RNA–Protein interactions for RNA: ENST00000364553.1

RN7SKP246-201, Transcript of RNA, 7SK small nuclear pseudogene 246, humanhuman

BASIC

Gene RN7SKP246, Length 317 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP246-201ENST00000364553 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
RN7SKP246-201ENST00000364553 PPP2R1AP30153 589 aa12.91□□□□□ -0.34
RN7SKP246-201ENST00000364553 EN1Q05925 392 aaPredicted RBP12.91□□□□□ -0.34
RN7SKP246-201ENST00000364553 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
RN7SKP246-201ENST00000364553 SULT6B1Q6IMI4 303 aa12.91□□□□□ -0.34
RN7SKP246-201ENST00000364553 KAT6BQ8WYB5 2073 aa12.91□□□□□ -0.34
RN7SKP246-201ENST00000364553 IGSF1Q8N6C5 1336 aa12.9□□□□□ -0.34
RN7SKP246-201ENST00000364553 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
RN7SKP246-201ENST00000364553 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
RN7SKP246-201ENST00000364553 RGPD2P0DJD1 1756 aa12.9□□□□□ -0.34
RN7SKP246-201ENST00000364553 U2SURPO15042 1029 aaKnown RBP12.89□□□□□ -0.35
RN7SKP246-201ENST00000364553 PLSCR1O15162 318 aa12.89□□□□□ -0.35
RN7SKP246-201ENST00000364553 IFNL2Q8IZJ0 200 aa12.89□□□□□ -0.35
RN7SKP246-201ENST00000364553 SYTL4Q96C24 671 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP246-201ENST00000364553 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
RN7SKP246-201ENST00000364553 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
RN7SKP246-201ENST00000364553 WNK3Q9BYP7 1800 aa12.88□□□□□ -0.35
RN7SKP246-201ENST00000364553 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
RN7SKP246-201ENST00000364553 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
RN7SKP246-201ENST00000364553 PLEKHG2Q9H7P9 1386 aa12.87□□□□□ -0.35
RN7SKP246-201ENST00000364553 KCNQ2O43526 872 aa12.87□□□□□ -0.35
RN7SKP246-201ENST00000364553 PRIM1P49642 420 aaKnown RBP12.87□□□□□ -0.35
RN7SKP246-201ENST00000364553 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
RN7SKP246-201ENST00000364553 NBPF14Q5TI25 921 aa12.87□□□□□ -0.35
RN7SKP246-201ENST00000364553 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
RN7SKP246-201ENST00000364553 MEGF6O75095 1541 aa12.87□□□□□ -0.35
RN7SKP246-201ENST00000364553 PARD3Q8TEW0 1356 aa12.86□□□□□ -0.35
RN7SKP246-201ENST00000364553 RGPD1P0DJD0 1748 aa12.86□□□□□ -0.35
RN7SKP246-201ENST00000364553 CYP27B1O15528 508 aa12.86□□□□□ -0.35
RN7SKP246-201ENST00000364553 HMOX1P09601 288 aa12.86□□□□□ -0.35
RN7SKP246-201ENST00000364553 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP246-201ENST00000364553 C1orf141Q5JVX7 400 aa12.86□□□□□ -0.35
RN7SKP246-201ENST00000364553 NCAPD2Q15021 1401 aa12.86□□□□□ -0.35
RN7SKP246-201ENST00000364553 EP400Q96L91 3159 aa12.85□□□□□ -0.35
RN7SKP246-201ENST00000364553 NEFMP07197 916 aa12.85□□□□□ -0.35
RN7SKP246-201ENST00000364553 AEBP1Q8IUX7 1158 aa12.85□□□□□ -0.35
RN7SKP246-201ENST00000364553 PNNQ9H307 717 aaKnown RBP12.85□□□□□ -0.35
RN7SKP246-201ENST00000364553 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
RN7SKP246-201ENST00000364553 PHKG2P15735 406 aa12.84□□□□□ -0.35
RN7SKP246-201ENST00000364553 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
RN7SKP246-201ENST00000364553 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
RN7SKP246-201ENST00000364553 FCHSD2O94868 740 aa12.83□□□□□ -0.36
RN7SKP246-201ENST00000364553 MPRIPQ6WCQ1 1025 aa12.83□□□□□ -0.36
RN7SKP246-201ENST00000364553 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
RN7SKP246-201ENST00000364553 DCAF5Q96JK2 942 aa12.83□□□□□ -0.36
RN7SKP246-201ENST00000364553 KDRP35968 1356 aa12.82□□□□□ -0.36
RN7SKP246-201ENST00000364553 ERVV-2B6SEH9 535 aa12.82□□□□□ -0.36
RN7SKP246-201ENST00000364553 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
RN7SKP246-201ENST00000364553 SBF2Q86WG5 1849 aa12.82□□□□□ -0.36
RN7SKP246-201ENST00000364553 MYBBP1AQ9BQG0 1328 aaKnown RBP12.82□□□□□ -0.36
RN7SKP246-201ENST00000364553 AKAP4Q5JQC9 854 aa12.81□□□□□ -0.36
RN7SKP246-201ENST00000364553 SMARCC1Q92922 1105 aaPredicted RBP12.81□□□□□ -0.36
RN7SKP246-201ENST00000364553 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
RN7SKP246-201ENST00000364553 TMOD3Q9NYL9 352 aa12.81□□□□□ -0.36
RN7SKP246-201ENST00000364553 CABP4P57796 275 aa12.8□□□□□ -0.36
RN7SKP246-201ENST00000364553 SLC27A3Q5K4L6 730 aa12.8□□□□□ -0.36
RN7SKP246-201ENST00000364553 GAS2L2Q8NHY3 880 aa12.8□□□□□ -0.36
RN7SKP246-201ENST00000364553 ANP32CO43423 234 aa12.79□□□□□ -0.36
RN7SKP246-201ENST00000364553 MTHFSDQ2M296 383 aaKnown RBP12.79□□□□□ -0.36
RN7SKP246-201ENST00000364553 PROM2Q8N271 834 aa12.79□□□□□ -0.36
RN7SKP246-201ENST00000364553 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
RN7SKP246-201ENST00000364553 PIGBQ92521 554 aa12.78□□□□□ -0.36
RN7SKP246-201ENST00000364553 TNS1Q9HBL0 1735 aaKnown RBP12.77□□□□□ -0.36
RN7SKP246-201ENST00000364553 GNAT3A8MTJ3 354 aa12.77□□□□□ -0.37
RN7SKP246-201ENST00000364553 RSPH6AQ9H0K4 717 aa12.77□□□□□ -0.37
RN7SKP246-201ENST00000364553 STK32BQ9NY57 414 aa12.77□□□□□ -0.37
RN7SKP246-201ENST00000364553 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
RN7SKP246-201ENST00000364553 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
RN7SKP246-201ENST00000364553 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
RN7SKP246-201ENST00000364553 NFATC2IPQ8NCF5 419 aa12.76□□□□□ -0.37
RN7SKP246-201ENST00000364553 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
RN7SKP246-201ENST00000364553 NHSQ6T4R5 1651 aa12.76□□□□□ -0.37
RN7SKP246-201ENST00000364553 RNMTO43148 476 aaKnown RBP12.75□□□□□ -0.37
RN7SKP246-201ENST00000364553 RTF1Q92541 710 aaKnown RBP12.75□□□□□ -0.37
RN7SKP246-201ENST00000364553 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
RN7SKP246-201ENST00000364553 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
RN7SKP246-201ENST00000364553 MAPK8IP3Q9UPT6 1336 aa12.74□□□□□ -0.37
RN7SKP246-201ENST00000364553 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
RN7SKP246-201ENST00000364553 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
RN7SKP246-201ENST00000364553 LGR6Q9HBX8 967 aa12.74□□□□□ -0.37
RN7SKP246-201ENST00000364553 HTATSF1O43719 755 aaKnown RBP12.73□□□□□ -0.37
RN7SKP246-201ENST00000364553 SLC15A2Q16348 729 aa12.73□□□□□ -0.37
RN7SKP246-201ENST00000364553 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
RN7SKP246-201ENST00000364553 BTAF1O14981 1849 aa12.73□□□□□ -0.37
RN7SKP246-201ENST00000364553 PALLDQ8WX93 1383 aa12.72□□□□□ -0.37
RN7SKP246-201ENST00000364553 TEFQ10587 303 aa12.72□□□□□ -0.37
RN7SKP246-201ENST00000364553 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
RN7SKP246-201ENST00000364553 ASAP1Q9ULH1 1129 aa12.72□□□□□ -0.37
RN7SKP246-201ENST00000364553 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.37
RN7SKP246-201ENST00000364553 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.37
RN7SKP246-201ENST00000364553 DOT1LQ8TEK3 1739 aa12.71□□□□□ -0.37
RN7SKP246-201ENST00000364553 LOC102724428A0A0B4J2F2 783 aa12.71□□□□□ -0.37
RN7SKP246-201ENST00000364553 ATP6V1AP38606 617 aa12.71□□□□□ -0.37
RN7SKP246-201ENST00000364553 SIK1P57059 783 aa12.71□□□□□ -0.37
RN7SKP246-201ENST00000364553 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
RN7SKP246-201ENST00000364553 LRRC4BQ9NT99 713 aa12.71□□□□□ -0.37
RN7SKP246-201ENST00000364553 TFCP2L1Q9NZI6 479 aa12.71□□□□□ -0.37
RN7SKP246-201ENST00000364553 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
RN7SKP246-201ENST00000364553 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
RN7SKP246-201ENST00000364553 ITGB4P16144 1822 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms