RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 GOLGA6L10A6NI86 522 aa8.34□□□□□ -1.07
SPTA1-201ENST00000368147 EXOC5O00471 708 aa8.34□□□□□ -1.07
SPTA1-201ENST00000368147 CAVIN4Q5BKX8 364 aa8.34□□□□□ -1.07
SPTA1-201ENST00000368147 IPO9Q96P70 1041 aaKnown RBP8.34□□□□□ -1.07
SPTA1-201ENST00000368147 CWC27Q6UX04 472 aaKnown RBP8.34□□□□□ -1.07
SPTA1-201ENST00000368147 ZNF408Q9H9D4 720 aa8.34□□□□□ -1.07
SPTA1-201ENST00000368147 ANKRD50Q9ULJ7 1429 aa8.34□□□□□ -1.07
SPTA1-201ENST00000368147 PLS1Q14651 629 aa8.34□□□□□ -1.08
SPTA1-201ENST00000368147 NUDT16Q96DE0 195 aaKnown RBP8.34□□□□□ -1.08
SPTA1-201ENST00000368147 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.34□□□□□ -1.08
SPTA1-201ENST00000368147 BIN2Q9UBW5 565 aaPredicted RBP8.34□□□□□ -1.08
SPTA1-201ENST00000368147 PKNOX2Q96KN3 472 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 PPP6R1Q9UPN7 881 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 SUPT6HQ7KZ85 1726 aaKnown RBP8.33□□□□□ -1.08
SPTA1-201ENST00000368147 GNAT3A8MTJ3 354 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 FBXO31Q5XUX0 539 aaPredicted RBP8.33□□□□□ -1.08
SPTA1-201ENST00000368147 EIF3JO75822 258 aaKnown RBP8.33□□□□□ -1.08
SPTA1-201ENST00000368147 KRT28Q7Z3Y7 464 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 CCDC82Q8N4S0 544 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 PDE4AP27815 886 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 RABEP1Q15276 862 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 UBAC1Q9BSL1 405 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 VAT1LQ9HCJ6 419 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 IFT57Q9NWB7 429 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 TCP11L2Q8N4U5 519 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 CCDC112Q8NEF3 446 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 UBA5Q9GZZ9 404 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 IL1RAPL2Q9NP60 686 aa8.33□□□□□ -1.08
SPTA1-201ENST00000368147 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
SPTA1-201ENST00000368147 NUTM1Q86Y26 1132 aa8.32□□□□□ -1.08
SPTA1-201ENST00000368147 ST5P78524 1137 aa8.32□□□□□ -1.08
SPTA1-201ENST00000368147 AIDAQ96BJ3 306 aa8.32□□□□□ -1.08
SPTA1-201ENST00000368147 SEC63Q9UGP8 760 aaKnown RBP8.32□□□□□ -1.08
SPTA1-201ENST00000368147 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.32□□□□□ -1.08
SPTA1-201ENST00000368147 EPRSP07814 1512 aaKnown RBP8.32□□□□□ -1.08
SPTA1-201ENST00000368147 SETSIPP0DME0 302 aa8.32□□□□□ -1.08
SPTA1-201ENST00000368147 HMGB2P26583 209 aaKnown RBP8.32□□□□□ -1.08
SPTA1-201ENST00000368147 STAMBPO95630 424 aa8.32□□□□□ -1.08
SPTA1-201ENST00000368147 THUMPD2Q9BTF0 503 aaKnown RBP8.32□□□□□ -1.08
SPTA1-201ENST00000368147 SRGAP3O43295 1099 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 PRKRIP1Q9H875 184 aaPredicted RBP8.31□□□□□ -1.08
SPTA1-201ENST00000368147 GJA3Q9Y6H8 435 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 CCDC144CPQ8IYA2 1237 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 CDCA7LQ96GN5 454 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 CFTRP13569 1480 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 NCOA2Q15596 1464 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 GNAI3P08754 354 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 HSPA2P54652 639 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 SPC24Q8NBT2 197 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 AMOTL2Q9Y2J4 779 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 GOLGA6L10A0A0M3HER8 536 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 ZNF692Q9BU19 519 aaPredicted RBP8.31□□□□□ -1.08
SPTA1-201ENST00000368147 DDX23Q9BUQ8 820 aaKnown RBP8.31□□□□□ -1.08
SPTA1-201ENST00000368147 C9orf84Q5VXU9 1444 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 SHTN1A0MZ66 631 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 RNF214Q8ND24 703 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 LRRCC1Q9C099 1032 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 ZBTB3Q9H5J0 574 aa8.31□□□□□ -1.08
SPTA1-201ENST00000368147 HECW1Q76N89 1606 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 CLGNO14967 610 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 RANBP6O60518 1105 aaKnown RBP8.3□□□□□ -1.08
SPTA1-201ENST00000368147 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
SPTA1-201ENST00000368147 GBP2P32456 591 aaPredicted RBP8.3□□□□□ -1.08
SPTA1-201ENST00000368147 TRIM22Q8IYM9 498 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 CABLES1Q8TDN4 633 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 SETD1BQ9UPS6 1966 aaKnown RBP8.3□□□□□ -1.08
SPTA1-201ENST00000368147 ATP6V1AP38606 617 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 FAM177A1Q8N128 213 aaPredicted RBP8.3□□□□□ -1.08
SPTA1-201ENST00000368147 STK38Q15208 465 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 CEP63Q96MT8 703 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 C22orf23Q9BZE7 217 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 CEP126Q9P2H0 1117 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.3□□□□□ -1.08
SPTA1-201ENST00000368147 V9GYY5 206 aaPredicted RBP8.3□□□□□ -1.08
SPTA1-201ENST00000368147 RIMBP2O15034 1052 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 CDC45O75419 566 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 NEK4P51957 841 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 TNIP1Q15025 636 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 PPP4R3AQ6IN85 833 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 ZSCAN25Q6NSZ9 544 aa8.3□□□□□ -1.08
SPTA1-201ENST00000368147 CDK13Q14004 1512 aaKnown RBP8.3□□□□□ -1.08
SPTA1-201ENST00000368147 CCP110O43303 1012 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 MPNDQ8N594 471 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 CD109Q6YHK3 1445 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 DDX11Q96FC9 970 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 NFKBIBQ15653 356 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 ZNF444Q8N0Y2 327 aaPredicted RBP8.29□□□□□ -1.08
SPTA1-201ENST00000368147 TFCP2L1Q9NZI6 479 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 NCKAP5LQ9HCH0 1330 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 PICALMQ13492 652 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 SRCIN1Q9C0H9 1055 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 NAT10Q9H0A0 1025 aaKnown RBP8.29□□□□□ -1.08
SPTA1-201ENST00000368147 SAMM50Q9Y512 469 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 FGD6Q6ZV73 1430 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 PPP2R1AP30153 589 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 MAP3K9P80192 1104 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 VEZTQ9HBM0 779 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 KIF7Q2M1P5 1343 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
SPTA1-201ENST00000368147 ATP5J2-PTCD1G3V325 749 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms