RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 AMOTQ4VCS5 1084 aa34■■■■□ 3.03
ATPAF1-202ENST00000371937 LMO7Q8WWI1 1683 aa33.99■■■■□ 3.03
ATPAF1-202ENST00000371937 CSB-PGBD3P0DP91 1061 aa33.99■■■■□ 3.03
ATPAF1-202ENST00000371937 NLRP2Q9NX02 1062 aa33.99■■■■□ 3.03
ATPAF1-202ENST00000371937 BCAR3O75815 825 aa33.98■■■■□ 3.03
ATPAF1-202ENST00000371937 PLEKHO1Q53GL0 409 aaPredicted RBP33.98■■■■□ 3.03
ATPAF1-202ENST00000371937 MAP3K5Q99683 1374 aa33.98■■■■□ 3.03
ATPAF1-202ENST00000371937 MBIPQ9NS73 344 aa33.97■■■■□ 3.03
ATPAF1-202ENST00000371937 CRB1P82279 1406 aa33.94■■■■□ 3.02
ATPAF1-202ENST00000371937 CHL1O00533 1208 aa33.93■■■■□ 3.02
ATPAF1-202ENST00000371937 ZNF428Q96B54 188 aa33.93■■■■□ 3.02
ATPAF1-202ENST00000371937 RAPGEF4Q8WZA2 1011 aa33.91■■■■□ 3.02
ATPAF1-202ENST00000371937 PLEKHG2Q9H7P9 1386 aa33.91■■■■□ 3.02
ATPAF1-202ENST00000371937 COL22A1Q8NFW1 1626 aaPredicted RBP33.9■■■■□ 3.02
ATPAF1-202ENST00000371937 PHLPP1O60346 1717 aa33.89■■■■□ 3.02
ATPAF1-202ENST00000371937 PIP4K2BP78356 416 aa33.88■■■■□ 3.01
ATPAF1-202ENST00000371937 AKAP4Q5JQC9 854 aa33.88■■■■□ 3.01
ATPAF1-202ENST00000371937 WDR17Q8IZU2 1322 aa33.88■■■■□ 3.01
ATPAF1-202ENST00000371937 CANXP27824 592 aaKnown RBP33.88■■■■□ 3.01
ATPAF1-202ENST00000371937 ZNF530Q6P9A1 599 aaPredicted RBP33.88■■■■□ 3.01
ATPAF1-202ENST00000371937 UBAP1LF5GYI3 381 aa33.87■■■■□ 3.01
ATPAF1-202ENST00000371937 IL17REQ8NFR9 667 aa33.86■■■■□ 3.01
ATPAF1-202ENST00000371937 COL5A2P05997 1499 aaPredicted RBP33.86■■■■□ 3.01
ATPAF1-202ENST00000371937 LRRC37A3O60309 1634 aa33.86■■■■□ 3.01
ATPAF1-202ENST00000371937 TATP17735 454 aaPredicted RBP33.86■■■■□ 3.01
ATPAF1-202ENST00000371937 ALDH1L2Q3SY69 923 aa33.86■■■■□ 3.01
ATPAF1-202ENST00000371937 C1orf141Q5JVX7 400 aa33.86■■■■□ 3.01
ATPAF1-202ENST00000371937 EXOC6Q8TAG9 804 aa33.86■■■■□ 3.01
ATPAF1-202ENST00000371937 COL16A1Q07092 1604 aaPredicted RBP33.85■■■■□ 3.01
ATPAF1-202ENST00000371937 PDE3AQ14432 1141 aa33.84■■■■□ 3.01
ATPAF1-202ENST00000371937 C20orf194Q5TEA3 1177 aa33.83■■■■□ 3.01
ATPAF1-202ENST00000371937 SMC4Q9NTJ3 1288 aa33.83■■■■□ 3.01
ATPAF1-202ENST00000371937 BABAM1Q9NWV8 329 aa33.83■■■■□ 3.01
ATPAF1-202ENST00000371937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.83■■■■□ 3.01
ATPAF1-202ENST00000371937 VAMP4O75379 141 aa33.83■■■■□ 3.01
ATPAF1-202ENST00000371937 BCL2L13Q9BXK5 485 aa33.83■■■■□ 3.01
ATPAF1-202ENST00000371937 SSH1Q8WYL5 1049 aa33.82■■■■□ 3
ATPAF1-202ENST00000371937 FRAT1Q92837 279 aaPredicted RBP33.82■■■■□ 3
ATPAF1-202ENST00000371937 CEMIPQ8WUJ3 1361 aa33.82■■■■□ 3
ATPAF1-202ENST00000371937 TWISTNBQ3B726 338 aaPredicted RBP33.81■■■■□ 3
ATPAF1-202ENST00000371937 TOM1L2Q6ZVM7 507 aa33.81■■■■□ 3
ATPAF1-202ENST00000371937 CRBNQ96SW2 442 aa33.81■■■■□ 3
ATPAF1-202ENST00000371937 TSPYL4Q9UJ04 414 aa33.81■■■■□ 3
ATPAF1-202ENST00000371937 SPG7Q9UQ90 795 aa33.81■■■■□ 3
ATPAF1-202ENST00000371937 EVA1CP58658 441 aa33.8■■■■□ 3
ATPAF1-202ENST00000371937 TAF7Q15545 349 aaPredicted RBP33.79■■■■□ 3
ATPAF1-202ENST00000371937 TSPYL6Q8N831 410 aa33.79■■■■□ 3
ATPAF1-202ENST00000371937 C8orf58Q8NAV2 365 aa33.79■■■■□ 3
ATPAF1-202ENST00000371937 MEGF6O75095 1541 aa33.77■■■■□ 3
ATPAF1-202ENST00000371937 CARD10Q9BWT7 1032 aa33.77■■■■□ 3
ATPAF1-202ENST00000371937 OVOS2A0A0G2JMS6 1433 aa33.76■■■■□ 3
ATPAF1-202ENST00000371937 COL14A1Q05707 1796 aaKnown RBP33.76■■■□□ 2.99
ATPAF1-202ENST00000371937 BRPF1P55201 1214 aaPredicted RBP33.76■■■□□ 2.99
ATPAF1-202ENST00000371937 KIF16BQ96L93 1317 aa33.75■■■□□ 2.99
ATPAF1-202ENST00000371937 ELL2O00472 640 aaPredicted RBP33.75■■■□□ 2.99
ATPAF1-202ENST00000371937 ZKSCAN2Q63HK3 967 aa33.75■■■□□ 2.99
ATPAF1-202ENST00000371937 MIS18AQ9NYP9 233 aa33.75■■■□□ 2.99
ATPAF1-202ENST00000371937 MS4A1P11836 297 aa33.74■■■□□ 2.99
ATPAF1-202ENST00000371937 B4GALNT3Q6L9W6 998 aa33.74■■■□□ 2.99
ATPAF1-202ENST00000371937 CCDC136Q96JN2 1154 aa33.74■■■□□ 2.99
ATPAF1-202ENST00000371937 STRN4Q9NRL3 753 aa33.74■■■□□ 2.99
ATPAF1-202ENST00000371937 LGR6Q9HBX8 967 aa33.74■■■□□ 2.99
ATPAF1-202ENST00000371937 CERKQ8TCT0 537 aa33.73■■■□□ 2.99
ATPAF1-202ENST00000371937 MPRIPQ6WCQ1 1025 aa33.72■■■□□ 2.99
ATPAF1-202ENST00000371937 PELP1Q8IZL8 1130 aaKnown RBP33.72■■■□□ 2.99
ATPAF1-202ENST00000371937 BTG4Q9NY30 223 aa33.72■■■□□ 2.99
ATPAF1-202ENST00000371937 IPO8O15397 1037 aaKnown RBP33.72■■■□□ 2.99
ATPAF1-202ENST00000371937 RNMTO43148 476 aaKnown RBP33.72■■■□□ 2.99
ATPAF1-202ENST00000371937 TEFQ10587 303 aa33.72■■■□□ 2.99
ATPAF1-202ENST00000371937 LARP1Q6PKG0 1096 aaKnown RBP33.71■■■□□ 2.99
ATPAF1-202ENST00000371937 IFNL2Q8IZJ0 200 aa33.69■■■□□ 2.98
ATPAF1-202ENST00000371937 NOB1Q9ULX3 412 aaKnown RBP33.68■■■□□ 2.98
ATPAF1-202ENST00000371937 PKD1L3Q7Z443 1732 aa33.68■■■□□ 2.98
ATPAF1-202ENST00000371937 PHKG2P15735 406 aa33.67■■■□□ 2.98
ATPAF1-202ENST00000371937 PARP4Q9UKK3 1724 aaKnown RBP33.67■■■□□ 2.98
ATPAF1-202ENST00000371937 MRPL50Q8N5N7 158 aaKnown RBP33.67■■■□□ 2.98
ATPAF1-202ENST00000371937 PANK1Q8TE04 598 aa33.67■■■□□ 2.98
ATPAF1-202ENST00000371937 SOS1Q07889 1333 aaPredicted RBP33.66■■■□□ 2.98
ATPAF1-202ENST00000371937 KRT24Q2M2I5 525 aa33.66■■■□□ 2.98
ATPAF1-202ENST00000371937 ATF7IPQ6VMQ6 1270 aa33.66■■■□□ 2.98
ATPAF1-202ENST00000371937 IL2RBP14784 551 aa33.65■■■□□ 2.98
ATPAF1-202ENST00000371937 ADAMTS7Q9UKP4 1686 aa33.65■■■□□ 2.98
ATPAF1-202ENST00000371937 FTSJ3Q8IY81 847 aaKnown RBP33.65■■■□□ 2.98
ATPAF1-202ENST00000371937 DZIP1LQ8IYY4 767 aaKnown RBP33.65■■■□□ 2.98
ATPAF1-202ENST00000371937 HSP90AB1P08238 724 aaKnown RBP33.64■■■□□ 2.98
ATPAF1-202ENST00000371937 ARHGAP45Q92619 1136 aa33.63■■■□□ 2.97
ATPAF1-202ENST00000371937 VIRMAQ69YN4 1812 aaKnown RBP33.62■■■□□ 2.97
ATPAF1-202ENST00000371937 TRIM27P14373 513 aa33.62■■■□□ 2.97
ATPAF1-202ENST00000371937 COG6Q9Y2V7 657 aa33.62■■■□□ 2.97
ATPAF1-202ENST00000371937 BTBD11A6QL63 1104 aa33.61■■■□□ 2.97
ATPAF1-202ENST00000371937 ZCRB1Q8TBF4 217 aaKnown RBP33.61■■■□□ 2.97
ATPAF1-202ENST00000371937 CYP27B1O15528 508 aa33.6■■■□□ 2.97
ATPAF1-202ENST00000371937 ADAMTS2O95450 1211 aa33.6■■■□□ 2.97
ATPAF1-202ENST00000371937 AAMPQ13685 434 aa33.6■■■□□ 2.97
ATPAF1-202ENST00000371937 CLUAP1Q96AJ1 413 aa33.6■■■□□ 2.97
ATPAF1-202ENST00000371937 DCAF5Q96JK2 942 aa33.6■■■□□ 2.97
ATPAF1-202ENST00000371937 RLBP1P12271 317 aa33.6■■■□□ 2.97
ATPAF1-202ENST00000371937 PCDH11XQ9BZA7 1347 aa33.59■■■□□ 2.97
ATPAF1-202ENST00000371937 PCDH11YQ9BZA8 1340 aa33.59■■■□□ 2.97
ATPAF1-202ENST00000371937 TNNQ9UQP3 1299 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms