RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ZSCAN31Q96LW9 406 aaPredicted RBP18.46■□□□□ 0.55
NUCKS1-201ENST00000367142 CETN2P41208 172 aa18.46■□□□□ 0.55
NUCKS1-201ENST00000367142 PDRG1Q9NUG6 133 aa18.46■□□□□ 0.55
NUCKS1-201ENST00000367142 IMMTQ16891 758 aaKnown RBP18.46■□□□□ 0.55
NUCKS1-201ENST00000367142 CAVIN4Q5BKX8 364 aa18.46■□□□□ 0.55
NUCKS1-201ENST00000367142 LARP1BQ659C4 914 aaKnown RBP18.46■□□□□ 0.55
NUCKS1-201ENST00000367142 PAXIP1Q6ZW49 1069 aaPredicted RBP18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 CCDC112Q8NEF3 446 aa18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 TRAK2O60296 914 aa18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 ERLIN1O75477 346 aa18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 TAX1BP1Q86VP1 789 aa18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 TAF4BQ92750 862 aa18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 IDH1O75874 414 aaKnown RBP18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 POLR3DP05423 398 aaPredicted RBP18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 TMEM87AQ8NBN3 555 aa18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 SLC52A1Q9NWF4 448 aa18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 SRGAP3O43295 1099 aa18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 TTLL12Q14166 644 aaPredicted RBP18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 ZNF428Q96B54 188 aa18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 SPINK5Q9NQ38 1064 aaPredicted RBP18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 PLEKHH2Q8IVE3 1493 aa18.45■□□□□ 0.54
NUCKS1-201ENST00000367142 AKAP2Q9Y2D5 859 aa18.44■□□□□ 0.54
NUCKS1-201ENST00000367142 SPC24Q8NBT2 197 aa18.44■□□□□ 0.54
NUCKS1-201ENST00000367142 TSR2Q969E8 191 aaKnown RBP18.44■□□□□ 0.54
NUCKS1-201ENST00000367142 CFAP45Q9UL16 551 aa18.44■□□□□ 0.54
NUCKS1-201ENST00000367142 PDE3AQ14432 1141 aa18.44■□□□□ 0.54
NUCKS1-201ENST00000367142 SPDYE4A6NLX3 237 aa18.44■□□□□ 0.54
NUCKS1-201ENST00000367142 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
NUCKS1-201ENST00000367142 KCNH5Q8NCM2 988 aa18.43■□□□□ 0.54
NUCKS1-201ENST00000367142 METTL24Q5JXM2 366 aa18.43■□□□□ 0.54
NUCKS1-201ENST00000367142 TMOD3Q9NYL9 352 aa18.43■□□□□ 0.54
NUCKS1-201ENST00000367142 HFM1A2PYH4 1435 aa18.43■□□□□ 0.54
NUCKS1-201ENST00000367142 KIAA0754O94854 1291 aa18.43■□□□□ 0.54
NUCKS1-201ENST00000367142 CHMP4BP1P59074 171 aa18.43■□□□□ 0.54
NUCKS1-201ENST00000367142 PIBF1Q8WXW3 757 aa18.43■□□□□ 0.54
NUCKS1-201ENST00000367142 SPATA32Q96LK8 384 aa18.43■□□□□ 0.54
NUCKS1-201ENST00000367142 PLCD4Q9BRC7 762 aa18.43■□□□□ 0.54
NUCKS1-201ENST00000367142 ABCF2Q9UG63 623 aa18.42■□□□□ 0.54
NUCKS1-201ENST00000367142 EIF5P55010 431 aaKnown RBP18.42■□□□□ 0.54
NUCKS1-201ENST00000367142 EHMT1Q9H9B1 1298 aa18.42■□□□□ 0.54
NUCKS1-201ENST00000367142 SMARCA4P51532 1647 aa18.42■□□□□ 0.54
NUCKS1-201ENST00000367142 NFKBIBQ15653 356 aa18.42■□□□□ 0.54
NUCKS1-201ENST00000367142 ZNF397Q8NF99 534 aaPredicted RBP18.42■□□□□ 0.54
NUCKS1-201ENST00000367142 CUL5Q93034 780 aa18.42■□□□□ 0.54
NUCKS1-201ENST00000367142 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
NUCKS1-201ENST00000367142 IFIT1P09914 478 aaKnown RBP18.41■□□□□ 0.54
NUCKS1-201ENST00000367142 CENPHQ9H3R5 247 aa18.41■□□□□ 0.54
NUCKS1-201ENST00000367142 ANKIB1Q9P2G1 1089 aa18.41■□□□□ 0.54
NUCKS1-201ENST00000367142 AQRO60306 1485 aaKnown RBP eCLIP18.41■□□□□ 0.546e-20■■■□□ 18.3
NUCKS1-201ENST00000367142 CCDC66A2RUB6 948 aa18.41■□□□□ 0.54
NUCKS1-201ENST00000367142 SMTNL1A8MU46 457 aa18.41■□□□□ 0.54
NUCKS1-201ENST00000367142 JAKMIP1Q96N16 626 aaKnown RBP18.41■□□□□ 0.54
NUCKS1-201ENST00000367142 EIF3JO75822 258 aaKnown RBP18.41■□□□□ 0.54
NUCKS1-201ENST00000367142 WDR63Q8IWG1 891 aa18.41■□□□□ 0.54
NUCKS1-201ENST00000367142 MKNK2Q9HBH9 465 aa18.41■□□□□ 0.54
NUCKS1-201ENST00000367142 HMGN5P82970 282 aaKnown RBP18.4■□□□□ 0.54
NUCKS1-201ENST00000367142 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
NUCKS1-201ENST00000367142 ANAPC15P60006 121 aa18.4■□□□□ 0.54
NUCKS1-201ENST00000367142 TSG101Q99816 390 aa18.4■□□□□ 0.54
NUCKS1-201ENST00000367142 ATAD2Q6PL18 1390 aa18.4■□□□□ 0.54
NUCKS1-201ENST00000367142 CCDC150Q8NCX0 1101 aa18.4■□□□□ 0.54
NUCKS1-201ENST00000367142 NCOA2Q15596 1464 aa18.39■□□□□ 0.54
NUCKS1-201ENST00000367142 GNAT3A8MTJ3 354 aa18.39■□□□□ 0.54
NUCKS1-201ENST00000367142 SLF2Q8IX21 1173 aa18.39■□□□□ 0.54
NUCKS1-201ENST00000367142 RPGRIP1LQ68CZ1 1315 aa18.39■□□□□ 0.53
NUCKS1-201ENST00000367142 KIAA1328Q86T90 577 aa18.39■□□□□ 0.53
NUCKS1-201ENST00000367142 CCDC85AQ96PX6 553 aaPredicted RBP18.39■□□□□ 0.53
NUCKS1-201ENST00000367142 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.53
NUCKS1-201ENST00000367142 DZIP1Q86YF9 867 aaKnown RBP18.39■□□□□ 0.53
NUCKS1-201ENST00000367142 PDIA4P13667 645 aaKnown RBP18.39■□□□□ 0.53
NUCKS1-201ENST00000367142 XPCQ01831 940 aaPredicted RBP18.39■□□□□ 0.53
NUCKS1-201ENST00000367142 IGF1RP08069 1367 aa18.39■□□□□ 0.53
NUCKS1-201ENST00000367142 SLC26A8Q96RN1 970 aa18.38■□□□□ 0.53
NUCKS1-201ENST00000367142 CCDC91Q7Z6B0 441 aa18.38■□□□□ 0.53
NUCKS1-201ENST00000367142 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
NUCKS1-201ENST00000367142 RPGRQ92834 1020 aaKnown RBP18.38■□□□□ 0.53
NUCKS1-201ENST00000367142 K7ELQ4 463 aaPredicted RBP18.38■□□□□ 0.53
NUCKS1-201ENST00000367142 SLC12A5Q9H2X9 1139 aa18.38■□□□□ 0.53
NUCKS1-201ENST00000367142 WDR78Q5VTH9 848 aa18.37■□□□□ 0.53
NUCKS1-201ENST00000367142 EPB41L2O43491 1005 aaKnown RBP18.37■□□□□ 0.53
NUCKS1-201ENST00000367142 BCAR3O75815 825 aa18.37■□□□□ 0.53
NUCKS1-201ENST00000367142 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
NUCKS1-201ENST00000367142 GRIN2BQ13224 1484 aa18.37■□□□□ 0.53
NUCKS1-201ENST00000367142 CCDC96Q2M329 555 aa18.36■□□□□ 0.53
NUCKS1-201ENST00000367142 ANKRD30BQ9BXX2 1392 aa18.36■□□□□ 0.53
NUCKS1-201ENST00000367142 ATF7IPQ6VMQ6 1270 aa18.36■□□□□ 0.53
NUCKS1-201ENST00000367142 LRRFIP2Q9Y608 721 aaKnown RBP18.36■□□□□ 0.53
NUCKS1-201ENST00000367142 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
NUCKS1-201ENST00000367142 RRS1Q15050 365 aaKnown RBP18.36■□□□□ 0.53
NUCKS1-201ENST00000367142 HSP90AB3PQ58FF7 597 aa18.35■□□□□ 0.53
NUCKS1-201ENST00000367142 PHAXQ9H814 394 aaKnown RBP18.35■□□□□ 0.53
NUCKS1-201ENST00000367142 FAM177A1Q8N128 213 aaPredicted RBP18.35■□□□□ 0.53
NUCKS1-201ENST00000367142 RAB34Q9BZG1 259 aa18.35■□□□□ 0.53
NUCKS1-201ENST00000367142 NUP62CLQ9H1M0 184 aa18.35■□□□□ 0.53
NUCKS1-201ENST00000367142 CHD1LQ86WJ1 897 aa18.35■□□□□ 0.53
NUCKS1-201ENST00000367142 CCDC148Q8NFR7 591 aa18.35■□□□□ 0.53
NUCKS1-201ENST00000367142 CASKIN1Q8WXD9 1431 aa18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 TMEM266Q2M3C6 531 aa18.34■□□□□ 0.53
NUCKS1-201ENST00000367142 FKBP15Q5T1M5 1219 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms