RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 RREB1Q92766 1687 aa32.62■■■□□ 2.81
PFDN2-201ENST00000368010 NCAPD2Q15021 1401 aa32.61■■■□□ 2.81
PFDN2-201ENST00000368010 RGPD3A6NKT7 1758 aaPredicted RBP32.6■■■□□ 2.81
PFDN2-201ENST00000368010 RGPD4Q7Z3J3 1758 aa32.6■■■□□ 2.81
PFDN2-201ENST00000368010 KCNQ2O43526 872 aa32.6■■■□□ 2.81
PFDN2-201ENST00000368010 EIF4A2Q14240 407 aaKnown RBP32.6■■■□□ 2.81
PFDN2-201ENST00000368010 EYA1Q99502 592 aa32.59■■■□□ 2.81
PFDN2-201ENST00000368010 SHANK3Q9BYB0 1731 aa32.58■■■□□ 2.81
PFDN2-201ENST00000368010 CC2D1BQ5T0F9 858 aaKnown RBP32.57■■■□□ 2.8
PFDN2-201ENST00000368010 NUP188Q5SRE5 1749 aa32.56■■■□□ 2.8
PFDN2-201ENST00000368010 PSDA5PKW4 1024 aaPredicted RBP32.55■■■□□ 2.8
PFDN2-201ENST00000368010 NPC1L1Q9UHC9 1359 aa32.55■■■□□ 2.8
PFDN2-201ENST00000368010 PCDH11XQ9BZA7 1347 aa32.53■■■□□ 2.8
PFDN2-201ENST00000368010 PCDH11YQ9BZA8 1340 aa32.53■■■□□ 2.8
PFDN2-201ENST00000368010 R3HDM1Q15032 1099 aaKnown RBP32.52■■■□□ 2.8
PFDN2-201ENST00000368010 NBPF14Q5TI25 921 aa32.52■■■□□ 2.8
PFDN2-201ENST00000368010 IGSF1Q8N6C5 1336 aa32.51■■■□□ 2.79
PFDN2-201ENST00000368010 SYTL4Q96C24 671 aaPredicted RBP32.48■■■□□ 2.79
PFDN2-201ENST00000368010 PKD1L3Q7Z443 1732 aa32.48■■■□□ 2.79
PFDN2-201ENST00000368010 DOT1LQ8TEK3 1739 aa32.48■■■□□ 2.79
PFDN2-201ENST00000368010 BTAF1O14981 1849 aa32.47■■■□□ 2.79
PFDN2-201ENST00000368010 CNGB1Q14028 1251 aaPredicted RBP32.47■■■□□ 2.79
PFDN2-201ENST00000368010 TXNRD1Q16881 649 aa32.47■■■□□ 2.79
PFDN2-201ENST00000368010 SPG7Q9UQ90 795 aa32.47■■■□□ 2.79
PFDN2-201ENST00000368010 PRIM1P49642 420 aaKnown RBP32.46■■■□□ 2.79
PFDN2-201ENST00000368010 MTHFSP49914 203 aa32.46■■■□□ 2.79
PFDN2-201ENST00000368010 PROM2Q8N271 834 aa32.46■■■□□ 2.79
PFDN2-201ENST00000368010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.45■■■□□ 2.79
PFDN2-201ENST00000368010 PLEKHG2Q9H7P9 1386 aa32.45■■■□□ 2.78
PFDN2-201ENST00000368010 CYP27B1O15528 508 aa32.44■■■□□ 2.78
PFDN2-201ENST00000368010 KAT6BQ8WYB5 2073 aa32.42■■■□□ 2.78
PFDN2-201ENST00000368010 IL13P35225 146 aa32.4■■■□□ 2.78
PFDN2-201ENST00000368010 ANO8Q9HCE9 1232 aaPredicted RBP32.37■■■□□ 2.77
PFDN2-201ENST00000368010 NKX1-1Q15270 411 aaPredicted RBP32.35■■■□□ 2.77
PFDN2-201ENST00000368010 AEBP1Q8IUX7 1158 aa32.35■■■□□ 2.77
PFDN2-201ENST00000368010 IFNL2Q8IZJ0 200 aa32.35■■■□□ 2.77
PFDN2-201ENST00000368010 SULT6B1Q6IMI4 303 aa32.34■■■□□ 2.77
PFDN2-201ENST00000368010 KDRP35968 1356 aa32.33■■■□□ 2.77
PFDN2-201ENST00000368010 PHKG2P15735 406 aa32.33■■■□□ 2.77
PFDN2-201ENST00000368010 STK32BQ9NY57 414 aa32.33■■■□□ 2.77
PFDN2-201ENST00000368010 DIAPH1O60610 1272 aaKnown RBP32.32■■■□□ 2.76
PFDN2-201ENST00000368010 PLEKHO1Q53GL0 409 aaPredicted RBP32.32■■■□□ 2.76
PFDN2-201ENST00000368010 LRP5O75197 1615 aa32.32■■■□□ 2.76
PFDN2-201ENST00000368010 AMOTQ4VCS5 1084 aa32.31■■■□□ 2.76
PFDN2-201ENST00000368010 SLC27A3Q5K4L6 730 aa32.31■■■□□ 2.76
PFDN2-201ENST00000368010 TOGARAM1Q9Y4F4 1720 aa32.31■■■□□ 2.76
PFDN2-201ENST00000368010 MPRIPQ6WCQ1 1025 aa32.3■■■□□ 2.76
PFDN2-201ENST00000368010 LRRC4BQ9NT99 713 aa32.28■■■□□ 2.76
PFDN2-201ENST00000368010 PAPPAQ13219 1627 aa32.27■■■□□ 2.76
PFDN2-201ENST00000368010 SLC15A2Q16348 729 aa32.27■■■□□ 2.76
PFDN2-201ENST00000368010 COL3A1P02461 1466 aaPredicted RBP32.27■■■□□ 2.76
PFDN2-201ENST00000368010 HSP90AB1P08238 724 aaKnown RBP32.25■■■□□ 2.75
PFDN2-201ENST00000368010 ZNF530Q6P9A1 599 aaPredicted RBP32.25■■■□□ 2.75
PFDN2-201ENST00000368010 LY75O60449 1722 aa32.25■■■□□ 2.75
PFDN2-201ENST00000368010 ZEB1P37275 1124 aaPredicted RBP32.24■■■□□ 2.75
PFDN2-201ENST00000368010 HMOX1P09601 288 aa32.23■■■□□ 2.75
PFDN2-201ENST00000368010 CFAP53Q96M91 514 aa32.23■■■□□ 2.75
PFDN2-201ENST00000368010 CCNL1Q9UK58 526 aaPredicted RBP32.23■■■□□ 2.75
PFDN2-201ENST00000368010 ITGB4P16144 1822 aa32.22■■■□□ 2.75
PFDN2-201ENST00000368010 TMOD3Q9NYL9 352 aa32.22■■■□□ 2.75
PFDN2-201ENST00000368010 PALLDQ8WX93 1383 aa32.21■■■□□ 2.75
PFDN2-201ENST00000368010 SRCAPQ6ZRS2 3230 aa32.21■■■□□ 2.75
PFDN2-201ENST00000368010 PPP2R1AP30153 589 aa32.21■■■□□ 2.75
PFDN2-201ENST00000368010 C1orf141Q5JVX7 400 aa32.21■■■□□ 2.75
PFDN2-201ENST00000368010 PIGBQ92521 554 aa32.21■■■□□ 2.75
PFDN2-201ENST00000368010 SMARCC1Q92922 1105 aaPredicted RBP32.2■■■□□ 2.75
PFDN2-201ENST00000368010 DCAF5Q96JK2 942 aa32.2■■■□□ 2.75
PFDN2-201ENST00000368010 U2SURPO15042 1029 aaKnown RBP32.19■■■□□ 2.74
PFDN2-201ENST00000368010 KCNQ4P56696 695 aa32.19■■■□□ 2.74
PFDN2-201ENST00000368010 CASZ1Q86V15 1759 aa32.18■■■□□ 2.74
PFDN2-201ENST00000368010 ZNF827Q17R98 1081 aa32.18■■■□□ 2.74
PFDN2-201ENST00000368010 AKT1S1Q96B36 256 aa32.16■■■□□ 2.74
PFDN2-201ENST00000368010 SPON1Q9HCB6 807 aa32.16■■■□□ 2.74
PFDN2-201ENST00000368010 ERVV-2B6SEH9 535 aa32.15■■■□□ 2.74
PFDN2-201ENST00000368010 PDGFDQ9GZP0 370 aaPredicted RBP32.15■■■□□ 2.74
PFDN2-201ENST00000368010 KDM6AO15550 1401 aaPredicted RBP32.15■■■□□ 2.74
PFDN2-201ENST00000368010 HMGB2P26583 209 aaKnown RBP32.12■■■□□ 2.73
PFDN2-201ENST00000368010 DDX10Q13206 875 aaKnown RBP32.12■■■□□ 2.73
PFDN2-201ENST00000368010 AKAP4Q5JQC9 854 aa32.11■■■□□ 2.73
PFDN2-201ENST00000368010 NUDCQ9Y266 331 aa32.11■■■□□ 2.73
PFDN2-201ENST00000368010 CABP4P57796 275 aa32.1■■■□□ 2.73
PFDN2-201ENST00000368010 ZBTB7AO95365 584 aa32.09■■■□□ 2.73
PFDN2-201ENST00000368010 ASAP1Q9ULH1 1129 aa32.09■■■□□ 2.73
PFDN2-201ENST00000368010 TFCP2L1Q9NZI6 479 aa32.08■■■□□ 2.73
PFDN2-201ENST00000368010 MTHFSDQ2M296 383 aaKnown RBP32.07■■■□□ 2.72
PFDN2-201ENST00000368010 ATG3Q9NT62 314 aa32.07■■■□□ 2.72
PFDN2-201ENST00000368010 C5P01031 1676 aa32.07■■■□□ 2.72
PFDN2-201ENST00000368010 LOC102724428A0A0B4J2F2 783 aa32.05■■■□□ 2.72
PFDN2-201ENST00000368010 SIK1P57059 783 aa32.05■■■□□ 2.72
PFDN2-201ENST00000368010 MTFR1LQ9H019 292 aa32.05■■■□□ 2.72
PFDN2-201ENST00000368010 PNPLA7Q6ZV29 1317 aa32.04■■■□□ 2.72
PFDN2-201ENST00000368010 QSER1Q2KHR3 1735 aa32.04■■■□□ 2.72
PFDN2-201ENST00000368010 PPP1R1BQ9UD71 204 aaPredicted RBP32.03■■■□□ 2.72
PFDN2-201ENST00000368010 U2AF1L5P0DN76 240 aaPredicted RBP32.02■■■□□ 2.72
PFDN2-201ENST00000368010 U2AF1Q01081 240 aaKnown RBP eCLIP32.02■■■□□ 2.72
PFDN2-201ENST00000368010 ATF5Q9Y2D1 282 aaPredicted RBP32.02■■■□□ 2.72
PFDN2-201ENST00000368010 SCN11AQ9UI33 1791 aa32.01■■■□□ 2.71
PFDN2-201ENST00000368010 PRKAR2BP31323 418 aa32■■■□□ 2.71
PFDN2-201ENST00000368010 RALBP1Q15311 655 aa32■■■□□ 2.71
PFDN2-201ENST00000368010 NFATC2IPQ8NCF5 419 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms