RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 ARFGEF1Q9Y6D6 1849 aa11.74□□□□□ -0.53
YIPF3-201ENST00000372417 KCNQ4P56696 695 aa11.74□□□□□ -0.53
YIPF3-201ENST00000372417 COL23A1Q86Y22 540 aaPredicted RBP11.74□□□□□ -0.53
YIPF3-201ENST00000372417 UBR3Q6ZT12 1888 aa11.74□□□□□ -0.53
YIPF3-201ENST00000372417 SBF1O95248 1867 aa11.72□□□□□ -0.53
YIPF3-201ENST00000372417 FAM208AQ9UK61 1670 aaKnown RBP11.71□□□□□ -0.53
YIPF3-201ENST00000372417 NFAT5O94916 1531 aa11.71□□□□□ -0.53
YIPF3-201ENST00000372417 ARHGEF25Q86VW2 580 aa11.71□□□□□ -0.53
YIPF3-201ENST00000372417 TOGARAM1Q9Y4F4 1720 aa11.71□□□□□ -0.54
YIPF3-201ENST00000372417 IL2RBP14784 551 aa11.7□□□□□ -0.54
YIPF3-201ENST00000372417 C10orf71Q711Q0 1435 aa11.69□□□□□ -0.54
YIPF3-201ENST00000372417 PLEKHG2Q9H7P9 1386 aa11.69□□□□□ -0.54
YIPF3-201ENST00000372417 FAM161AQ3B820 660 aa11.69□□□□□ -0.54
YIPF3-201ENST00000372417 KCNH5Q8NCM2 988 aa11.69□□□□□ -0.54
YIPF3-201ENST00000372417 MPHOSPH9Q99550 1183 aa11.69□□□□□ -0.54
YIPF3-201ENST00000372417 CCNL1Q9UK58 526 aaPredicted RBP11.69□□□□□ -0.54
YIPF3-201ENST00000372417 C4BP0C0L5 1744 aa11.69□□□□□ -0.54
YIPF3-201ENST00000372417 SYTL4Q96C24 671 aaPredicted RBP11.68□□□□□ -0.54
YIPF3-201ENST00000372417 KCPQ6ZWJ8 1503 aa11.67□□□□□ -0.54
YIPF3-201ENST00000372417 SOX12O15370 315 aa11.67□□□□□ -0.54
YIPF3-201ENST00000372417 FLAD1Q8NFF5 587 aa11.67□□□□□ -0.54
YIPF3-201ENST00000372417 CCDC88AQ3V6T2 1871 aa11.67□□□□□ -0.54
YIPF3-201ENST00000372417 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
YIPF3-201ENST00000372417 SMC1BQ8NDV3 1235 aa11.66□□□□□ -0.54
YIPF3-201ENST00000372417 NLRP2Q9NX02 1062 aa11.66□□□□□ -0.54
YIPF3-201ENST00000372417 RGPD2P0DJD1 1756 aa11.66□□□□□ -0.54
YIPF3-201ENST00000372417 NSD2O96028 1365 aa11.66□□□□□ -0.54
YIPF3-201ENST00000372417 KDM2BQ8NHM5 1336 aa11.65□□□□□ -0.54
YIPF3-201ENST00000372417 PXDNLA1KZ92 1463 aa11.65□□□□□ -0.54
YIPF3-201ENST00000372417 SRPK2P78362 688 aaKnown RBP11.65□□□□□ -0.54
YIPF3-201ENST00000372417 ITGB4P16144 1822 aa11.65□□□□□ -0.55
YIPF3-201ENST00000372417 ERBB3P21860 1342 aa11.64□□□□□ -0.55
YIPF3-201ENST00000372417 PRIM1P49642 420 aaKnown RBP11.64□□□□□ -0.55
YIPF3-201ENST00000372417 DDX54Q8TDD1 881 aaKnown RBP11.64□□□□□ -0.55
YIPF3-201ENST00000372417 ARHGAP27Q6ZUM4 889 aa11.63□□□□□ -0.55
YIPF3-201ENST00000372417 KDM2AQ9Y2K7 1162 aa11.63□□□□□ -0.55
YIPF3-201ENST00000372417 USP47Q96K76 1375 aa11.63□□□□□ -0.55
YIPF3-201ENST00000372417 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
YIPF3-201ENST00000372417 VIRMAQ69YN4 1812 aaKnown RBP11.63□□□□□ -0.55
YIPF3-201ENST00000372417 RRAGCQ9HB90 399 aa11.62□□□□□ -0.55
YIPF3-201ENST00000372417 BCS1LQ9Y276 419 aa11.62□□□□□ -0.55
YIPF3-201ENST00000372417 TNRC18O15417 2968 aaPredicted RBP11.62□□□□□ -0.55
YIPF3-201ENST00000372417 HMGB2P26583 209 aaKnown RBP11.61□□□□□ -0.55
YIPF3-201ENST00000372417 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
YIPF3-201ENST00000372417 PPARGC1BQ86YN6 1023 aaKnown RBP11.61□□□□□ -0.55
YIPF3-201ENST00000372417 CABP2Q9NPB3 220 aa11.61□□□□□ -0.55
YIPF3-201ENST00000372417 PRDM10Q9NQV6 1147 aa11.61□□□□□ -0.55
YIPF3-201ENST00000372417 PDE4DIPQ5VU43 2346 aa11.61□□□□□ -0.55
YIPF3-201ENST00000372417 NSD3Q9BZ95 1437 aa11.6□□□□□ -0.55
YIPF3-201ENST00000372417 TIAM2Q8IVF5 1701 aa11.6□□□□□ -0.55
YIPF3-201ENST00000372417 DCAF11Q8TEB1 546 aa11.6□□□□□ -0.55
YIPF3-201ENST00000372417 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
YIPF3-201ENST00000372417 FOXN1O15353 648 aa11.59□□□□□ -0.55
YIPF3-201ENST00000372417 MLLT1Q03111 559 aaPredicted RBP11.59□□□□□ -0.55
YIPF3-201ENST00000372417 TTC21BQ7Z4L5 1316 aa11.59□□□□□ -0.55
YIPF3-201ENST00000372417 ANKRD24Q8TF21 1146 aa11.58□□□□□ -0.56
YIPF3-201ENST00000372417 AK7Q96M32 723 aa11.58□□□□□ -0.56
YIPF3-201ENST00000372417 MAP2P11137 1827 aaKnown RBP11.58□□□□□ -0.56
YIPF3-201ENST00000372417 TTC21AQ8NDW8 1320 aa11.58□□□□□ -0.56
YIPF3-201ENST00000372417 C4AP0C0L4 1744 aa11.57□□□□□ -0.56
YIPF3-201ENST00000372417 FCHSD2O94868 740 aa11.57□□□□□ -0.56
YIPF3-201ENST00000372417 PHF14O94880 888 aa11.57□□□□□ -0.56
YIPF3-201ENST00000372417 TGFB2P61812 414 aa11.57□□□□□ -0.56
YIPF3-201ENST00000372417 ABHD8Q96I13 439 aa11.56□□□□□ -0.56
YIPF3-201ENST00000372417 STAC3Q96MF2 364 aa11.56□□□□□ -0.56
YIPF3-201ENST00000372417 RNF181Q9P0P0 153 aa11.56□□□□□ -0.56
YIPF3-201ENST00000372417 A0A0G2JLW4 131 aa11.55□□□□□ -0.56
YIPF3-201ENST00000372417 CTCFP49711 727 aaPredicted RBP11.55□□□□□ -0.56
YIPF3-201ENST00000372417 AIDAQ96BJ3 306 aa11.55□□□□□ -0.56
YIPF3-201ENST00000372417 PALLDQ8WX93 1383 aa11.54□□□□□ -0.56
YIPF3-201ENST00000372417 DICER1Q9UPY3 1922 aaKnown RBP11.54□□□□□ -0.56
YIPF3-201ENST00000372417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.54□□□□□ -0.56
YIPF3-201ENST00000372417 AMIGO3Q86WK7 504 aa11.54□□□□□ -0.56
YIPF3-201ENST00000372417 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
YIPF3-201ENST00000372417 MKRN1Q9UHC7 482 aaKnown RBP11.54□□□□□ -0.56
YIPF3-201ENST00000372417 CENPJQ9HC77 1338 aaPredicted RBP11.54□□□□□ -0.56
YIPF3-201ENST00000372417 SSFA2P28290 1259 aa11.53□□□□□ -0.56
YIPF3-201ENST00000372417 SMIM5Q71RC9 77 aa11.53□□□□□ -0.56
YIPF3-201ENST00000372417 MMP10P09238 476 aa11.52□□□□□ -0.57
YIPF3-201ENST00000372417 RGS19P49795 217 aa11.52□□□□□ -0.57
YIPF3-201ENST00000372417 MEGF6O75095 1541 aa11.51□□□□□ -0.57
YIPF3-201ENST00000372417 VEGFAP15692 232 aaPredicted RBP11.51□□□□□ -0.57
YIPF3-201ENST00000372417 DPEP1P16444 411 aa11.51□□□□□ -0.57
YIPF3-201ENST00000372417 ZCRB1Q8TBF4 217 aaKnown RBP11.51□□□□□ -0.57
YIPF3-201ENST00000372417 CREBZFQ9NS37 354 aa11.51□□□□□ -0.57
YIPF3-201ENST00000372417 CCDC85CA6NKD9 419 aa11.5□□□□□ -0.57
YIPF3-201ENST00000372417 LBX1P52954 281 aa11.5□□□□□ -0.57
YIPF3-201ENST00000372417 ZC3H4Q9UPT8 1303 aaKnown RBP11.5□□□□□ -0.57
YIPF3-201ENST00000372417 USP31Q70CQ4 1352 aa11.5□□□□□ -0.57
YIPF3-201ENST00000372417 KTN1Q86UP2 1357 aaKnown RBP11.5□□□□□ -0.57
YIPF3-201ENST00000372417 DLEC1Q9Y238 1755 aa11.49□□□□□ -0.57
YIPF3-201ENST00000372417 DCAF5Q96JK2 942 aa11.49□□□□□ -0.57
YIPF3-201ENST00000372417 CCDC87Q9NVE4 849 aa11.49□□□□□ -0.57
YIPF3-201ENST00000372417 CNTNAP1P78357 1384 aa11.49□□□□□ -0.57
YIPF3-201ENST00000372417 LTV1Q96GA3 475 aaPredicted RBP11.48□□□□□ -0.57
YIPF3-201ENST00000372417 EVC2Q86UK5 1308 aa11.47□□□□□ -0.57
YIPF3-201ENST00000372417 DALRD3Q5D0E6 543 aaKnown RBP11.47□□□□□ -0.57
YIPF3-201ENST00000372417 SMARCC1Q92922 1105 aaPredicted RBP11.47□□□□□ -0.57
YIPF3-201ENST00000372417 PIM2Q9P1W9 311 aa11.47□□□□□ -0.57
YIPF3-201ENST00000372417 COL5A3P25940 1745 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms