RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 DTNBO60941 627 aa15.02■□□□□ -0
PHGDH-201ENST00000369407 TMX3Q96JJ7 454 aa15.02■□□□□ -0
PHGDH-201ENST00000369407 MEIS3Q99687 375 aa15.02■□□□□ -0
PHGDH-201ENST00000369407 IDI1Q13907 227 aa15.02□□□□□ -0.01
PHGDH-201ENST00000369407 CASC1Q6TDU7 716 aa15.02□□□□□ -0.01
PHGDH-201ENST00000369407 IFT57Q9NWB7 429 aa15.02□□□□□ -0.01
PHGDH-201ENST00000369407 PIK3R4Q99570 1358 aa15.02□□□□□ -0.01
PHGDH-201ENST00000369407 GADD45BO75293 160 aaPredicted RBP15.01□□□□□ -0.01
PHGDH-201ENST00000369407 CCDC39Q9UFE4 941 aa15.01□□□□□ -0.01
PHGDH-201ENST00000369407 RRS1Q15050 365 aaKnown RBP15.01□□□□□ -0.01
PHGDH-201ENST00000369407 CEP85Q6P2H3 762 aa15.01□□□□□ -0.01
PHGDH-201ENST00000369407 ZNF428Q96B54 188 aa15.01□□□□□ -0.01
PHGDH-201ENST00000369407 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.01□□□□□ -0.012e-6■■■■■ 31.1
PHGDH-201ENST00000369407 PUS7Q96PZ0 661 aaKnown RBP15.01□□□□□ -0.01
PHGDH-201ENST00000369407 PDIA4P13667 645 aaKnown RBP15□□□□□ -0.01
PHGDH-201ENST00000369407 TERF1P54274 439 aa15□□□□□ -0.01
PHGDH-201ENST00000369407 FAM135BQ49AJ0 1406 aa15□□□□□ -0.01
PHGDH-201ENST00000369407 RPGRIP1LQ68CZ1 1315 aa15□□□□□ -0.01
PHGDH-201ENST00000369407 PNPLA6Q8IY17 1366 aa15□□□□□ -0.01
PHGDH-201ENST00000369407 ANKRD44Q8N8A2 993 aa15□□□□□ -0.01
PHGDH-201ENST00000369407 PALD1Q9ULE6 856 aa15□□□□□ -0.01
PHGDH-201ENST00000369407 CAMSAP1Q5T5Y3 1602 aa15□□□□□ -0.01
PHGDH-201ENST00000369407 PPLO60437 1756 aa15□□□□□ -0.01
PHGDH-201ENST00000369407 CD163L1Q9NR16 1453 aa14.99□□□□□ -0.01
PHGDH-201ENST00000369407 ERC2O15083 957 aa14.99□□□□□ -0.01
PHGDH-201ENST00000369407 ZNF853P0CG23 659 aa14.99□□□□□ -0.01
PHGDH-201ENST00000369407 SLC4A10Q6U841 1118 aa14.99□□□□□ -0.01
PHGDH-201ENST00000369407 SASS6Q6UVJ0 657 aa14.99□□□□□ -0.01
PHGDH-201ENST00000369407 CFAP44Q96MT7 982 aa14.99□□□□□ -0.01
PHGDH-201ENST00000369407 UPF3BQ9BZI7 483 aaKnown RBP14.99□□□□□ -0.01
PHGDH-201ENST00000369407 WAPLQ7Z5K2 1190 aa14.99□□□□□ -0.01
PHGDH-201ENST00000369407 NME9Q86XW9 330 aa14.99□□□□□ -0.01
PHGDH-201ENST00000369407 PLCD3Q8N3E9 789 aa14.99□□□□□ -0.01
PHGDH-201ENST00000369407 VGLL3A8MV65 326 aa14.98□□□□□ -0.01
PHGDH-201ENST00000369407 REC8O95072 547 aa14.98□□□□□ -0.01
PHGDH-201ENST00000369407 CSPP1Q1MSJ5 1256 aa14.98□□□□□ -0.01
PHGDH-201ENST00000369407 TSPY26PQ9H489 355 aa14.98□□□□□ -0.01
PHGDH-201ENST00000369407 MIS18AQ9NYP9 233 aa14.98□□□□□ -0.01
PHGDH-201ENST00000369407 PLCB2Q00722 1185 aa14.98□□□□□ -0.01
PHGDH-201ENST00000369407 KNDC1Q76NI1 1749 aa14.98□□□□□ -0.01
PHGDH-201ENST00000369407 DYNC1I1O14576 645 aa14.97□□□□□ -0.01
PHGDH-201ENST00000369407 LARP6Q9BRS8 491 aaKnown RBP14.97□□□□□ -0.01
PHGDH-201ENST00000369407 TTC12Q9H892 705 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-201ENST00000369407 EXOC6BQ9Y2D4 811 aa14.97□□□□□ -0.01
PHGDH-201ENST00000369407 ARHGEF28Q8N1W1 1705 aaKnown RBP14.97□□□□□ -0.01
PHGDH-201ENST00000369407 F6X3S4 739 aa14.97□□□□□ -0.01
PHGDH-201ENST00000369407 USP25Q9UHP3 1055 aa14.97□□□□□ -0.01
PHGDH-201ENST00000369407 MSH6P52701 1360 aa14.97□□□□□ -0.01
PHGDH-201ENST00000369407 MCM10Q7L590 875 aa14.97□□□□□ -0.01
PHGDH-201ENST00000369407 MAP7D2Q96T17 732 aa14.97□□□□□ -0.01
PHGDH-201ENST00000369407 IL13P35225 146 aa14.96□□□□□ -0.01
PHGDH-201ENST00000369407 KIAA2012Q0VF49 1180 aa14.96□□□□□ -0.01
PHGDH-201ENST00000369407 AEBP1Q8IUX7 1158 aa14.96□□□□□ -0.01
PHGDH-201ENST00000369407 ARHGAP31Q2M1Z3 1444 aa14.96□□□□□ -0.01
PHGDH-201ENST00000369407 RILPL2Q969X0 211 aa14.96□□□□□ -0.01
PHGDH-201ENST00000369407 ANO2Q9NQ90 1003 aa14.96□□□□□ -0.01
PHGDH-201ENST00000369407 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
PHGDH-201ENST00000369407 ATP10DQ9P241 1426 aa14.95□□□□□ -0.02
PHGDH-201ENST00000369407 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.95□□□□□ -0.02
PHGDH-201ENST00000369407 BRD1O95696 1058 aa14.95□□□□□ -0.02
PHGDH-201ENST00000369407 MBD3O95983 291 aa14.95□□□□□ -0.02
PHGDH-201ENST00000369407 TRIM6-TRIM34B2RNG4 842 aa14.94□□□□□ -0.02
PHGDH-201ENST00000369407 PDE1AP54750 535 aa14.94□□□□□ -0.02
PHGDH-201ENST00000369407 USP48Q86UV5 1035 aa14.94□□□□□ -0.02
PHGDH-201ENST00000369407 RPAP2Q8IXW5 612 aaPredicted RBP14.94□□□□□ -0.02
PHGDH-201ENST00000369407 NAP1L2Q9ULW6 460 aaPredicted RBP14.94□□□□□ -0.02
PHGDH-201ENST00000369407 YTHDC2Q9H6S0 1430 aaKnown RBP14.94□□□□□ -0.02
PHGDH-201ENST00000369407 KIDINS220Q9ULH0 1771 aa14.94□□□□□ -0.02
PHGDH-201ENST00000369407 RTL1A6NKG5 1358 aa14.94□□□□□ -0.02
PHGDH-201ENST00000369407 RAPGEF3O95398 923 aa14.93□□□□□ -0.02
PHGDH-201ENST00000369407 MCM5P33992 734 aa14.93□□□□□ -0.02
PHGDH-201ENST00000369407 CBX1P83916 185 aa14.93□□□□□ -0.02
PHGDH-201ENST00000369407 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
PHGDH-201ENST00000369407 G2E3Q7L622 706 aa14.92□□□□□ -0.02
PHGDH-201ENST00000369407 UHRF1BP1LA0JNW5 1464 aa14.92□□□□□ -0.02
PHGDH-201ENST00000369407 SOX12O15370 315 aa14.92□□□□□ -0.02
PHGDH-201ENST00000369407 HCLS1P14317 486 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-201ENST00000369407 RIMS2Q9UQ26 1411 aa14.92□□□□□ -0.02
PHGDH-201ENST00000369407 ABCC3O15438 1527 aa14.92□□□□□ -0.02
PHGDH-201ENST00000369407 ZNF710Q8N1W2 664 aa14.91□□□□□ -0.02
PHGDH-201ENST00000369407 ABCA9Q8IUA7 1624 aa14.91□□□□□ -0.02
PHGDH-201ENST00000369407 IGSF3O75054 1194 aa14.91□□□□□ -0.02
PHGDH-201ENST00000369407 MAP4K4O95819 1239 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-201ENST00000369407 LMTK2Q8IWU2 1503 aa14.91□□□□□ -0.02
PHGDH-201ENST00000369407 ADCY5O95622 1261 aa14.91□□□□□ -0.02
PHGDH-201ENST00000369407 NECTIN2Q92692 538 aa14.91□□□□□ -0.02
PHGDH-201ENST00000369407 ARAP3Q8WWN8 1544 aa14.9□□□□□ -0.02
PHGDH-201ENST00000369407 NOLC1Q14978 699 aaKnown RBP eCLIP14.9□□□□□ -0.02
PHGDH-201ENST00000369407 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
PHGDH-201ENST00000369407 ESYT1Q9BSJ8 1104 aa14.9□□□□□ -0.02
PHGDH-201ENST00000369407 IL25Q9H293 177 aa14.9□□□□□ -0.02
PHGDH-201ENST00000369407 CNPY2Q9Y2B0 182 aa14.9□□□□□ -0.02
PHGDH-201ENST00000369407 SULT6B1Q6IMI4 303 aa14.9□□□□□ -0.02
PHGDH-201ENST00000369407 NEXMIFQ5QGS0 1516 aa14.9□□□□□ -0.02
PHGDH-201ENST00000369407 PTPRMP28827 1452 aa14.9□□□□□ -0.02
PHGDH-201ENST00000369407 MYRIPQ8NFW9 859 aa14.89□□□□□ -0.03
PHGDH-201ENST00000369407 ZFYVE9O95405 1425 aa14.89□□□□□ -0.03
PHGDH-201ENST00000369407 FBXO31Q5XUX0 539 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-201ENST00000369407 LMOD3Q0VAK6 560 aa14.89□□□□□ -0.03
PHGDH-201ENST00000369407 CCDC94Q9BW85 323 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms