RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 PLXNC1O60486 1568 aa21.5■■□□□ 1.03
TRAF3IP1-201ENST00000373327 BTBD11A6QL63 1104 aa21.49■■□□□ 1.03
TRAF3IP1-201ENST00000373327 MAP3K19Q56UN5 1328 aa21.49■■□□□ 1.03
TRAF3IP1-201ENST00000373327 MRE11P49959 708 aa21.49■■□□□ 1.03
TRAF3IP1-201ENST00000373327 CLASRPQ8N2M8 674 aaKnown RBP21.49■■□□□ 1.03
TRAF3IP1-201ENST00000373327 NASPP49321 788 aaPredicted RBP21.49■■□□□ 1.03
TRAF3IP1-201ENST00000373327 DRC7Q8IY82 874 aa21.49■■□□□ 1.03
TRAF3IP1-201ENST00000373327 EYA1Q99502 592 aa21.49■■□□□ 1.03
TRAF3IP1-201ENST00000373327 TNRQ92752 1358 aa21.49■■□□□ 1.03
TRAF3IP1-201ENST00000373327 ZMYM3Q14202 1370 aa21.48■■□□□ 1.03
TRAF3IP1-201ENST00000373327 LRRC59Q96AG4 307 aaKnown RBP21.48■■□□□ 1.03
TRAF3IP1-201ENST00000373327 GRPEL1Q9HAV7 217 aa21.48■■□□□ 1.03
TRAF3IP1-201ENST00000373327 TAF7LQ5H9L4 462 aa21.47■■□□□ 1.03
TRAF3IP1-201ENST00000373327 NEUROD6Q96NK8 337 aa21.47■■□□□ 1.03
TRAF3IP1-201ENST00000373327 GDPD2Q9HCC8 539 aa21.47■■□□□ 1.03
TRAF3IP1-201ENST00000373327 SBNO2Q9Y2G9 1366 aa21.47■■□□□ 1.03
TRAF3IP1-201ENST00000373327 MX1P20591 662 aa21.47■■□□□ 1.03
TRAF3IP1-201ENST00000373327 PTMSP20962 102 aa21.47■■□□□ 1.03
TRAF3IP1-201ENST00000373327 PIP4K2AP48426 406 aaPredicted RBP21.46■■□□□ 1.03
TRAF3IP1-201ENST00000373327 PUS7Q96PZ0 661 aaKnown RBP21.46■■□□□ 1.03
TRAF3IP1-201ENST00000373327 ZRSR1Q15695 479 aaKnown RBP21.46■■□□□ 1.03
TRAF3IP1-201ENST00000373327 MADDQ8WXG6 1647 aa21.46■■□□□ 1.03
TRAF3IP1-201ENST00000373327 TTC22Q5TAA0 569 aa21.46■■□□□ 1.03
TRAF3IP1-201ENST00000373327 PHF8Q9UPP1 1060 aa21.46■■□□□ 1.03
TRAF3IP1-201ENST00000373327 PLEKHO1Q53GL0 409 aaPredicted RBP21.45■■□□□ 1.02
TRAF3IP1-201ENST00000373327 LTKP29376 864 aa21.45■■□□□ 1.02
TRAF3IP1-201ENST00000373327 FIBPO43427 364 aa21.45■■□□□ 1.02
TRAF3IP1-201ENST00000373327 METP08581 1390 aa21.45■■□□□ 1.02
TRAF3IP1-201ENST00000373327 KIF1BO60333 1816 aa21.44■■□□□ 1.02
TRAF3IP1-201ENST00000373327 SYTL4Q96C24 671 aaPredicted RBP21.44■■□□□ 1.02
TRAF3IP1-201ENST00000373327 PI4KAP2A4QPH2 592 aa21.44■■□□□ 1.02
TRAF3IP1-201ENST00000373327 PI4KAP1Q8N8J0 262 aa21.44■■□□□ 1.02
TRAF3IP1-201ENST00000373327 SMC3Q9UQE7 1217 aa21.44■■□□□ 1.02
TRAF3IP1-201ENST00000373327 KCNA6P17658 529 aa21.43■■□□□ 1.02
TRAF3IP1-201ENST00000373327 PLEKHM2Q8IWE5 1019 aa21.43■■□□□ 1.02
TRAF3IP1-201ENST00000373327 CCDC85AQ96PX6 553 aaPredicted RBP21.43■■□□□ 1.02
TRAF3IP1-201ENST00000373327 FSD1Q9BTV5 496 aa21.43■■□□□ 1.02
TRAF3IP1-201ENST00000373327 DNAJC2Q99543 621 aaKnown RBP21.43■■□□□ 1.02
TRAF3IP1-201ENST00000373327 SPG7Q9UQ90 795 aa21.43■■□□□ 1.02
TRAF3IP1-201ENST00000373327 CEP85Q6P2H3 762 aa21.43■■□□□ 1.02
TRAF3IP1-201ENST00000373327 PHAXQ9H814 394 aaKnown RBP21.43■■□□□ 1.02
TRAF3IP1-201ENST00000373327 KDM4AO75164 1064 aa21.42■■□□□ 1.02
TRAF3IP1-201ENST00000373327 ZKSCAN1P17029 563 aaPredicted RBP21.42■■□□□ 1.02
TRAF3IP1-201ENST00000373327 ANKRD44Q8N8A2 993 aa21.42■■□□□ 1.02
TRAF3IP1-201ENST00000373327 SYAP1Q96A49 352 aaPredicted RBP21.42■■□□□ 1.02
TRAF3IP1-201ENST00000373327 DDX58O95786 925 aaKnown RBP21.42■■□□□ 1.02
TRAF3IP1-201ENST00000373327 STK3Q13188 491 aa21.42■■□□□ 1.02
TRAF3IP1-201ENST00000373327 ANKLE2Q86XL3 938 aa21.42■■□□□ 1.02
TRAF3IP1-201ENST00000373327 ARHGAP45Q92619 1136 aa21.42■■□□□ 1.02
TRAF3IP1-201ENST00000373327 BCL11BQ9C0K0 894 aaPredicted RBP21.42■■□□□ 1.02
TRAF3IP1-201ENST00000373327 FBXW7Q969H0 707 aa21.41■■□□□ 1.02
TRAF3IP1-201ENST00000373327 CNTROBQ8N137 903 aa21.41■■□□□ 1.02
TRAF3IP1-201ENST00000373327 MYOM2P54296 1465 aa21.41■■□□□ 1.02
TRAF3IP1-201ENST00000373327 SPHKAPQ2M3C7 1700 aa21.41■■□□□ 1.02
TRAF3IP1-201ENST00000373327 AACSQ86V21 672 aa21.41■■□□□ 1.02
TRAF3IP1-201ENST00000373327 CHMP4AQ9BY43 222 aa21.41■■□□□ 1.02
TRAF3IP1-201ENST00000373327 ATF3P18847 181 aa21.41■■□□□ 1.02
TRAF3IP1-201ENST00000373327 PPP1R42Q7Z4L9 355 aa21.41■■□□□ 1.02
TRAF3IP1-201ENST00000373327 TET3O43151 1660 aa21.4■■□□□ 1.02
TRAF3IP1-201ENST00000373327 MAP3K4Q9Y6R4 1608 aa21.4■■□□□ 1.02
TRAF3IP1-201ENST00000373327 ZGPATQ8N5A5 531 aaKnown RBP21.4■■□□□ 1.02
TRAF3IP1-201ENST00000373327 CCDC8Q9H0W5 538 aaPredicted RBP21.4■■□□□ 1.02
TRAF3IP1-201ENST00000373327 RBM27Q9P2N5 1060 aaKnown RBP21.4■■□□□ 1.02
TRAF3IP1-201ENST00000373327 RUFY2Q8WXA3 655 aa21.39■■□□□ 1.02
TRAF3IP1-201ENST00000373327 MSH6P52701 1360 aa21.39■■□□□ 1.01
TRAF3IP1-201ENST00000373327 XRCC6P12956 609 aaKnown RBP eCLIP21.39■■□□□ 1.01
TRAF3IP1-201ENST00000373327 CHPF2Q9P2E5 772 aa21.39■■□□□ 1.01
TRAF3IP1-201ENST00000373327 STRN4Q9NRL3 753 aa21.39■■□□□ 1.01
TRAF3IP1-201ENST00000373327 POLR1AO95602 1720 aaPredicted RBP21.39■■□□□ 1.01
TRAF3IP1-201ENST00000373327 KAT6BQ8WYB5 2073 aa21.38■■□□□ 1.01
TRAF3IP1-201ENST00000373327 EFCAB6Q5THR3 1501 aa21.38■■□□□ 1.01
TRAF3IP1-201ENST00000373327 GLIPR1L2Q4G1C9 344 aa21.38■■□□□ 1.01
TRAF3IP1-201ENST00000373327 DCTPP1Q9H773 170 aa21.38■■□□□ 1.01
TRAF3IP1-201ENST00000373327 EVA1CP58658 441 aa21.38■■□□□ 1.01
TRAF3IP1-201ENST00000373327 SLC39A6Q13433 755 aa21.38■■□□□ 1.01
TRAF3IP1-201ENST00000373327 CHAMP1Q96JM3 812 aa21.38■■□□□ 1.01
TRAF3IP1-201ENST00000373327 PDE1AP54750 535 aa21.38■■□□□ 1.01
TRAF3IP1-201ENST00000373327 USP19O94966 1318 aa21.38■■□□□ 1.01
TRAF3IP1-201ENST00000373327 HDAC5Q9UQL6 1122 aa21.37■■□□□ 1.01
TRAF3IP1-201ENST00000373327 ABCA6Q8N139 1617 aa21.37■■□□□ 1.01
TRAF3IP1-201ENST00000373327 FAM177BA6PVY3 158 aa21.37■■□□□ 1.01
TRAF3IP1-201ENST00000373327 PPFIA3O75145 1194 aa21.37■■□□□ 1.01
TRAF3IP1-201ENST00000373327 CHRNA2Q15822 529 aa21.36■■□□□ 1.01
TRAF3IP1-201ENST00000373327 SYCE3A1L190 88 aa21.36■■□□□ 1.01
TRAF3IP1-201ENST00000373327 FERMT3Q86UX7 667 aa21.36■■□□□ 1.01
TRAF3IP1-201ENST00000373327 BOLA2Q9H3K6 86 aa21.36■■□□□ 1.01
TRAF3IP1-201ENST00000373327 RNF17Q9BXT8 1623 aaKnown RBP21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 TSPOAP1O95153 1857 aa21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 H3BQV1 296 aa21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 NPHP1O15259 732 aa21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 PTCD1O75127 700 aaKnown RBP21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 IFFO2Q5TF58 517 aa21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 PTPRCP08575 1304 aa21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 PRR36Q9H6K5 1346 aa21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 CEBPZQ03701 1054 aaKnown RBP21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 TOMM22Q9NS69 142 aa21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 PA2G4Q9UQ80 394 aaKnown RBP21.35■■□□□ 1.01
TRAF3IP1-201ENST00000373327 CD2BP2O95400 341 aaKnown RBP21.34■■□□□ 1.01
TRAF3IP1-201ENST00000373327 BAG4O95429 457 aaKnown RBP21.34■■□□□ 1.01
TRAF3IP1-201ENST00000373327 HSP90AB4PQ58FF6 505 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms