RNA–Protein interactions for RNA: ENST00000370126.1

RTCA-202, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-202ENST00000370126 ZCRB1Q8TBF4 217 aaKnown RBP29.92■■■□□ 2.38
RTCA-202ENST00000370126 STK32BQ9NY57 414 aa29.92■■■□□ 2.38
RTCA-202ENST00000370126 HSPA5P11021 654 aaKnown RBP29.91■■■□□ 2.38
RTCA-202ENST00000370126 USHBP1Q8N6Y0 703 aa29.91■■■□□ 2.38
RTCA-202ENST00000370126 POLR3GLQ9BT43 218 aa29.91■■■□□ 2.38
RTCA-202ENST00000370126 EMILIN1Q9Y6C2 1016 aa29.9■■■□□ 2.38
RTCA-202ENST00000370126 CGNL1Q0VF96 1302 aa29.9■■■□□ 2.38
RTCA-202ENST00000370126 SLC15A2Q16348 729 aa29.89■■■□□ 2.38
RTCA-202ENST00000370126 PDGFDQ9GZP0 370 aaPredicted RBP29.89■■■□□ 2.38
RTCA-202ENST00000370126 RAPGEF4Q8WZA2 1011 aa29.87■■■□□ 2.37
RTCA-202ENST00000370126 MAP2P11137 1827 aaKnown RBP29.87■■■□□ 2.37
RTCA-202ENST00000370126 PPP1R1BQ9UD71 204 aaPredicted RBP29.84■■■□□ 2.37
RTCA-202ENST00000370126 NSD2O96028 1365 aa29.84■■■□□ 2.37
RTCA-202ENST00000370126 TATP17735 454 aaPredicted RBP29.83■■■□□ 2.37
RTCA-202ENST00000370126 PRIM1P49642 420 aaKnown RBP29.83■■■□□ 2.37
RTCA-202ENST00000370126 SYTL4Q96C24 671 aaPredicted RBP29.82■■■□□ 2.36
RTCA-202ENST00000370126 LRRC4BQ9NT99 713 aa29.82■■■□□ 2.36
RTCA-202ENST00000370126 NCAPD2Q15021 1401 aa29.81■■■□□ 2.36
RTCA-202ENST00000370126 ZBTB7AO95365 584 aa29.81■■■□□ 2.36
RTCA-202ENST00000370126 LY75O60449 1722 aa29.81■■■□□ 2.36
RTCA-202ENST00000370126 PPM1GO15355 546 aaPredicted RBP29.8■■■□□ 2.36
RTCA-202ENST00000370126 PKD1L3Q7Z443 1732 aa29.79■■■□□ 2.36
RTCA-202ENST00000370126 WASHC2AQ641Q2 1341 aa29.79■■■□□ 2.36
RTCA-202ENST00000370126 SLC27A3Q5K4L6 730 aa29.79■■■□□ 2.36
RTCA-202ENST00000370126 ZNF827Q17R98 1081 aa29.78■■■□□ 2.36
RTCA-202ENST00000370126 PCDH11XQ9BZA7 1347 aa29.77■■■□□ 2.36
RTCA-202ENST00000370126 PCDH11YQ9BZA8 1340 aa29.77■■■□□ 2.36
RTCA-202ENST00000370126 PANK3Q9H999 370 aa29.77■■■□□ 2.36
RTCA-202ENST00000370126 POLKQ9UBT6 870 aa29.77■■■□□ 2.36
RTCA-202ENST00000370126 QSER1Q2KHR3 1735 aa29.76■■■□□ 2.35
RTCA-202ENST00000370126 PTGER2P43116 358 aa29.75■■■□□ 2.35
RTCA-202ENST00000370126 ATF5Q9Y2D1 282 aaPredicted RBP29.75■■■□□ 2.35
RTCA-202ENST00000370126 MTFR1LQ9H019 292 aa29.74■■■□□ 2.35
RTCA-202ENST00000370126 AKT1S1Q96B36 256 aa29.73■■■□□ 2.35
RTCA-202ENST00000370126 TOGARAM1Q9Y4F4 1720 aa29.72■■■□□ 2.35
RTCA-202ENST00000370126 TUBGCP6Q96RT7 1819 aa29.71■■■□□ 2.35
RTCA-202ENST00000370126 CYP27B1O15528 508 aa29.71■■■□□ 2.35
RTCA-202ENST00000370126 TNNT2P45379 298 aaPredicted RBP29.71■■■□□ 2.35
RTCA-202ENST00000370126 EYA1Q99502 592 aa29.7■■■□□ 2.35
RTCA-202ENST00000370126 KCNQ4P56696 695 aa29.69■■■□□ 2.34
RTCA-202ENST00000370126 SGIP1Q9BQI5 828 aa29.68■■■□□ 2.34
RTCA-202ENST00000370126 ITGB4P16144 1822 aa29.67■■■□□ 2.34
RTCA-202ENST00000370126 EIF4A2Q14240 407 aaKnown RBP29.66■■■□□ 2.34
RTCA-202ENST00000370126 CCNL1Q9UK58 526 aaPredicted RBP29.66■■■□□ 2.34
RTCA-202ENST00000370126 SPG7Q9UQ90 795 aa29.64■■■□□ 2.34
RTCA-202ENST00000370126 PNPLA7Q6ZV29 1317 aa29.63■■■□□ 2.33
RTCA-202ENST00000370126 NKX1-1Q15270 411 aaPredicted RBP29.62■■■□□ 2.33
RTCA-202ENST00000370126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.62■■■□□ 2.33
RTCA-202ENST00000370126 C5P01031 1676 aa29.62■■■□□ 2.33
RTCA-202ENST00000370126 COL24A1Q17RW2 1714 aa29.62■■■□□ 2.33
RTCA-202ENST00000370126 MPRIPQ6WCQ1 1025 aa29.61■■■□□ 2.33
RTCA-202ENST00000370126 TFCP2L1Q9NZI6 479 aa29.61■■■□□ 2.33
RTCA-202ENST00000370126 SLC16A10Q8TF71 515 aa29.6■■■□□ 2.33
RTCA-202ENST00000370126 KIF7Q2M1P5 1343 aa29.6■■■□□ 2.33
RTCA-202ENST00000370126 MORC1Q86VD1 984 aa29.59■■■□□ 2.33
RTCA-202ENST00000370126 FHDC1Q9C0D6 1143 aaPredicted RBP29.59■■■□□ 2.33
RTCA-202ENST00000370126 IGSF1Q8N6C5 1336 aa29.59■■■□□ 2.33
RTCA-202ENST00000370126 PALLDQ8WX93 1383 aa29.59■■■□□ 2.33
RTCA-202ENST00000370126 PLEKHG2Q9H7P9 1386 aa29.59■■■□□ 2.33
RTCA-202ENST00000370126 TAF1LQ8IZX4 1826 aa29.59■■■□□ 2.33
RTCA-202ENST00000370126 KNSTRNQ9Y448 316 aa29.58■■■□□ 2.33
RTCA-202ENST00000370126 ARXQ96QS3 562 aa29.57■■■□□ 2.32
RTCA-202ENST00000370126 DCAF8L1A6NGE4 600 aa29.56■■■□□ 2.32
RTCA-202ENST00000370126 SYT17Q9BSW7 474 aa29.56■■■□□ 2.32
RTCA-202ENST00000370126 PHKG2P15735 406 aa29.54■■■□□ 2.32
RTCA-202ENST00000370126 IFNL2Q8IZJ0 200 aa29.54■■■□□ 2.32
RTCA-202ENST00000370126 PIGBQ92521 554 aa29.54■■■□□ 2.32
RTCA-202ENST00000370126 SMARCC1Q92922 1105 aaPredicted RBP29.54■■■□□ 2.32
RTCA-202ENST00000370126 MAP3K5Q99683 1374 aa29.52■■■□□ 2.32
RTCA-202ENST00000370126 AMER1Q5JTC6 1135 aaPredicted RBP29.52■■■□□ 2.32
RTCA-202ENST00000370126 HMGB2P26583 209 aaKnown RBP29.5■■■□□ 2.31
RTCA-202ENST00000370126 C4BP0C0L5 1744 aa29.5■■■□□ 2.31
RTCA-202ENST00000370126 POLD1P28340 1107 aa29.48■■■□□ 2.31
RTCA-202ENST00000370126 COL23A1Q86Y22 540 aaPredicted RBP29.48■■■□□ 2.31
RTCA-202ENST00000370126 TMOD3Q9NYL9 352 aa29.48■■■□□ 2.31
RTCA-202ENST00000370126 YY1P25490 414 aa29.46■■■□□ 2.31
RTCA-202ENST00000370126 UTRNP46939 3433 aa29.45■■■□□ 2.31
RTCA-202ENST00000370126 MSH5O43196 834 aa29.44■■■□□ 2.3
RTCA-202ENST00000370126 AEBP1Q8IUX7 1158 aa29.44■■■□□ 2.3
RTCA-202ENST00000370126 UBR3Q6ZT12 1888 aa29.43■■■□□ 2.3
RTCA-202ENST00000370126 PLEKHO1Q53GL0 409 aaPredicted RBP29.43■■■□□ 2.3
RTCA-202ENST00000370126 ASAP1Q9ULH1 1129 aa29.43■■■□□ 2.3
RTCA-202ENST00000370126 LOC102724428A0A0B4J2F2 783 aa29.42■■■□□ 2.3
RTCA-202ENST00000370126 PER1O15534 1290 aaPredicted RBP29.42■■■□□ 2.3
RTCA-202ENST00000370126 SIK1P57059 783 aa29.42■■■□□ 2.3
RTCA-202ENST00000370126 KDRP35968 1356 aa29.41■■■□□ 2.3
RTCA-202ENST00000370126 IL13P35225 146 aa29.41■■■□□ 2.3
RTCA-202ENST00000370126 AMOTQ4VCS5 1084 aa29.41■■■□□ 2.3
RTCA-202ENST00000370126 FLAD1Q8NFF5 587 aa29.41■■■□□ 2.3
RTCA-202ENST00000370126 HSP90AB1P08238 724 aaKnown RBP29.4■■■□□ 2.3
RTCA-202ENST00000370126 ZNF530Q6P9A1 599 aaPredicted RBP29.4■■■□□ 2.3
RTCA-202ENST00000370126 AK7Q96M32 723 aa29.4■■■□□ 2.3
RTCA-202ENST00000370126 KDM6AO15550 1401 aaPredicted RBP29.39■■■□□ 2.3
RTCA-202ENST00000370126 SULT6B1Q6IMI4 303 aa29.39■■■□□ 2.3
RTCA-202ENST00000370126 DCAF5Q96JK2 942 aa29.39■■■□□ 2.3
RTCA-202ENST00000370126 ATG3Q9NT62 314 aa29.39■■■□□ 2.3
RTCA-202ENST00000370126 ERVV-2B6SEH9 535 aa29.38■■■□□ 2.29
RTCA-202ENST00000370126 KLHL34Q8N239 644 aa29.38■■■□□ 2.29
RTCA-202ENST00000370126 MSL1Q68DK7 614 aa29.37■■■□□ 2.29
RTCA-202ENST00000370126 AMIGO3Q86WK7 504 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms