RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 AEBP1Q8IUX7 1158 aa22.63■■□□□ 1.21
CD40-201ENST00000372276 ELL2O00472 640 aaPredicted RBP22.62■■□□□ 1.21
CD40-201ENST00000372276 AMPHP49418 695 aa22.62■■□□□ 1.21
CD40-201ENST00000372276 RPAP2Q8IXW5 612 aaPredicted RBP22.62■■□□□ 1.21
CD40-201ENST00000372276 BABAM1Q9NWV8 329 aa22.62■■□□□ 1.21
CD40-201ENST00000372276 IGSF1Q8N6C5 1336 aa22.61■■□□□ 1.21
CD40-201ENST00000372276 CRB1P82279 1406 aa22.61■■□□□ 1.21
CD40-201ENST00000372276 ANKRD45Q5TZF3 282 aa22.6■■□□□ 1.21
CD40-201ENST00000372276 NUTM2FA1L443 756 aa22.59■■□□□ 1.21
CD40-201ENST00000372276 DCTN1Q14203 1278 aa22.59■■□□□ 1.21
CD40-201ENST00000372276 LNPKQ9C0E8 428 aa22.59■■□□□ 1.21
CD40-201ENST00000372276 RBM25P49756 843 aaKnown RBP22.58■■□□□ 1.21
CD40-201ENST00000372276 ANKLE2Q86XL3 938 aa22.58■■□□□ 1.21
CD40-201ENST00000372276 RTL1A6NKG5 1358 aa22.58■■□□□ 1.2
CD40-201ENST00000372276 PIK3C2AO00443 1686 aa22.58■■□□□ 1.2
CD40-201ENST00000372276 GSE1Q14687 1217 aa22.57■■□□□ 1.2
CD40-201ENST00000372276 DCTPP1Q9H773 170 aa22.57■■□□□ 1.2
CD40-201ENST00000372276 RGPD8O14715 1765 aaPredicted RBP22.57■■□□□ 1.2
CD40-201ENST00000372276 MFAP1P55081 439 aaKnown RBP22.57■■□□□ 1.2
CD40-201ENST00000372276 TBC1D2Q9BYX2 928 aa22.57■■□□□ 1.2
CD40-201ENST00000372276 NLRP6P59044 892 aa22.56■■□□□ 1.2
CD40-201ENST00000372276 CHMP4AQ9BY43 222 aa22.56■■□□□ 1.2
CD40-201ENST00000372276 MCM10Q7L590 875 aa22.55■■□□□ 1.2
CD40-201ENST00000372276 ANKRD44Q8N8A2 993 aa22.55■■□□□ 1.2
CD40-201ENST00000372276 CCT4P50991 539 aaKnown RBP22.53■■□□□ 1.2
CD40-201ENST00000372276 MTHFSDQ2M296 383 aaKnown RBP22.53■■□□□ 1.2
CD40-201ENST00000372276 SNX21Q969T3 373 aa22.53■■□□□ 1.2
CD40-201ENST00000372276 EYA1Q99502 592 aa22.53■■□□□ 1.2
CD40-201ENST00000372276 BCL11AQ9H165 835 aa22.53■■□□□ 1.2
CD40-201ENST00000372276 SIRT2Q8IXJ6 389 aa22.53■■□□□ 1.2
CD40-201ENST00000372276 ANTXR1Q9H6X2 564 aa22.53■■□□□ 1.2
CD40-201ENST00000372276 TSPYL4Q9UJ04 414 aa22.53■■□□□ 1.2
CD40-201ENST00000372276 CACNA1FO60840 1977 aa22.53■■□□□ 1.2
CD40-201ENST00000372276 HMMRO75330 724 aa22.52■■□□□ 1.2
CD40-201ENST00000372276 KCNA6P17658 529 aa22.52■■□□□ 1.2
CD40-201ENST00000372276 HSCBQ8IWL3 235 aa22.52■■□□□ 1.2
CD40-201ENST00000372276 RGS12O14924 1447 aa22.51■■□□□ 1.19
CD40-201ENST00000372276 CHD2O14647 1828 aaKnown RBP22.51■■□□□ 1.19
CD40-201ENST00000372276 GNAT3A8MTJ3 354 aa22.5■■□□□ 1.19
CD40-201ENST00000372276 HOXC9P31274 260 aa22.5■■□□□ 1.19
CD40-201ENST00000372276 STK31Q9BXU1 1019 aa22.49■■□□□ 1.19
CD40-201ENST00000372276 C1orf115Q9H7X2 142 aa22.49■■□□□ 1.19
CD40-201ENST00000372276 LRRC37A3O60309 1634 aa22.49■■□□□ 1.19
CD40-201ENST00000372276 FRAT2O75474 233 aaPredicted RBP22.49■■□□□ 1.19
CD40-201ENST00000372276 CDC45O75419 566 aa22.48■■□□□ 1.19
CD40-201ENST00000372276 SLC4A2P04920 1241 aa22.48■■□□□ 1.19
CD40-201ENST00000372276 ABTB2Q8N961 1025 aa22.48■■□□□ 1.19
CD40-201ENST00000372276 CHMP5Q9NZZ3 219 aa22.48■■□□□ 1.19
CD40-201ENST00000372276 NPHP4O75161 1426 aaPredicted RBP22.48■■□□□ 1.19
CD40-201ENST00000372276 SOX12O15370 315 aa22.47■■□□□ 1.19
CD40-201ENST00000372276 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
CD40-201ENST00000372276 PHF8Q9UPP1 1060 aa22.47■■□□□ 1.19
CD40-201ENST00000372276 KCNH5Q8NCM2 988 aa22.46■■□□□ 1.19
CD40-201ENST00000372276 MARF1Q9Y4F3 1742 aaKnown RBP22.46■■□□□ 1.19
CD40-201ENST00000372276 MAP3K5Q99683 1374 aa22.45■■□□□ 1.18
CD40-201ENST00000372276 ATP10DQ9P241 1426 aa22.45■■□□□ 1.18
CD40-201ENST00000372276 CEP85Q6P2H3 762 aa22.45■■□□□ 1.18
CD40-201ENST00000372276 SLKQ9H2G2 1235 aaPredicted RBP22.44■■□□□ 1.18
CD40-201ENST00000372276 CASC1Q6TDU7 716 aa22.43■■□□□ 1.18
CD40-201ENST00000372276 PLEKHM2Q8IWE5 1019 aa22.43■■□□□ 1.18
CD40-201ENST00000372276 TAF7Q15545 349 aaPredicted RBP22.42■■□□□ 1.18
CD40-201ENST00000372276 IP6K1Q92551 441 aa22.42■■□□□ 1.18
CD40-201ENST00000372276 CIZ1Q9ULV3 898 aaPredicted RBP22.42■■□□□ 1.18
CD40-201ENST00000372276 GNAI3P08754 354 aa22.42■■□□□ 1.18
CD40-201ENST00000372276 TBC1D9Q6ZT07 1266 aa22.42■■□□□ 1.18
CD40-201ENST00000372276 MSH6P52701 1360 aa22.42■■□□□ 1.18
CD40-201ENST00000372276 NWD1Q149M9 1564 aa22.41■■□□□ 1.18
CD40-201ENST00000372276 KRT24Q2M2I5 525 aa22.41■■□□□ 1.18
CD40-201ENST00000372276 TTC22Q5TAA0 569 aa22.41■■□□□ 1.18
CD40-201ENST00000372276 ADGRL3Q9HAR2 1447 aa22.41■■□□□ 1.18
CD40-201ENST00000372276 FOXO3O43524 673 aa22.4■■□□□ 1.18
CD40-201ENST00000372276 PHRF1Q9P1Y6 1649 aaKnown RBP22.4■■□□□ 1.18
CD40-201ENST00000372276 PXDNLA1KZ92 1463 aa22.4■■□□□ 1.18
CD40-201ENST00000372276 NCOA3Q9Y6Q9 1424 aa22.39■■□□□ 1.17
CD40-201ENST00000372276 GNAI2P04899 355 aa22.39■■□□□ 1.17
CD40-201ENST00000372276 HOXB7P09629 217 aa22.38■■□□□ 1.17
CD40-201ENST00000372276 PTMSP20962 102 aa22.37■■□□□ 1.17
CD40-201ENST00000372276 MEIS3Q99687 375 aa22.36■■□□□ 1.17
CD40-201ENST00000372276 OSBPL3Q9H4L5 887 aa22.36■■□□□ 1.17
CD40-201ENST00000372276 N4BP2Q86UW6 1770 aaPredicted RBP22.36■■□□□ 1.17
CD40-201ENST00000372276 PSME1Q06323 249 aa22.35■■□□□ 1.17
CD40-201ENST00000372276 LTN1O94822 1766 aa22.35■■□□□ 1.17
CD40-201ENST00000372276 FLIIQ13045 1269 aa22.35■■□□□ 1.17
CD40-201ENST00000372276 MIS18AQ9NYP9 233 aa22.35■■□□□ 1.17
CD40-201ENST00000372276 NFAT5O94916 1531 aa22.34■■□□□ 1.17
CD40-201ENST00000372276 FAM208AQ9UK61 1670 aaKnown RBP22.34■■□□□ 1.17
CD40-201ENST00000372276 HSP90AB1P08238 724 aaKnown RBP22.33■■□□□ 1.17
CD40-201ENST00000372276 RABEP1Q15276 862 aa22.33■■□□□ 1.17
CD40-201ENST00000372276 IL17REQ8NFR9 667 aa22.33■■□□□ 1.17
CD40-201ENST00000372276 CEMIPQ8WUJ3 1361 aa22.33■■□□□ 1.16
CD40-201ENST00000372276 GSPT1P15170 499 aaKnown RBP22.32■■□□□ 1.16
CD40-201ENST00000372276 MCM4P33991 863 aa22.32■■□□□ 1.16
CD40-201ENST00000372276 AMOTQ4VCS5 1084 aa22.32■■□□□ 1.16
CD40-201ENST00000372276 SLC4A10Q6U841 1118 aa22.32■■□□□ 1.16
CD40-201ENST00000372276 C14orf37Q86TY3 774 aa22.32■■□□□ 1.16
CD40-201ENST00000372276 IL27Q8NEV9 243 aa22.32■■□□□ 1.16
CD40-201ENST00000372276 ZNF335Q9H4Z2 1342 aaPredicted RBP22.32■■□□□ 1.16
CD40-201ENST00000372276 DDX11L8A8MPP1 907 aa22.31■■□□□ 1.16
CD40-201ENST00000372276 FKBP5Q13451 457 aaPredicted RBP22.31■■□□□ 1.16
CD40-201ENST00000372276 REC8O95072 547 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms