RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 RSPH4AQ5TD94 716 aa10.7□□□□□ -0.7
SMARCA1-203ENST00000371123 CERS3Q8IU89 383 aa10.7□□□□□ -0.7
SMARCA1-203ENST00000371123 SPAG9O60271 1321 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-203ENST00000371123 ATAD2Q6PL18 1390 aa10.7□□□□□ -0.7
SMARCA1-203ENST00000371123 CTIFO43310 598 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-203ENST00000371123 EXOSC9Q06265 439 aaKnown RBP10.7□□□□□ -0.7
SMARCA1-203ENST00000371123 ST7Q9NRC1 585 aa10.7□□□□□ -0.7
SMARCA1-203ENST00000371123 NCBP1Q09161 790 aaKnown RBP10.69□□□□□ -0.7
SMARCA1-203ENST00000371123 ZKSCAN2Q63HK3 967 aa10.69□□□□□ -0.7
SMARCA1-203ENST00000371123 KIAA2012Q0VF49 1180 aa10.69□□□□□ -0.7
SMARCA1-203ENST00000371123 NUTM2GQ5VZR2 741 aa10.69□□□□□ -0.7
SMARCA1-203ENST00000371123 ZBTB9Q96C00 473 aa10.69□□□□□ -0.7
SMARCA1-203ENST00000371123 USP26Q9BXU7 913 aa10.69□□□□□ -0.7
SMARCA1-203ENST00000371123 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
SMARCA1-203ENST00000371123 C16orf71Q8IYS4 520 aaPredicted RBP10.69□□□□□ -0.7
SMARCA1-203ENST00000371123 NFATC2IPQ8NCF5 419 aa10.68□□□□□ -0.7
SMARCA1-203ENST00000371123 OTUD7AQ8TE49 926 aaPredicted RBP10.68□□□□□ -0.7
SMARCA1-203ENST00000371123 WDR63Q8IWG1 891 aa10.68□□□□□ -0.7
SMARCA1-203ENST00000371123 RUNDC1Q96C34 613 aa10.68□□□□□ -0.7
SMARCA1-203ENST00000371123 ATP10AO60312 1499 aa10.68□□□□□ -0.7
SMARCA1-203ENST00000371123 GDPD2Q9HCC8 539 aa10.68□□□□□ -0.7
SMARCA1-203ENST00000371123 CTNNA3Q9UI47 895 aa10.68□□□□□ -0.7
SMARCA1-203ENST00000371123 MED14O60244 1454 aa10.68□□□□□ -0.7
SMARCA1-203ENST00000371123 USP25Q9UHP3 1055 aa10.67□□□□□ -0.7
SMARCA1-203ENST00000371123 EFCAB2Q5VUJ9 269 aa10.67□□□□□ -0.7
SMARCA1-203ENST00000371123 ATF7IPQ6VMQ6 1270 aa10.67□□□□□ -0.7
SMARCA1-203ENST00000371123 SCAF11Q99590 1463 aaKnown RBP10.67□□□□□ -0.7
SMARCA1-203ENST00000371123 PDCL2Q8N4E4 241 aa10.67□□□□□ -0.7
SMARCA1-203ENST00000371123 PRIMPOLQ96LW4 560 aa10.67□□□□□ -0.7
SMARCA1-203ENST00000371123 DCTN1Q14203 1278 aa10.66□□□□□ -0.7
SMARCA1-203ENST00000371123 ERBB3P21860 1342 aa10.66□□□□□ -0.7
SMARCA1-203ENST00000371123 KIF3AQ9Y496 699 aa10.66□□□□□ -0.7
SMARCA1-203ENST00000371123 TRIM6-TRIM34B2RNG4 842 aa10.66□□□□□ -0.7
SMARCA1-203ENST00000371123 NEURL4Q96JN8 1562 aa10.66□□□□□ -0.7
SMARCA1-203ENST00000371123 GOLGA6L22H0YM25 854 aa10.65□□□□□ -0.7
SMARCA1-203ENST00000371123 PLEKHF1Q96S99 279 aa10.65□□□□□ -0.7
SMARCA1-203ENST00000371123 TUBGCP6Q96RT7 1819 aa10.65□□□□□ -0.7
SMARCA1-203ENST00000371123 TULP2O00295 520 aa10.65□□□□□ -0.7
SMARCA1-203ENST00000371123 CCDC27Q2M243 656 aa10.65□□□□□ -0.7
SMARCA1-203ENST00000371123 MIS18AQ9NYP9 233 aa10.65□□□□□ -0.7
SMARCA1-203ENST00000371123 ZBTB7BO15156 539 aaPredicted RBP10.65□□□□□ -0.7
SMARCA1-203ENST00000371123 PTMSP20962 102 aa10.65□□□□□ -0.7
SMARCA1-203ENST00000371123 KIAA1524Q8TCG1 905 aa10.65□□□□□ -0.7
SMARCA1-203ENST00000371123 LARP6Q9BRS8 491 aaKnown RBP10.65□□□□□ -0.71
SMARCA1-203ENST00000371123 CHMP4AQ9BY43 222 aa10.65□□□□□ -0.71
SMARCA1-203ENST00000371123 FAM53CQ9NYF3 392 aa10.65□□□□□ -0.71
SMARCA1-203ENST00000371123 ZNF142P52746 1687 aaPredicted RBP10.64□□□□□ -0.71
SMARCA1-203ENST00000371123 RILPL2Q969X0 211 aa10.64□□□□□ -0.71
SMARCA1-203ENST00000371123 KCNJ4P48050 445 aa10.64□□□□□ -0.71
SMARCA1-203ENST00000371123 FER1L4A9Z1Z3 1794 aa10.64□□□□□ -0.71
SMARCA1-203ENST00000371123 ADCY5O95622 1261 aa10.64□□□□□ -0.71
SMARCA1-203ENST00000371123 PLEKHM2Q8IWE5 1019 aa10.64□□□□□ -0.71
SMARCA1-203ENST00000371123 TET3O43151 1660 aa10.63□□□□□ -0.71
SMARCA1-203ENST00000371123 OS9Q13438 667 aaPredicted RBP10.63□□□□□ -0.71
SMARCA1-203ENST00000371123 DDX54Q8TDD1 881 aaKnown RBP10.63□□□□□ -0.71
SMARCA1-203ENST00000371123 CHMP4CQ96CF2 233 aa10.63□□□□□ -0.71
SMARCA1-203ENST00000371123 FUCA2Q9BTY2 467 aa10.63□□□□□ -0.71
SMARCA1-203ENST00000371123 PIK3C2BO00750 1634 aa10.62□□□□□ -0.71
SMARCA1-203ENST00000371123 YEATS2Q9ULM3 1422 aa10.62□□□□□ -0.71
SMARCA1-203ENST00000371123 DDX41Q9UJV9 622 aaKnown RBP10.62□□□□□ -0.71
SMARCA1-203ENST00000371123 DDX19BQ9UMR2 479 aa10.62□□□□□ -0.71
SMARCA1-203ENST00000371123 CAMSAP1Q5T5Y3 1602 aa10.62□□□□□ -0.71
SMARCA1-203ENST00000371123 NSD3Q9BZ95 1437 aa10.62□□□□□ -0.71
SMARCA1-203ENST00000371123 TERF2Q15554 542 aa10.62□□□□□ -0.71
SMARCA1-203ENST00000371123 TSHZ3Q63HK5 1081 aa10.62□□□□□ -0.71
SMARCA1-203ENST00000371123 BRD1O95696 1058 aa10.61□□□□□ -0.71
SMARCA1-203ENST00000371123 NGEFQ8N5V2 710 aa10.61□□□□□ -0.71
SMARCA1-203ENST00000371123 TSPY26PQ9H489 355 aa10.61□□□□□ -0.71
SMARCA1-203ENST00000371123 TAF7LQ5H9L4 462 aa10.61□□□□□ -0.71
SMARCA1-203ENST00000371123 ZFP91Q96JP5 570 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-203ENST00000371123 HCLS1P14317 486 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-203ENST00000371123 ZNF330Q9Y3S2 320 aaPredicted RBP10.61□□□□□ -0.71
SMARCA1-203ENST00000371123 PTPRTO14522 1441 aa10.61□□□□□ -0.71
SMARCA1-203ENST00000371123 COL3A1P02461 1466 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 FOSBP53539 338 aa10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 NUCB2P80303 420 aa10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 RBM33Q96EV2 1170 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 ZNF446Q9NWS9 450 aa10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 C3P01024 1663 aa10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 UGGT1Q9NYU2 1555 aa10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 MAP4K4O95819 1239 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 FBXW7Q969H0 707 aa10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 MORC2Q9Y6X9 1032 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 RBM6P78332 1123 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 ZNF771Q7L3S4 317 aaPredicted RBP10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 OGFRQ9NZT2 677 aa10.6□□□□□ -0.71
SMARCA1-203ENST00000371123 KIF18AQ8NI77 898 aa10.59□□□□□ -0.71
SMARCA1-203ENST00000371123 TRERF1Q96PN7 1200 aa10.59□□□□□ -0.71
SMARCA1-203ENST00000371123 PALD1Q9ULE6 856 aa10.59□□□□□ -0.71
SMARCA1-203ENST00000371123 MYO3AQ8NEV4 1616 aa10.59□□□□□ -0.71
SMARCA1-203ENST00000371123 USP48Q86UV5 1035 aa10.59□□□□□ -0.71
SMARCA1-203ENST00000371123 EIF2S2P20042 333 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-203ENST00000371123 LRMPQ12912 555 aa10.59□□□□□ -0.71
SMARCA1-203ENST00000371123 RRS1Q15050 365 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-203ENST00000371123 RABEP1Q15276 862 aa10.59□□□□□ -0.71
SMARCA1-203ENST00000371123 KMT5BQ4FZB7 885 aa10.58□□□□□ -0.72
SMARCA1-203ENST00000371123 TSPYL6Q8N831 410 aa10.58□□□□□ -0.72
SMARCA1-203ENST00000371123 SPATA31D1Q6ZQQ2 1576 aa10.58□□□□□ -0.72
SMARCA1-203ENST00000371123 ABCC3O15438 1527 aa10.58□□□□□ -0.72
SMARCA1-203ENST00000371123 ADGRF5Q8IZF2 1346 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms