RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.63■□□□□ 0.89
DKC1-201ENST00000369550 TULP4Q9NRJ4 1543 aa20.63■□□□□ 0.89
DKC1-201ENST00000369550 APBB1O00213 710 aa20.63■□□□□ 0.89
DKC1-201ENST00000369550 FYB1O15117 783 aa20.63■□□□□ 0.89
DKC1-201ENST00000369550 REC8O95072 547 aa20.63■□□□□ 0.89
DKC1-201ENST00000369550 ZFYVE9O95405 1425 aa20.62■□□□□ 0.89
DKC1-201ENST00000369550 DCTPP1Q9H773 170 aa20.62■□□□□ 0.89
DKC1-201ENST00000369550 AGLP35573 1532 aa20.62■□□□□ 0.89
DKC1-201ENST00000369550 SDSP20132 328 aa20.62■□□□□ 0.89
DKC1-201ENST00000369550 ATAD2Q6PL18 1390 aa20.62■□□□□ 0.89
DKC1-201ENST00000369550 OTUD7AQ8TE49 926 aaPredicted RBP20.61■□□□□ 0.89
DKC1-201ENST00000369550 API5Q9BZZ5 524 aaKnown RBP20.61■□□□□ 0.89
DKC1-201ENST00000369550 MYRIPQ8NFW9 859 aa20.61■□□□□ 0.89
DKC1-201ENST00000369550 SYAP1Q96A49 352 aaPredicted RBP20.61■□□□□ 0.89
DKC1-201ENST00000369550 TMEM131LA2VDJ0 1609 aa20.6■□□□□ 0.89
DKC1-201ENST00000369550 GNAI1P63096 354 aa20.6■□□□□ 0.89
DKC1-201ENST00000369550 TWISTNBQ3B726 338 aaPredicted RBP20.6■□□□□ 0.89
DKC1-201ENST00000369550 MPNDQ8N594 471 aa20.6■□□□□ 0.89
DKC1-201ENST00000369550 TERF2IPQ9NYB0 399 aa20.6■□□□□ 0.89
DKC1-201ENST00000369550 NEK4P51957 841 aa20.58■□□□□ 0.89
DKC1-201ENST00000369550 MBIPQ9NS73 344 aa20.58■□□□□ 0.89
DKC1-201ENST00000369550 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
DKC1-201ENST00000369550 MYO5BQ9ULV0 1848 aa20.58■□□□□ 0.89
DKC1-201ENST00000369550 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.88
DKC1-201ENST00000369550 HMOX1P09601 288 aa20.57■□□□□ 0.88
DKC1-201ENST00000369550 JARID2Q92833 1246 aaPredicted RBP20.57■□□□□ 0.88
DKC1-201ENST00000369550 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
DKC1-201ENST00000369550 TSC1Q92574 1164 aa20.57■□□□□ 0.88
DKC1-201ENST00000369550 STK26Q9P289 416 aa20.57■□□□□ 0.88
DKC1-201ENST00000369550 ARHGEF28Q8N1W1 1705 aaKnown RBP20.57■□□□□ 0.88
DKC1-201ENST00000369550 ERC2O15083 957 aa20.56■□□□□ 0.88
DKC1-201ENST00000369550 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
DKC1-201ENST00000369550 HMGN5P82970 282 aaKnown RBP20.56■□□□□ 0.88
DKC1-201ENST00000369550 TMX3Q96JJ7 454 aa20.56■□□□□ 0.88
DKC1-201ENST00000369550 PHACTR3Q96KR7 559 aa20.56■□□□□ 0.88
DKC1-201ENST00000369550 PRIMPOLQ96LW4 560 aa20.56■□□□□ 0.88
DKC1-201ENST00000369550 IFT57Q9NWB7 429 aa20.56■□□□□ 0.88
DKC1-201ENST00000369550 PHF14O94880 888 aa20.56■□□□□ 0.88
DKC1-201ENST00000369550 DMTNQ08495 405 aa20.56■□□□□ 0.88
DKC1-201ENST00000369550 FOXD4L6Q3SYB3 417 aaPredicted RBP20.56■□□□□ 0.88
DKC1-201ENST00000369550 FOXD4L3Q6VB84 417 aaPredicted RBP20.56■□□□□ 0.88
DKC1-201ENST00000369550 ZNF830Q96NB3 372 aaPredicted RBP20.56■□□□□ 0.88
DKC1-201ENST00000369550 LRRC7Q96NW7 1537 aa20.55■□□□□ 0.88
DKC1-201ENST00000369550 NOLC1Q14978 699 aaKnown RBP eCLIP20.54■□□□□ 0.882e-65■■■■□ 24.7
DKC1-201ENST00000369550 NOL8Q76FK4 1167 aaKnown RBP20.54■□□□□ 0.88
DKC1-201ENST00000369550 PNPLA6Q8IY17 1366 aa20.54■□□□□ 0.88
DKC1-201ENST00000369550 BRD1O95696 1058 aa20.53■□□□□ 0.88
DKC1-201ENST00000369550 UTP14CQ5TAP6 766 aaKnown RBP20.53■□□□□ 0.88
DKC1-201ENST00000369550 C8orf58Q8NAV2 365 aa20.53■□□□□ 0.88
DKC1-201ENST00000369550 PIBF1Q8WXW3 757 aa20.53■□□□□ 0.88
DKC1-201ENST00000369550 KIF13AQ9H1H9 1805 aa20.53■□□□□ 0.88
DKC1-201ENST00000369550 FAM135BQ49AJ0 1406 aa20.53■□□□□ 0.88
DKC1-201ENST00000369550 A0A0U1RQG5 324 aaPredicted RBP20.52■□□□□ 0.88
DKC1-201ENST00000369550 ZSCAN20P17040 1043 aaPredicted RBP20.52■□□□□ 0.88
DKC1-201ENST00000369550 CBX1P83916 185 aa20.52■□□□□ 0.88
DKC1-201ENST00000369550 ANKRD44Q8N8A2 993 aa20.52■□□□□ 0.88
DKC1-201ENST00000369550 FBXO31Q5XUX0 539 aaPredicted RBP20.52■□□□□ 0.88
DKC1-201ENST00000369550 USP25Q9UHP3 1055 aa20.52■□□□□ 0.88
DKC1-201ENST00000369550 CLTCQ00610 1675 aaKnown RBP20.51■□□□□ 0.87
DKC1-201ENST00000369550 HDGFL2Q7Z4V5 671 aaPredicted RBP20.51■□□□□ 0.87
DKC1-201ENST00000369550 GDPD2Q9HCC8 539 aa20.51■□□□□ 0.87
DKC1-201ENST00000369550 FBLN1P23142 703 aa20.51■□□□□ 0.87
DKC1-201ENST00000369550 ZNF710Q8N1W2 664 aa20.51■□□□□ 0.87
DKC1-201ENST00000369550 FAM184AQ8NB25 1140 aa20.51■□□□□ 0.87
DKC1-201ENST00000369550 MINK1Q8N4C8 1332 aaPredicted RBP20.51■□□□□ 0.87
DKC1-201ENST00000369550 MCM2P49736 904 aa20.5■□□□□ 0.87
DKC1-201ENST00000369550 RPAP2Q8IXW5 612 aaPredicted RBP20.5■□□□□ 0.87
DKC1-201ENST00000369550 TTC12Q9H892 705 aaPredicted RBP20.5■□□□□ 0.87
DKC1-201ENST00000369550 KIF3AQ9Y496 699 aa20.5■□□□□ 0.87
DKC1-201ENST00000369550 ARHGEF40Q8TER5 1519 aa20.5■□□□□ 0.87
DKC1-201ENST00000369550 C17orf53Q8N3J3 647 aaPredicted RBP20.5■□□□□ 0.87
DKC1-201ENST00000369550 FAM177BA6PVY3 158 aa20.49■□□□□ 0.87
DKC1-201ENST00000369550 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
DKC1-201ENST00000369550 TPRNQ4KMQ1 711 aa20.49■□□□□ 0.87
DKC1-201ENST00000369550 CEP85Q6P2H3 762 aa20.49■□□□□ 0.87
DKC1-201ENST00000369550 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
DKC1-201ENST00000369550 ZNF853P0CG23 659 aa20.48■□□□□ 0.87
DKC1-201ENST00000369550 GADD45BO75293 160 aaPredicted RBP20.48■□□□□ 0.87
DKC1-201ENST00000369550 SPATA31D1Q6ZQQ2 1576 aa20.47■□□□□ 0.87
DKC1-201ENST00000369550 ADCY5O95622 1261 aa20.47■□□□□ 0.87
DKC1-201ENST00000369550 GTF2F1P35269 517 aaKnown RBP eCLIP20.47■□□□□ 0.87
DKC1-201ENST00000369550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.47■□□□□ 0.87
DKC1-201ENST00000369550 KNDC1Q76NI1 1749 aa20.47■□□□□ 0.87
DKC1-201ENST00000369550 UVSSAQ2YD98 709 aa20.47■□□□□ 0.87
DKC1-201ENST00000369550 MCCP23508 829 aa20.46■□□□□ 0.87
DKC1-201ENST00000369550 PLCB2Q00722 1185 aa20.46■□□□□ 0.87
DKC1-201ENST00000369550 USP48Q86UV5 1035 aa20.46■□□□□ 0.87
DKC1-201ENST00000369550 POLKQ9UBT6 870 aa20.46■□□□□ 0.87
DKC1-201ENST00000369550 ATP10DQ9P241 1426 aa20.45■□□□□ 0.86
DKC1-201ENST00000369550 LMOD3Q0VAK6 560 aa20.45■□□□□ 0.86
DKC1-201ENST00000369550 CUL4AQ13619 759 aa20.44■□□□□ 0.86
DKC1-201ENST00000369550 INTS4Q96HW7 963 aaKnown RBP20.44■□□□□ 0.86
DKC1-201ENST00000369550 GTPBP4Q9BZE4 634 aaKnown RBP20.44■□□□□ 0.86
DKC1-201ENST00000369550 FAM83GA6ND36 823 aa20.43■□□□□ 0.86
DKC1-201ENST00000369550 FKBP5Q13451 457 aaPredicted RBP20.43■□□□□ 0.86
DKC1-201ENST00000369550 STAG3Q9UJ98 1225 aa20.43■□□□□ 0.86
DKC1-201ENST00000369550 PLEKHG5O94827 1062 aa20.43■□□□□ 0.86
DKC1-201ENST00000369550 HCLS1P14317 486 aaPredicted RBP20.43■□□□□ 0.86
DKC1-201ENST00000369550 ATP2B3Q16720 1220 aa20.43■□□□□ 0.86
DKC1-201ENST00000369550 PRAM1Q96QH2 718 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms