RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
PREX1-201ENST00000371941 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
PREX1-201ENST00000371941 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
PREX1-201ENST00000371941 TATP17735 454 aaPredicted RBP16.09■□□□□ 0.17
PREX1-201ENST00000371941 NAP1L1P55209 391 aaKnown RBP16.09■□□□□ 0.17
PREX1-201ENST00000371941 KINO60870 393 aaKnown RBP16.08■□□□□ 0.17
PREX1-201ENST00000371941 PIP4K2AP48426 406 aaPredicted RBP16.08■□□□□ 0.17
PREX1-201ENST00000371941 UQCRHLA0A096LP55 91 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 UQCRHP07919 91 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 TPM1P09493 284 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 NOL10Q9BSC4 688 aaKnown RBP16.08■□□□□ 0.16
PREX1-201ENST00000371941 ATAD2Q6PL18 1390 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 NCKAP5LQ9HCH0 1330 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 MX1P20591 662 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 RAPGEF6Q8TEU7 1601 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 KIF6Q6ZMV9 814 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 NUP133Q8WUM0 1156 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 PLEKHH1Q9ULM0 1364 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 RAB11FIP4Q86YS3 637 aa16.08■□□□□ 0.16
PREX1-201ENST00000371941 SAFBQ15424 915 aaKnown RBP eCLIP16.07■□□□□ 0.16
PREX1-201ENST00000371941 C8orf34Q49A92 452 aa16.07■□□□□ 0.16
PREX1-201ENST00000371941 MYD88Q99836 296 aa16.07■□□□□ 0.16
PREX1-201ENST00000371941 MBD3O95983 291 aa16.07■□□□□ 0.16
PREX1-201ENST00000371941 STK38Q15208 465 aa16.07■□□□□ 0.16
PREX1-201ENST00000371941 SCAF11Q99590 1463 aaKnown RBP16.07■□□□□ 0.16
PREX1-201ENST00000371941 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
PREX1-201ENST00000371941 PANK2Q9BZ23 570 aa16.06■□□□□ 0.16
PREX1-201ENST00000371941 CD109Q6YHK3 1445 aa16.06■□□□□ 0.16
PREX1-201ENST00000371941 AEBP1Q8IUX7 1158 aa16.06■□□□□ 0.16
PREX1-201ENST00000371941 ESPNB1AK53 854 aa16.06■□□□□ 0.16
PREX1-201ENST00000371941 CWC22Q9HCG8 908 aaKnown RBP16.06■□□□□ 0.16
PREX1-201ENST00000371941 MNS1Q8NEH6 495 aa16.06■□□□□ 0.16
PREX1-201ENST00000371941 SYCP2Q9BX26 1530 aa16.05■□□□□ 0.16
PREX1-201ENST00000371941 BLOC1S2Q6QNY1 142 aa16.05■□□□□ 0.16
PREX1-201ENST00000371941 OLFM4Q6UX06 510 aa16.05■□□□□ 0.16
PREX1-201ENST00000371941 CT47B1P0C2W7 299 aaPredicted RBP16.05■□□□□ 0.16
PREX1-201ENST00000371941 WDR33Q9C0J8 1336 aaKnown RBP16.05■□□□□ 0.16
PREX1-201ENST00000371941 KLHL34Q8N239 644 aa16.05■□□□□ 0.16
PREX1-201ENST00000371941 TRIM34Q9BYJ4 488 aa16.05■□□□□ 0.16
PREX1-201ENST00000371941 PRDM10Q9NQV6 1147 aa16.05■□□□□ 0.16
PREX1-201ENST00000371941 SPATA32Q96LK8 384 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 CARD14Q9BXL6 1004 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 MEX3CQ5U5Q3 659 aaKnown RBP16.04■□□□□ 0.16
PREX1-201ENST00000371941 CCDC82Q8N4S0 544 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 TSPYL6Q8N831 410 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 TMX1Q9H3N1 280 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 FOXO3O43524 673 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 DMRT2Q9Y5R5 561 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 AMOTL1Q8IY63 956 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 CCDC158Q5M9N0 1113 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 MEIS3Q99687 375 aa16.04■□□□□ 0.16
PREX1-201ENST00000371941 TPM2P07951 284 aa16.03■□□□□ 0.16
PREX1-201ENST00000371941 MCM2P49736 904 aa16.03■□□□□ 0.16
PREX1-201ENST00000371941 ERC1Q8IUD2 1116 aa16.03■□□□□ 0.16
PREX1-201ENST00000371941 HSP90AB2PQ58FF8 381 aa16.03■□□□□ 0.16
PREX1-201ENST00000371941 CKAP2LQ8IYA6 745 aa16.03■□□□□ 0.16
PREX1-201ENST00000371941 RPAP2Q8IXW5 612 aaPredicted RBP16.02■□□□□ 0.16
PREX1-201ENST00000371941 KAT6BQ8WYB5 2073 aa16.02■□□□□ 0.16
PREX1-201ENST00000371941 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.16
PREX1-201ENST00000371941 SLC4A8Q2Y0W8 1093 aa16.02■□□□□ 0.16
PREX1-201ENST00000371941 TCEANC2Q96MN5 208 aa16.02■□□□□ 0.16
PREX1-201ENST00000371941 TFIP11Q9UBB9 837 aaKnown RBP16.02■□□□□ 0.16
PREX1-201ENST00000371941 ATP2B2Q01814 1243 aa16.02■□□□□ 0.16
PREX1-201ENST00000371941 TBC1D2BQ9UPU7 963 aa16.02■□□□□ 0.16
PREX1-201ENST00000371941 NUP153P49790 1475 aaKnown RBP16.02■□□□□ 0.15
PREX1-201ENST00000371941 WASLO00401 505 aaPredicted RBP16.02■□□□□ 0.15
PREX1-201ENST00000371941 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.15
PREX1-201ENST00000371941 PEG3Q9GZU2 1588 aa16.02■□□□□ 0.15
PREX1-201ENST00000371941 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.15
PREX1-201ENST00000371941 CCT2P78371 535 aaKnown RBP16.02■□□□□ 0.15
PREX1-201ENST00000371941 RPGRIP1LQ68CZ1 1315 aa16.02■□□□□ 0.15
PREX1-201ENST00000371941 CCDC57Q2TAC2 916 aa16.01■□□□□ 0.15
PREX1-201ENST00000371941 HOOK1Q9UJC3 728 aaKnown RBP16.01■□□□□ 0.15
PREX1-201ENST00000371941 CCDC192P0DO97 292 aa16.01■□□□□ 0.15
PREX1-201ENST00000371941 ZNF830Q96NB3 372 aaPredicted RBP16.01■□□□□ 0.15
PREX1-201ENST00000371941 ATP10BO94823 1461 aa16.01■□□□□ 0.15
PREX1-201ENST00000371941 IDH1O75874 414 aaKnown RBP16.01■□□□□ 0.15
PREX1-201ENST00000371941 SERPINC1P01008 464 aa16.01■□□□□ 0.15
PREX1-201ENST00000371941 KRT85P78386 507 aa16.01■□□□□ 0.15
PREX1-201ENST00000371941 ISM2Q6H9L7 571 aa16.01■□□□□ 0.15
PREX1-201ENST00000371941 ZBTB9Q96C00 473 aa16■□□□□ 0.15
PREX1-201ENST00000371941 AMOTL2Q9Y2J4 779 aa16■□□□□ 0.15
PREX1-201ENST00000371941 FANCAO15360 1455 aa16■□□□□ 0.15
PREX1-201ENST00000371941 THEMISQ8N1K5 641 aaPredicted RBP16■□□□□ 0.15
PREX1-201ENST00000371941 NAT10Q9H0A0 1025 aaKnown RBP16■□□□□ 0.15
PREX1-201ENST00000371941 CCDC144CPQ8IYA2 1237 aa16■□□□□ 0.15
PREX1-201ENST00000371941 PRAG1Q86YV5 1406 aa16■□□□□ 0.15
PREX1-201ENST00000371941 ALDH1L2Q3SY69 923 aa16■□□□□ 0.15
PREX1-201ENST00000371941 RALGAPBQ86X10 1494 aa15.99■□□□□ 0.15
PREX1-201ENST00000371941 C14orf93Q9H972 538 aaKnown RBP15.99■□□□□ 0.15
PREX1-201ENST00000371941 MAP3K2Q9Y2U5 619 aa15.99■□□□□ 0.15
PREX1-201ENST00000371941 TESK2Q96S53 571 aa15.99■□□□□ 0.15
PREX1-201ENST00000371941 USP25Q9UHP3 1055 aa15.99■□□□□ 0.15
PREX1-201ENST00000371941 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
PREX1-201ENST00000371941 FLIIQ13045 1269 aa15.99■□□□□ 0.15
PREX1-201ENST00000371941 HIP1O00291 1037 aa15.98■□□□□ 0.15
PREX1-201ENST00000371941 IKQ13123 557 aaPredicted RBP15.98■□□□□ 0.15
PREX1-201ENST00000371941 NECAB1Q8N987 351 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms