RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 ATF5Q9Y2D1 282 aaPredicted RBP17.38■□□□□ 0.37
MRPL55-209ENST00000366735 PTGER2P43116 358 aa17.37■□□□□ 0.37
MRPL55-209ENST00000366735 AMPHP49418 695 aa17.37■□□□□ 0.37
MRPL55-209ENST00000366735 PDGFDQ9GZP0 370 aaPredicted RBP17.37■□□□□ 0.37
MRPL55-209ENST00000366735 ST20-MTHFSA0A0A6YYL1 179 aa17.36■□□□□ 0.37
MRPL55-209ENST00000366735 SLC27A3Q5K4L6 730 aa17.36■□□□□ 0.37
MRPL55-209ENST00000366735 LTV1Q96GA3 475 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-209ENST00000366735 MSH5O43196 834 aa17.35■□□□□ 0.37
MRPL55-209ENST00000366735 DDX54Q8TDD1 881 aaKnown RBP17.35■□□□□ 0.37
MRPL55-209ENST00000366735 TESK2Q96S53 571 aa17.35■□□□□ 0.37
MRPL55-209ENST00000366735 MAP3K19Q56UN5 1328 aa17.35■□□□□ 0.37
MRPL55-209ENST00000366735 HOXC9P31274 260 aa17.34■□□□□ 0.37
MRPL55-209ENST00000366735 TMF1P82094 1093 aa17.34■□□□□ 0.37
MRPL55-209ENST00000366735 MAP3K5Q99683 1374 aa17.34■□□□□ 0.37
MRPL55-209ENST00000366735 FHDC1Q9C0D6 1143 aaPredicted RBP17.34■□□□□ 0.37
MRPL55-209ENST00000366735 C5P01031 1676 aa17.33■□□□□ 0.37
MRPL55-209ENST00000366735 CGNL1Q0VF96 1302 aa17.33■□□□□ 0.36
MRPL55-209ENST00000366735 USP47Q96K76 1375 aa17.32■□□□□ 0.36
MRPL55-209ENST00000366735 ZEB1P37275 1124 aaPredicted RBP17.32■□□□□ 0.36
MRPL55-209ENST00000366735 CDCA8Q53HL2 280 aa17.32■□□□□ 0.36
MRPL55-209ENST00000366735 SLC16A10Q8TF71 515 aa17.32■□□□□ 0.36
MRPL55-209ENST00000366735 SYTL4Q96C24 671 aaPredicted RBP17.32■□□□□ 0.36
MRPL55-209ENST00000366735 ARXQ96QS3 562 aa17.32■□□□□ 0.36
MRPL55-209ENST00000366735 SYT17Q9BSW7 474 aa17.32■□□□□ 0.36
MRPL55-209ENST00000366735 MEGF6O75095 1541 aa17.31■□□□□ 0.36
MRPL55-209ENST00000366735 TAF1LQ8IZX4 1826 aa17.31■□□□□ 0.36
MRPL55-209ENST00000366735 HMGB2P26583 209 aaKnown RBP17.31■□□□□ 0.36
MRPL55-209ENST00000366735 POLD1P28340 1107 aa17.31■□□□□ 0.36
MRPL55-209ENST00000366735 SGIP1Q9BQI5 828 aa17.31■□□□□ 0.36
MRPL55-209ENST00000366735 ITGB4P16144 1822 aa17.31■□□□□ 0.36
MRPL55-209ENST00000366735 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
MRPL55-209ENST00000366735 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
MRPL55-209ENST00000366735 ZCRB1Q8TBF4 217 aaKnown RBP17.3■□□□□ 0.36
MRPL55-209ENST00000366735 CCER1Q8TC90 406 aaPredicted RBP17.3■□□□□ 0.36
MRPL55-209ENST00000366735 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
MRPL55-209ENST00000366735 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
MRPL55-209ENST00000366735 RAPGEF4Q8WZA2 1011 aa17.29■□□□□ 0.36
MRPL55-209ENST00000366735 LRRC4BQ9NT99 713 aa17.29■□□□□ 0.36
MRPL55-209ENST00000366735 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
MRPL55-209ENST00000366735 AKT1S1Q96B36 256 aa17.28■□□□□ 0.36
MRPL55-209ENST00000366735 TFCP2L1Q9NZI6 479 aa17.28■□□□□ 0.36
MRPL55-209ENST00000366735 FLT4P35916 1363 aa17.28■□□□□ 0.36
MRPL55-209ENST00000366735 PCDH11XQ9BZA7 1347 aa17.26■□□□□ 0.35
MRPL55-209ENST00000366735 PCDH11YQ9BZA8 1340 aa17.26■□□□□ 0.35
MRPL55-209ENST00000366735 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
MRPL55-209ENST00000366735 PRIM1P49642 420 aaKnown RBP17.26■□□□□ 0.35
MRPL55-209ENST00000366735 NSD2O96028 1365 aa17.26■□□□□ 0.35
MRPL55-209ENST00000366735 INSRP06213 1382 aa17.26■□□□□ 0.35
MRPL55-209ENST00000366735 TATP17735 454 aaPredicted RBP17.25■□□□□ 0.35
MRPL55-209ENST00000366735 RRS1Q15050 365 aaKnown RBP17.25■□□□□ 0.35
MRPL55-209ENST00000366735 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
MRPL55-209ENST00000366735 PNPLA7Q6ZV29 1317 aa17.24■□□□□ 0.35
MRPL55-209ENST00000366735 FYB1O15117 783 aa17.24■□□□□ 0.35
MRPL55-209ENST00000366735 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
MRPL55-209ENST00000366735 CCNL1Q9UK58 526 aaPredicted RBP17.24■□□□□ 0.35
MRPL55-209ENST00000366735 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
MRPL55-209ENST00000366735 CLSPNQ9HAW4 1339 aa17.23■□□□□ 0.35
MRPL55-209ENST00000366735 UTRNP46939 3433 aa17.23■□□□□ 0.35
MRPL55-209ENST00000366735 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-209ENST00000366735 GPR162Q16538 588 aa17.22■□□□□ 0.35
MRPL55-209ENST00000366735 FBLN1P23142 703 aa17.21■□□□□ 0.35
MRPL55-209ENST00000366735 NBPF6Q5VWK0 638 aa17.21■□□□□ 0.35
MRPL55-209ENST00000366735 ZNF784Q8NCA9 323 aaPredicted RBP17.21■□□□□ 0.35
MRPL55-209ENST00000366735 NBPF4Q96M43 638 aa17.21■□□□□ 0.35
MRPL55-209ENST00000366735 C4BP0C0L5 1744 aa17.21■□□□□ 0.35
MRPL55-209ENST00000366735 NSD3Q9BZ95 1437 aa17.21■□□□□ 0.34
MRPL55-209ENST00000366735 USHBP1Q8N6Y0 703 aa17.2■□□□□ 0.34
MRPL55-209ENST00000366735 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
MRPL55-209ENST00000366735 FLAD1Q8NFF5 587 aa17.18■□□□□ 0.34
MRPL55-209ENST00000366735 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
MRPL55-209ENST00000366735 KCNQ4P56696 695 aa17.17■□□□□ 0.34
MRPL55-209ENST00000366735 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
MRPL55-209ENST00000366735 TIMELESSQ9UNS1 1208 aa17.17■□□□□ 0.34
MRPL55-209ENST00000366735 NCAPD2Q15021 1401 aa17.16■□□□□ 0.34
MRPL55-209ENST00000366735 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
MRPL55-209ENST00000366735 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
MRPL55-209ENST00000366735 SPG7Q9UQ90 795 aa17.14■□□□□ 0.33
MRPL55-209ENST00000366735 MPRIPQ6WCQ1 1025 aa17.13■□□□□ 0.33
MRPL55-209ENST00000366735 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
MRPL55-209ENST00000366735 PPM1GO15355 546 aaPredicted RBP17.12■□□□□ 0.33
MRPL55-209ENST00000366735 GRIN3BO60391 1043 aa17.12■□□□□ 0.33
MRPL55-209ENST00000366735 COL23A1Q86Y22 540 aaPredicted RBP17.12■□□□□ 0.33
MRPL55-209ENST00000366735 AK7Q96M32 723 aa17.12■□□□□ 0.33
MRPL55-209ENST00000366735 EMILIN1Q9Y6C2 1016 aa17.12■□□□□ 0.33
MRPL55-209ENST00000366735 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
MRPL55-209ENST00000366735 CYP27B1O15528 508 aa17.1■□□□□ 0.33
MRPL55-209ENST00000366735 GOLGB1Q14789 3259 aaKnown RBP17.09■□□□□ 0.33
MRPL55-209ENST00000366735 NLGN2Q8NFZ4 835 aa17.09■□□□□ 0.33
MRPL55-209ENST00000366735 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
MRPL55-209ENST00000366735 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.33
MRPL55-209ENST00000366735 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
MRPL55-209ENST00000366735 GIGYF1O75420 1035 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-209ENST00000366735 MSL1Q68DK7 614 aa17.08■□□□□ 0.32
MRPL55-209ENST00000366735 CD2APQ9Y5K6 639 aa17.08■□□□□ 0.32
MRPL55-209ENST00000366735 C1QTNF8P60827 252 aa17.07■□□□□ 0.32
MRPL55-209ENST00000366735 NKX1-1Q15270 411 aaPredicted RBP17.07■□□□□ 0.32
MRPL55-209ENST00000366735 TMOD3Q9NYL9 352 aa17.07■□□□□ 0.32
MRPL55-209ENST00000366735 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
MRPL55-209ENST00000366735 SENP3-EIF4A1A0A087X0R7 540 aa17.06■□□□□ 0.32
MRPL55-209ENST00000366735 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms