RNA–Protein interactions for RNA: ENST00000373596.5

NEK6-202, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-202ENST00000373596 USHBP1Q8N6Y0 703 aa18.39■□□□□ 0.53
NEK6-202ENST00000373596 ZCRB1Q8TBF4 217 aaKnown RBP18.39■□□□□ 0.53
NEK6-202ENST00000373596 FYB1O15117 783 aa18.38■□□□□ 0.53
NEK6-202ENST00000373596 NBPF6Q5VWK0 638 aa18.38■□□□□ 0.53
NEK6-202ENST00000373596 NBPF4Q96M43 638 aa18.38■□□□□ 0.53
NEK6-202ENST00000373596 PNPLA7Q6ZV29 1317 aa18.38■□□□□ 0.53
NEK6-202ENST00000373596 RTL1A6NKG5 1358 aa18.38■□□□□ 0.53
NEK6-202ENST00000373596 USP47Q96K76 1375 aa18.38■□□□□ 0.53
NEK6-202ENST00000373596 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
NEK6-202ENST00000373596 TUBGCP6Q96RT7 1819 aa18.37■□□□□ 0.53
NEK6-202ENST00000373596 ZNF784Q8NCA9 323 aaPredicted RBP18.36■□□□□ 0.53
NEK6-202ENST00000373596 TMF1P82094 1093 aa18.35■□□□□ 0.53
NEK6-202ENST00000373596 KLHL34Q8N239 644 aa18.35■□□□□ 0.53
NEK6-202ENST00000373596 TFCP2L1Q9NZI6 479 aa18.35■□□□□ 0.53
NEK6-202ENST00000373596 LY75O60449 1722 aa18.35■□□□□ 0.53
NEK6-202ENST00000373596 QSER1Q2KHR3 1735 aa18.35■□□□□ 0.53
NEK6-202ENST00000373596 SLC24A1O60721 1099 aa18.34■□□□□ 0.53
NEK6-202ENST00000373596 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.52
NEK6-202ENST00000373596 SLC16A10Q8TF71 515 aa18.33■□□□□ 0.52
NEK6-202ENST00000373596 CCNL1Q9UK58 526 aaPredicted RBP18.33■□□□□ 0.52
NEK6-202ENST00000373596 SMG6Q86US8 1419 aaKnown RBP18.32■□□□□ 0.52
NEK6-202ENST00000373596 POLD1P28340 1107 aa18.31■□□□□ 0.52
NEK6-202ENST00000373596 RAPGEF4Q8WZA2 1011 aa18.31■□□□□ 0.52
NEK6-202ENST00000373596 COL24A1Q17RW2 1714 aa18.31■□□□□ 0.52
NEK6-202ENST00000373596 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
NEK6-202ENST00000373596 CHD4Q14839 1912 aa18.3■□□□□ 0.52
NEK6-202ENST00000373596 INSRP06213 1382 aa18.3■□□□□ 0.52
NEK6-202ENST00000373596 CGNL1Q0VF96 1302 aa18.29■□□□□ 0.52
NEK6-202ENST00000373596 TATP17735 454 aaPredicted RBP18.29■□□□□ 0.52
NEK6-202ENST00000373596 GPR162Q16538 588 aa18.29■□□□□ 0.52
NEK6-202ENST00000373596 NLGN2Q8NFZ4 835 aa18.29■□□□□ 0.52
NEK6-202ENST00000373596 CARD14Q9BXL6 1004 aa18.29■□□□□ 0.52
NEK6-202ENST00000373596 GOLGB1Q14789 3259 aaKnown RBP18.29■□□□□ 0.52
NEK6-202ENST00000373596 FLT4P35916 1363 aa18.29■□□□□ 0.52
NEK6-202ENST00000373596 EMILIN1Q9Y6C2 1016 aa18.28■□□□□ 0.52
NEK6-202ENST00000373596 NSD3Q9BZ95 1437 aa18.27■□□□□ 0.52
NEK6-202ENST00000373596 COL23A1Q86Y22 540 aaPredicted RBP18.27■□□□□ 0.52
NEK6-202ENST00000373596 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
NEK6-202ENST00000373596 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
NEK6-202ENST00000373596 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
NEK6-202ENST00000373596 CYP27B1O15528 508 aa18.26■□□□□ 0.51
NEK6-202ENST00000373596 MSH5O43196 834 aa18.26■□□□□ 0.51
NEK6-202ENST00000373596 MSL1Q68DK7 614 aa18.26■□□□□ 0.51
NEK6-202ENST00000373596 CDCA8Q53HL2 280 aa18.25■□□□□ 0.51
NEK6-202ENST00000373596 TOGARAM1Q9Y4F4 1720 aa18.24■□□□□ 0.51
NEK6-202ENST00000373596 TRIM26Q12899 539 aaPredicted RBP18.24■□□□□ 0.51
NEK6-202ENST00000373596 MPRIPQ6WCQ1 1025 aa18.24■□□□□ 0.51
NEK6-202ENST00000373596 KIF24Q5T7B8 1368 aa18.24■□□□□ 0.51
NEK6-202ENST00000373596 PALLDQ8WX93 1383 aa18.24■□□□□ 0.51
NEK6-202ENST00000373596 C5P01031 1676 aa18.23■□□□□ 0.51
NEK6-202ENST00000373596 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
NEK6-202ENST00000373596 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
NEK6-202ENST00000373596 YBX3P16989 372 aaKnown RBP eCLIP18.2■□□□□ 0.59e-6■■■□□ 18.6
NEK6-202ENST00000373596 AMIGO3Q86WK7 504 aa18.2■□□□□ 0.5
NEK6-202ENST00000373596 TAF1LQ8IZX4 1826 aa18.2■□□□□ 0.5
NEK6-202ENST00000373596 NCAPD2Q15021 1401 aa18.2■□□□□ 0.5
NEK6-202ENST00000373596 SMIM5Q71RC9 77 aa18.19■□□□□ 0.5
NEK6-202ENST00000373596 ITGB4P16144 1822 aa18.19■□□□□ 0.5
NEK6-202ENST00000373596 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
NEK6-202ENST00000373596 PIGBQ92521 554 aa18.18■□□□□ 0.5
NEK6-202ENST00000373596 C1QTNF8P60827 252 aa18.17■□□□□ 0.5
NEK6-202ENST00000373596 EYA1Q99502 592 aa18.17■□□□□ 0.5
NEK6-202ENST00000373596 C4BP0C0L5 1744 aa18.17■□□□□ 0.5
NEK6-202ENST00000373596 WASHC2AQ641Q2 1341 aa18.16■□□□□ 0.5
NEK6-202ENST00000373596 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
NEK6-202ENST00000373596 PHF14O94880 888 aa18.15■□□□□ 0.5
NEK6-202ENST00000373596 NKX1-1Q15270 411 aaPredicted RBP18.15■□□□□ 0.5
NEK6-202ENST00000373596 SMARCC1Q92922 1105 aaPredicted RBP18.15■□□□□ 0.5
NEK6-202ENST00000373596 AK7Q96M32 723 aa18.15■□□□□ 0.5
NEK6-202ENST00000373596 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
NEK6-202ENST00000373596 FLAD1Q8NFF5 587 aa18.14■□□□□ 0.49
NEK6-202ENST00000373596 POLKQ9UBT6 870 aa18.14■□□□□ 0.49
NEK6-202ENST00000373596 SPG7Q9UQ90 795 aa18.14■□□□□ 0.49
NEK6-202ENST00000373596 MAP2P11137 1827 aaKnown RBP18.14■□□□□ 0.49
NEK6-202ENST00000373596 TNNT2P45379 298 aaPredicted RBP18.13■□□□□ 0.49
NEK6-202ENST00000373596 LINC00116Q8NCU8 138 aa18.13■□□□□ 0.49
NEK6-202ENST00000373596 UBR3Q6ZT12 1888 aa18.13■□□□□ 0.49
NEK6-202ENST00000373596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.12■□□□□ 0.49
NEK6-202ENST00000373596 LOC102724428A0A0B4J2F2 783 aa18.12■□□□□ 0.49
NEK6-202ENST00000373596 GRIN3BO60391 1043 aa18.12■□□□□ 0.49
NEK6-202ENST00000373596 SIK1P57059 783 aa18.12■□□□□ 0.49
NEK6-202ENST00000373596 GIGYF1O75420 1035 aaPredicted RBP18.11■□□□□ 0.49
NEK6-202ENST00000373596 EIF4A2Q14240 407 aaKnown RBP18.11■□□□□ 0.49
NEK6-202ENST00000373596 TMOD3Q9NYL9 352 aa18.11■□□□□ 0.49
NEK6-202ENST00000373596 ASAP1Q9ULH1 1129 aa18.11■□□□□ 0.49
NEK6-202ENST00000373596 CD2APQ9Y5K6 639 aa18.11■□□□□ 0.49
NEK6-202ENST00000373596 PHKG2P15735 406 aa18.1■□□□□ 0.49
NEK6-202ENST00000373596 ITPK1Q13572 414 aa18.1■□□□□ 0.49
NEK6-202ENST00000373596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.1■□□□□ 0.494e-6■■□□□ 11.9
NEK6-202ENST00000373596 WWC3Q9ULE0 1092 aa18.1■□□□□ 0.49
NEK6-202ENST00000373596 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
NEK6-202ENST00000373596 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.48
NEK6-202ENST00000373596 IFNL2Q8IZJ0 200 aa18.08■□□□□ 0.48
NEK6-202ENST00000373596 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
NEK6-202ENST00000373596 GNPATO15228 680 aa18.07■□□□□ 0.48
NEK6-202ENST00000373596 SSFA2P28290 1259 aa18.07■□□□□ 0.48
NEK6-202ENST00000373596 ATP10DQ9P241 1426 aa18.06■□□□□ 0.48
NEK6-202ENST00000373596 ATP6V1AP38606 617 aa18.06■□□□□ 0.48
NEK6-202ENST00000373596 ATG3Q9NT62 314 aa18.06■□□□□ 0.48
NEK6-202ENST00000373596 IGSF1Q8N6C5 1336 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 254.5 ms