKN1A-202ENST00000373711 SIK1P57059 783 aa20.73■□□□□ 0.91
CDKN1A-202ENST00000373711 SPG7Q9UQ90 795 aa20.73■□□□□ 0.91
CDKN1A-202ENST00000373711 TOMM70O94826 608 aa20.72■□□□□ 0.91
CDKN1A-202ENST00000373711 PIGBQ92521 554 aa20.72■□□□□ 0.91
CDKN1A-202ENST00000373711 N4BP2Q86UW6 1770 aaPredicted RBP20.72■□□□□ 0.91
CDKN1A-202ENST00000373711 GNPATO15228 680 aa20.71■□□□□ 0.91
CDKN1A-202ENST00000373711 TMF1P82094 1093 aa20.71■□□□□ 0.91
CDKN1A-202ENST00000373711 NKX1-1Q15270 411 aaPredicted RBP20.71■□□□□ 0.91
CDKN1A-202ENST00000373711 TMOD3Q9NYL9 352 aa20.71■□□□□ 0.91
CDKN1A-202ENST00000373711 TGFB2P61812 414 aa20.7■□□□□ 0.9
CDKN1A-202ENST00000373711 AMIGO3Q86WK7 504 aa20.7■□□□□ 0.9
CDKN1A-202ENST00000373711 WDR90Q96KV7 1748 aa20.7■□□□□ 0.9
CDKN1A-202ENST00000373711 KIAA1551Q9HCM1 1747 aa20.7■□□□□ 0.9
CDKN1A-202ENST00000373711 ANKRD26Q9UPS8 1709 aa20.7■□□□□ 0.9
CDKN1A-202ENST00000373711 PXDNLA1KZ92 1463 aa20.69■□□□□ 0.9
CDKN1A-202ENST00000373711 CDCA8Q53HL2 280 aa20.69■□□□□ 0.9
CDKN1A-202ENST00000373711 LINC00116Q8NCU8 138 aa20.69■□□□□ 0.9
CDKN1A-202ENST00000373711 NCAPD2Q15021 1401 aa20.69■□□□□ 0.9
CDKN1A-202ENST00000373711 ZNF831Q5JPB2 1677 aa20.68■□□□□ 0.9
CDKN1A-202ENST00000373711 MMP10P09238 476 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms