RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 OVOS2Q6IE36 1432 aa20.17■□□□□ 0.82
IFT140-201ENST00000361339 MRE11P49959 708 aa20.16■□□□□ 0.82
IFT140-201ENST00000361339 RBM10P98175 930 aaKnown RBP20.16■□□□□ 0.82
IFT140-201ENST00000361339 PLEKHG3A1L390 1219 aa20.16■□□□□ 0.82
IFT140-201ENST00000361339 APBB1O00213 710 aa20.16■□□□□ 0.82
IFT140-201ENST00000361339 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
IFT140-201ENST00000361339 RIMS1Q86UR5 1692 aaKnown RBP20.15■□□□□ 0.82
IFT140-201ENST00000361339 C16orf71Q8IYS4 520 aaPredicted RBP20.15■□□□□ 0.82
IFT140-201ENST00000361339 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.82
IFT140-201ENST00000361339 NGDNQ8NEJ9 315 aaKnown RBP20.14■□□□□ 0.82
IFT140-201ENST00000361339 CHMP5Q9NZZ3 219 aa20.14■□□□□ 0.82
IFT140-201ENST00000361339 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.81
IFT140-201ENST00000361339 ARHGAP45Q92619 1136 aa20.13■□□□□ 0.81
IFT140-201ENST00000361339 ZNF428Q96B54 188 aa20.13■□□□□ 0.81
IFT140-201ENST00000361339 PIK3R4Q99570 1358 aa20.13■□□□□ 0.81
IFT140-201ENST00000361339 GAS2L3Q86XJ1 694 aa20.13■□□□□ 0.81
IFT140-201ENST00000361339 OTUD7AQ8TE49 926 aaPredicted RBP20.13■□□□□ 0.81
IFT140-201ENST00000361339 PLEKHG5O94827 1062 aa20.12■□□□□ 0.81
IFT140-201ENST00000361339 EID1Q9Y6B2 187 aa20.12■□□□□ 0.81
IFT140-201ENST00000361339 NRKQ7Z2Y5 1582 aa20.12■□□□□ 0.81
IFT140-201ENST00000361339 CHL1O00533 1208 aa20.12■□□□□ 0.81
IFT140-201ENST00000361339 G2E3Q7L622 706 aa20.12■□□□□ 0.81
IFT140-201ENST00000361339 F6X3S4 739 aa20.11■□□□□ 0.81
IFT140-201ENST00000361339 NECTIN2Q92692 538 aa20.11■□□□□ 0.81
IFT140-201ENST00000361339 LTV1Q96GA3 475 aaPredicted RBP20.11■□□□□ 0.81
IFT140-201ENST00000361339 RGPD8O14715 1765 aaPredicted RBP20.1■□□□□ 0.81
IFT140-201ENST00000361339 SMARCA5O60264 1052 aaPredicted RBP20.1■□□□□ 0.81
IFT140-201ENST00000361339 EYA1Q99502 592 aa20.1■□□□□ 0.81
IFT140-201ENST00000361339 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
IFT140-201ENST00000361339 RGS12O14924 1447 aa20.09■□□□□ 0.81
IFT140-201ENST00000361339 KCNA6P17658 529 aa20.09■□□□□ 0.81
IFT140-201ENST00000361339 MEIS3Q99687 375 aa20.09■□□□□ 0.81
IFT140-201ENST00000361339 API5Q9BZZ5 524 aaKnown RBP20.09■□□□□ 0.81
IFT140-201ENST00000361339 CD2BP2O95400 341 aaKnown RBP20.08■□□□□ 0.81
IFT140-201ENST00000361339 KIAA1211Q6ZU35 1233 aa20.08■□□□□ 0.81
IFT140-201ENST00000361339 HSCBQ8IWL3 235 aa20.08■□□□□ 0.81
IFT140-201ENST00000361339 SSH2Q76I76 1423 aa20.08■□□□□ 0.81
IFT140-201ENST00000361339 SLC4A2P04920 1241 aa20.08■□□□□ 0.8
IFT140-201ENST00000361339 AMPHP49418 695 aa20.08■□□□□ 0.8
IFT140-201ENST00000361339 MSH6P52701 1360 aa20.08■□□□□ 0.8
IFT140-201ENST00000361339 TOPAZ1Q8N9V7 1692 aa20.08■□□□□ 0.8
IFT140-201ENST00000361339 GSPT1P15170 499 aaKnown RBP20.07■□□□□ 0.8
IFT140-201ENST00000361339 TBC1D9Q6ZT07 1266 aa20.07■□□□□ 0.8
IFT140-201ENST00000361339 ZBTB7CA1YPR0 619 aa20.07■□□□□ 0.8
IFT140-201ENST00000361339 NLRP6P59044 892 aa20.07■□□□□ 0.8
IFT140-201ENST00000361339 SLC4A10Q6U841 1118 aa20.07■□□□□ 0.8
IFT140-201ENST00000361339 USHBP1Q8N6Y0 703 aa20.07■□□□□ 0.8
IFT140-201ENST00000361339 GCC1Q96CN9 775 aa20.07■□□□□ 0.8
IFT140-201ENST00000361339 CEP170BQ9Y4F5 1589 aaPredicted RBP20.06■□□□□ 0.8
IFT140-201ENST00000361339 USP31Q70CQ4 1352 aa20.06■□□□□ 0.8
IFT140-201ENST00000361339 CRB1P82279 1406 aa20.06■□□□□ 0.8
IFT140-201ENST00000361339 BMP2KLQ5H9B9 411 aa20.06■□□□□ 0.8
IFT140-201ENST00000361339 C14orf37Q86TY3 774 aa20.05■□□□□ 0.8
IFT140-201ENST00000361339 KIF2CQ99661 725 aa20.05■□□□□ 0.8
IFT140-201ENST00000361339 TSPYL4Q9UJ04 414 aa20.05■□□□□ 0.8
IFT140-201ENST00000361339 FAM13BQ9NYF5 915 aa20.04■□□□□ 0.8
IFT140-201ENST00000361339 INTS3Q68E01 1043 aaKnown RBP20.03■□□□□ 0.8
IFT140-201ENST00000361339 PLEKHM2Q8IWE5 1019 aa20.03■□□□□ 0.8
IFT140-201ENST00000361339 ATP10DQ9P241 1426 aa20.02■□□□□ 0.8
IFT140-201ENST00000361339 TNPO1Q92973 898 aaKnown RBP20.02■□□□□ 0.8
IFT140-201ENST00000361339 TBX22Q9Y458 520 aa20.02■□□□□ 0.8
IFT140-201ENST00000361339 HSP90AB1P08238 724 aaKnown RBP20.02■□□□□ 0.8
IFT140-201ENST00000361339 CEP85Q6P2H3 762 aa20.02■□□□□ 0.8
IFT140-201ENST00000361339 DIP2AQ14689 1571 aa20.01■□□□□ 0.79
IFT140-201ENST00000361339 DDX11L8A8MPP1 907 aa20.01■□□□□ 0.79
IFT140-201ENST00000361339 RGPD1P0DJD0 1748 aa20.01■□□□□ 0.79
IFT140-201ENST00000361339 NCLP19338 710 aaKnown RBP20.01■□□□□ 0.79
IFT140-201ENST00000361339 RBM25P49756 843 aaKnown RBP20.01■□□□□ 0.79
IFT140-201ENST00000361339 RTF1Q92541 710 aaKnown RBP20.01■□□□□ 0.79
IFT140-201ENST00000361339 DCTPP1Q9H773 170 aa20■□□□□ 0.79
IFT140-201ENST00000361339 NALCNQ8IZF0 1738 aa20■□□□□ 0.79
IFT140-201ENST00000361339 FLT4P35916 1363 aa20■□□□□ 0.79
IFT140-201ENST00000361339 TSHZ3Q63HK5 1081 aa19.99■□□□□ 0.79
IFT140-201ENST00000361339 RTL1A6NKG5 1358 aa19.99■□□□□ 0.79
IFT140-201ENST00000361339 ABTB2Q8N961 1025 aa19.99■□□□□ 0.79
IFT140-201ENST00000361339 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
IFT140-201ENST00000361339 ANKRD44Q8N8A2 993 aa19.98■□□□□ 0.79
IFT140-201ENST00000361339 R3HCC1Q9Y3T6 440 aaKnown RBP19.98■□□□□ 0.79
IFT140-201ENST00000361339 PIK3C2AO00443 1686 aa19.97■□□□□ 0.79
IFT140-201ENST00000361339 IGSF1Q8N6C5 1336 aa19.97■□□□□ 0.79
IFT140-201ENST00000361339 TTC21AQ8NDW8 1320 aa19.97■□□□□ 0.79
IFT140-201ENST00000361339 ARHGAP23Q9P227 1491 aa19.97■□□□□ 0.79
IFT140-201ENST00000361339 HOXC9P31274 260 aa19.97■□□□□ 0.79
IFT140-201ENST00000361339 THEMISQ8N1K5 641 aaPredicted RBP19.97■□□□□ 0.79
IFT140-201ENST00000361339 ARHGEF10O15013 1369 aa19.97■□□□□ 0.79
IFT140-201ENST00000361339 A0A0U1RQG5 324 aaPredicted RBP19.96■□□□□ 0.79
IFT140-201ENST00000361339 CHMP4BQ9H444 224 aaKnown RBP19.96■□□□□ 0.79
IFT140-201ENST00000361339 PODXL2Q9NZ53 605 aa19.96■□□□□ 0.79
IFT140-201ENST00000361339 IL17REQ8NFR9 667 aa19.95■□□□□ 0.78
IFT140-201ENST00000361339 KIAA0232Q92628 1395 aa19.95■□□□□ 0.78
IFT140-201ENST00000361339 SLIT1O75093 1534 aa19.95■□□□□ 0.78
IFT140-201ENST00000361339 PDCL3Q9H2J4 239 aa19.95■□□□□ 0.78
IFT140-201ENST00000361339 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
IFT140-201ENST00000361339 XPCQ01831 940 aaPredicted RBP19.95■□□□□ 0.78
IFT140-201ENST00000361339 MSNP26038 577 aaKnown RBP19.94■□□□□ 0.78
IFT140-201ENST00000361339 KDRP35968 1356 aa19.94■□□□□ 0.78
IFT140-201ENST00000361339 NASPP49321 788 aaPredicted RBP19.94■□□□□ 0.78
IFT140-201ENST00000361339 TTC22Q5TAA0 569 aa19.94■□□□□ 0.78
IFT140-201ENST00000361339 EXOC6BQ9Y2D4 811 aa19.94■□□□□ 0.78
IFT140-201ENST00000361339 TPM2P07951 284 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms