RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ZNF784Q8NCA9 323 aaPredicted RBP29.7■■■□□ 2.35
CD47-202ENST00000361309 ANKRD36BQ8N2N9 1353 aa29.69■■■□□ 2.34
CD47-202ENST00000361309 KCNQ4P56696 695 aa29.69■■■□□ 2.34
CD47-202ENST00000361309 MEGF6O75095 1541 aa29.68■■■□□ 2.34
CD47-202ENST00000361309 SLC24A1O60721 1099 aa29.68■■■□□ 2.34
CD47-202ENST00000361309 ZCRB1Q8TBF4 217 aaKnown RBP29.68■■■□□ 2.34
CD47-202ENST00000361309 SLC16A10Q8TF71 515 aa29.67■■■□□ 2.34
CD47-202ENST00000361309 PNPLA7Q6ZV29 1317 aa29.67■■■□□ 2.34
CD47-202ENST00000361309 NSD2O96028 1365 aa29.66■■■□□ 2.34
CD47-202ENST00000361309 RRS1Q15050 365 aaKnown RBP29.65■■■□□ 2.34
CD47-202ENST00000361309 TFCP2L1Q9NZI6 479 aa29.65■■■□□ 2.34
CD47-202ENST00000361309 RTL1A6NKG5 1358 aa29.64■■■□□ 2.34
CD47-202ENST00000361309 GGNBP2Q9H3C7 697 aa29.63■■■□□ 2.33
CD47-202ENST00000361309 KIF20BQ96Q89 1820 aa29.62■■■□□ 2.33
CD47-202ENST00000361309 FYB1O15117 783 aa29.62■■■□□ 2.33
CD47-202ENST00000361309 POLD1P28340 1107 aa29.62■■■□□ 2.33
CD47-202ENST00000361309 NBPF6Q5VWK0 638 aa29.62■■■□□ 2.33
CD47-202ENST00000361309 KLHL34Q8N239 644 aa29.62■■■□□ 2.33
CD47-202ENST00000361309 NBPF4Q96M43 638 aa29.62■■■□□ 2.33
CD47-202ENST00000361309 USHBP1Q8N6Y0 703 aa29.61■■■□□ 2.33
CD47-202ENST00000361309 TMF1P82094 1093 aa29.59■■■□□ 2.33
CD47-202ENST00000361309 GPR162Q16538 588 aa29.59■■■□□ 2.33
CD47-202ENST00000361309 CCNL1Q9UK58 526 aaPredicted RBP29.59■■■□□ 2.33
CD47-202ENST00000361309 GOLGB1Q14789 3259 aaKnown RBP29.57■■■□□ 2.32
CD47-202ENST00000361309 SMG6Q86US8 1419 aaKnown RBP29.56■■■□□ 2.32
CD47-202ENST00000361309 CGNL1Q0VF96 1302 aa29.56■■■□□ 2.32
CD47-202ENST00000361309 RAPGEF4Q8WZA2 1011 aa29.56■■■□□ 2.32
CD47-202ENST00000361309 USP47Q96K76 1375 aa29.55■■■□□ 2.32
CD47-202ENST00000361309 C5P01031 1676 aa29.53■■■□□ 2.32
CD47-202ENST00000361309 TAF1LQ8IZX4 1826 aa29.52■■■□□ 2.32
CD47-202ENST00000361309 TATP17735 454 aaPredicted RBP29.52■■■□□ 2.32
CD47-202ENST00000361309 HSP90AB2PQ58FF8 381 aa29.52■■■□□ 2.32
CD47-202ENST00000361309 PELP1Q8IZL8 1130 aaKnown RBP29.52■■■□□ 2.32
CD47-202ENST00000361309 MSH5O43196 834 aa29.51■■■□□ 2.31
CD47-202ENST00000361309 INSRP06213 1382 aa29.51■■■□□ 2.31
CD47-202ENST00000361309 ITGB4P16144 1822 aa29.5■■■□□ 2.31
CD47-202ENST00000361309 COL23A1Q86Y22 540 aaPredicted RBP29.5■■■□□ 2.31
CD47-202ENST00000361309 NLGN2Q8NFZ4 835 aa29.5■■■□□ 2.31
CD47-202ENST00000361309 FLT4P35916 1363 aa29.49■■■□□ 2.31
CD47-202ENST00000361309 PCDH11XQ9BZA7 1347 aa29.47■■■□□ 2.31
CD47-202ENST00000361309 PCDH11YQ9BZA8 1340 aa29.47■■■□□ 2.31
CD47-202ENST00000361309 TOGARAM1Q9Y4F4 1720 aa29.46■■■□□ 2.31
CD47-202ENST00000361309 CDCA8Q53HL2 280 aa29.46■■■□□ 2.31
CD47-202ENST00000361309 KIF24Q5T7B8 1368 aa29.45■■■□□ 2.31
CD47-202ENST00000361309 PKD1L3Q7Z443 1732 aa29.44■■■□□ 2.3
CD47-202ENST00000361309 MSL1Q68DK7 614 aa29.43■■■□□ 2.3
CD47-202ENST00000361309 MPRIPQ6WCQ1 1025 aa29.43■■■□□ 2.3
CD47-202ENST00000361309 CYP27B1O15528 508 aa29.42■■■□□ 2.3
CD47-202ENST00000361309 C1QTNF8P60827 252 aa29.42■■■□□ 2.3
CD47-202ENST00000361309 CARD14Q9BXL6 1004 aa29.42■■■□□ 2.3
CD47-202ENST00000361309 MAP2P11137 1827 aaKnown RBP29.42■■■□□ 2.3
CD47-202ENST00000361309 PALLDQ8WX93 1383 aa29.41■■■□□ 2.3
CD47-202ENST00000361309 EMILIN1Q9Y6C2 1016 aa29.41■■■□□ 2.3
CD47-202ENST00000361309 NSD3Q9BZ95 1437 aa29.4■■■□□ 2.3
CD47-202ENST00000361309 C4BP0C0L5 1744 aa29.39■■■□□ 2.3
CD47-202ENST00000361309 ANKRD26Q9UPS8 1709 aa29.38■■■□□ 2.29
CD47-202ENST00000361309 SENP3-EIF4A1A0A087X0R7 540 aa29.38■■■□□ 2.29
CD47-202ENST00000361309 YBX3P16989 372 aaKnown RBP eCLIP29.38■■■□□ 2.29
CD47-202ENST00000361309 UBR3Q6ZT12 1888 aa29.36■■■□□ 2.29
CD47-202ENST00000361309 HMGB2P26583 209 aaKnown RBP29.36■■■□□ 2.29
CD47-202ENST00000361309 FLAD1Q8NFF5 587 aa29.36■■■□□ 2.29
CD47-202ENST00000361309 PPM1GO15355 546 aaPredicted RBP29.35■■■□□ 2.29
CD47-202ENST00000361309 GRIN3BO60391 1043 aa29.34■■■□□ 2.29
CD47-202ENST00000361309 SMARCC1Q92922 1105 aaPredicted RBP29.34■■■□□ 2.29
CD47-202ENST00000361309 NCAPD2Q15021 1401 aa29.34■■■□□ 2.29
CD47-202ENST00000361309 GIGYF1O75420 1035 aaPredicted RBP29.32■■■□□ 2.28
CD47-202ENST00000361309 PIGBQ92521 554 aa29.32■■■□□ 2.28
CD47-202ENST00000361309 TRIM26Q12899 539 aaPredicted RBP29.31■■■□□ 2.28
CD47-202ENST00000361309 AK7Q96M32 723 aa29.31■■■□□ 2.28
CD47-202ENST00000361309 NKX1-1Q15270 411 aaPredicted RBP29.3■■■□□ 2.28
CD47-202ENST00000361309 SPG7Q9UQ90 795 aa29.3■■■□□ 2.28
CD47-202ENST00000361309 CD2APQ9Y5K6 639 aa29.3■■■□□ 2.28
CD47-202ENST00000361309 AMIGO3Q86WK7 504 aa29.29■■■□□ 2.28
CD47-202ENST00000361309 WASHC2AQ641Q2 1341 aa29.28■■■□□ 2.28
CD47-202ENST00000361309 SMIM5Q71RC9 77 aa29.27■■■□□ 2.28
CD47-202ENST00000361309 EYA1Q99502 592 aa29.27■■■□□ 2.28
CD47-202ENST00000361309 PHF14O94880 888 aa29.26■■■□□ 2.27
CD47-202ENST00000361309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.23■■■□□ 2.27
CD47-202ENST00000361309 LOC102724428A0A0B4J2F2 783 aa29.23■■■□□ 2.27
CD47-202ENST00000361309 SIK1P57059 783 aa29.23■■■□□ 2.27
CD47-202ENST00000361309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.23■■■□□ 2.27
CD47-202ENST00000361309 POLKQ9UBT6 870 aa29.23■■■□□ 2.27
CD47-202ENST00000361309 LINC00116Q8NCU8 138 aa29.22■■■□□ 2.27
CD47-202ENST00000361309 TMOD3Q9NYL9 352 aa29.22■■■□□ 2.27
CD47-202ENST00000361309 ASAP1Q9ULH1 1129 aa29.21■■■□□ 2.27
CD47-202ENST00000361309 SSFA2P28290 1259 aa29.2■■■□□ 2.26
CD47-202ENST00000361309 PHKG2P15735 406 aa29.19■■■□□ 2.26
CD47-202ENST00000361309 IFNL2Q8IZJ0 200 aa29.19■■■□□ 2.26
CD47-202ENST00000361309 ATP10DQ9P241 1426 aa29.19■■■□□ 2.26
CD47-202ENST00000361309 POLR3GLQ9BT43 218 aa29.18■■■□□ 2.26
CD47-202ENST00000361309 TIMELESSQ9UNS1 1208 aa29.18■■■□□ 2.26
CD47-202ENST00000361309 TNNT2P45379 298 aaPredicted RBP29.17■■■□□ 2.26
CD47-202ENST00000361309 ITPK1Q13572 414 aa29.17■■■□□ 2.26
CD47-202ENST00000361309 ATP6V1AP38606 617 aa29.16■■■□□ 2.26
CD47-202ENST00000361309 EIF4A2Q14240 407 aaKnown RBP29.16■■■□□ 2.26
CD47-202ENST00000361309 CEP350Q5VT06 3117 aa29.16■■■□□ 2.26
CD47-202ENST00000361309 IGSF1Q8N6C5 1336 aa29.16■■■□□ 2.26
CD47-202ENST00000361309 GNPATO15228 680 aa29.15■■■□□ 2.26
CD47-202ENST00000361309 ATG3Q9NT62 314 aa29.14■■■□□ 2.26
CD47-202ENST00000361309 WWC3Q9ULE0 1092 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms