RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 NUTM2GQ5VZR2 741 aa23.23■■□□□ 1.31
PDLIM7-203ENST00000359895 NPM2Q86SE8 214 aaKnown RBP23.23■■□□□ 1.31
PDLIM7-203ENST00000359895 FBXO41Q8TF61 875 aa23.23■■□□□ 1.31
PDLIM7-203ENST00000359895 ZBTB40Q9NUA8 1239 aa23.23■■□□□ 1.31
PDLIM7-203ENST00000359895 CRB1P82279 1406 aa23.22■■□□□ 1.31
PDLIM7-203ENST00000359895 RTF1Q92541 710 aaKnown RBP23.22■■□□□ 1.31
PDLIM7-203ENST00000359895 API5Q9BZZ5 524 aaKnown RBP23.22■■□□□ 1.31
PDLIM7-203ENST00000359895 LRRC37A3O60309 1634 aa23.22■■□□□ 1.31
PDLIM7-203ENST00000359895 MTHFSDQ2M296 383 aaKnown RBP23.21■■□□□ 1.31
PDLIM7-203ENST00000359895 KCNH5Q8NCM2 988 aa23.21■■□□□ 1.31
PDLIM7-203ENST00000359895 CERKQ8TCT0 537 aa23.21■■□□□ 1.31
PDLIM7-203ENST00000359895 ZBTB47Q9UFB7 747 aaPredicted RBP23.21■■□□□ 1.31
PDLIM7-203ENST00000359895 MCM10Q7L590 875 aa23.2■■□□□ 1.3
PDLIM7-203ENST00000359895 PDZRN3Q9UPQ7 1066 aa23.2■■□□□ 1.3
PDLIM7-203ENST00000359895 ELL2O00472 640 aaPredicted RBP23.19■■□□□ 1.3
PDLIM7-203ENST00000359895 RBM33Q96EV2 1170 aaKnown RBP23.19■■□□□ 1.3
PDLIM7-203ENST00000359895 ABCC4O15439 1325 aa23.19■■□□□ 1.3
PDLIM7-203ENST00000359895 DDRGK1Q96HY6 314 aa23.18■■□□□ 1.3
PDLIM7-203ENST00000359895 LTBP4Q8N2S1 1624 aa23.18■■□□□ 1.3
PDLIM7-203ENST00000359895 IP6K1Q92551 441 aa23.18■■□□□ 1.3
PDLIM7-203ENST00000359895 TRPM3Q9HCF6 1732 aaPredicted RBP23.17■■□□□ 1.3
PDLIM7-203ENST00000359895 PROSER2Q86WR7 435 aaPredicted RBP23.17■■□□□ 1.3
PDLIM7-203ENST00000359895 SLIT3O75094 1523 aa23.16■■□□□ 1.3
PDLIM7-203ENST00000359895 ZBTB7BO15156 539 aaPredicted RBP23.14■■□□□ 1.29
PDLIM7-203ENST00000359895 SMC5Q8IY18 1101 aa23.14■■□□□ 1.29
PDLIM7-203ENST00000359895 CACNA1FO60840 1977 aa23.13■■□□□ 1.29
PDLIM7-203ENST00000359895 GNAT3A8MTJ3 354 aa23.13■■□□□ 1.29
PDLIM7-203ENST00000359895 FOXO3O43524 673 aa23.13■■□□□ 1.29
PDLIM7-203ENST00000359895 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
PDLIM7-203ENST00000359895 C1orf167Q5SNV9 1468 aa23.11■■□□□ 1.29
PDLIM7-203ENST00000359895 NCOA3Q9Y6Q9 1424 aa23.11■■□□□ 1.29
PDLIM7-203ENST00000359895 MAP3K5Q99683 1374 aa23.11■■□□□ 1.29
PDLIM7-203ENST00000359895 TSPYL4Q9UJ04 414 aa23.11■■□□□ 1.29
PDLIM7-203ENST00000359895 PTPRCP08575 1304 aa23.1■■□□□ 1.29
PDLIM7-203ENST00000359895 ORAI2Q96SN7 254 aa23.1■■□□□ 1.29
PDLIM7-203ENST00000359895 BABAM1Q9NWV8 329 aa23.1■■□□□ 1.29
PDLIM7-203ENST00000359895 MST1RQ04912 1400 aa23.1■■□□□ 1.29
PDLIM7-203ENST00000359895 LTV1Q96GA3 475 aaPredicted RBP23.1■■□□□ 1.29
PDLIM7-203ENST00000359895 DCCP43146 1447 aa23.09■■□□□ 1.29
PDLIM7-203ENST00000359895 RGPD2P0DJD1 1756 aa23.09■■□□□ 1.29
PDLIM7-203ENST00000359895 SOS1Q07889 1333 aaPredicted RBP23.09■■□□□ 1.29
PDLIM7-203ENST00000359895 XIRP1Q702N8 1843 aaKnown RBP23.08■■□□□ 1.29
PDLIM7-203ENST00000359895 INTS3Q68E01 1043 aaKnown RBP23.07■■□□□ 1.28
PDLIM7-203ENST00000359895 ALS2Q96Q42 1657 aa23.07■■□□□ 1.28
PDLIM7-203ENST00000359895 USP19O94966 1318 aa23.07■■□□□ 1.28
PDLIM7-203ENST00000359895 MSH6P52701 1360 aa23.06■■□□□ 1.28
PDLIM7-203ENST00000359895 LMO7Q8WWI1 1683 aa23.06■■□□□ 1.28
PDLIM7-203ENST00000359895 KRT24Q2M2I5 525 aa23.06■■□□□ 1.28
PDLIM7-203ENST00000359895 KRT28Q7Z3Y7 464 aa23.06■■□□□ 1.28
PDLIM7-203ENST00000359895 GCC1Q96CN9 775 aa23.06■■□□□ 1.28
PDLIM7-203ENST00000359895 GCP02774 474 aa23.05■■□□□ 1.28
PDLIM7-203ENST00000359895 FAM208AQ9UK61 1670 aaKnown RBP23.05■■□□□ 1.28
PDLIM7-203ENST00000359895 CAMTA1Q9Y6Y1 1673 aa23.05■■□□□ 1.28
PDLIM7-203ENST00000359895 RGS12O14924 1447 aa23.04■■□□□ 1.28
PDLIM7-203ENST00000359895 ARHGEF25Q86VW2 580 aa23.04■■□□□ 1.28
PDLIM7-203ENST00000359895 NUCB1Q02818 461 aa23.03■■□□□ 1.28
PDLIM7-203ENST00000359895 NCAPD2Q15021 1401 aa23.03■■□□□ 1.28
PDLIM7-203ENST00000359895 ATF3P18847 181 aa23.02■■□□□ 1.28
PDLIM7-203ENST00000359895 TAF7Q15545 349 aaPredicted RBP23.01■■□□□ 1.27
PDLIM7-203ENST00000359895 MIS18AQ9NYP9 233 aa23.01■■□□□ 1.27
PDLIM7-203ENST00000359895 NBPF6Q5VWK0 638 aa23.01■■□□□ 1.27
PDLIM7-203ENST00000359895 NBPF4Q96M43 638 aa23.01■■□□□ 1.27
PDLIM7-203ENST00000359895 MED1Q15648 1581 aaPredicted RBP23■■□□□ 1.27
PDLIM7-203ENST00000359895 TMEM94Q12767 1356 aa23■■□□□ 1.27
PDLIM7-203ENST00000359895 SLC4A2P04920 1241 aa23■■□□□ 1.27
PDLIM7-203ENST00000359895 USHBP1Q8N6Y0 703 aa23■■□□□ 1.27
PDLIM7-203ENST00000359895 IL17REQ8NFR9 667 aa23■■□□□ 1.27
PDLIM7-203ENST00000359895 ZBTB7CA1YPR0 619 aa22.99■■□□□ 1.27
PDLIM7-203ENST00000359895 XPCQ01831 940 aaPredicted RBP22.99■■□□□ 1.27
PDLIM7-203ENST00000359895 STK31Q9BXU1 1019 aa22.99■■□□□ 1.27
PDLIM7-203ENST00000359895 KDM3BQ7LBC6 1761 aa22.99■■□□□ 1.27
PDLIM7-203ENST00000359895 CEMIPQ8WUJ3 1361 aa22.98■■□□□ 1.27
PDLIM7-203ENST00000359895 CHD1LQ86WJ1 897 aa22.98■■□□□ 1.27
PDLIM7-203ENST00000359895 UPF2Q9HAU5 1272 aaKnown RBP22.98■■□□□ 1.27
PDLIM7-203ENST00000359895 N4BP2Q86UW6 1770 aaPredicted RBP22.98■■□□□ 1.27
PDLIM7-203ENST00000359895 RGPD5Q99666 1765 aa22.98■■□□□ 1.27
PDLIM7-203ENST00000359895 PLEKHO1Q53GL0 409 aaPredicted RBP22.97■■□□□ 1.27
PDLIM7-203ENST00000359895 CCDC30Q5VVM6 783 aa22.97■■□□□ 1.27
PDLIM7-203ENST00000359895 LMOD2Q6P5Q4 547 aa22.97■■□□□ 1.27
PDLIM7-203ENST00000359895 AMOTQ4VCS5 1084 aa22.97■■□□□ 1.27
PDLIM7-203ENST00000359895 C1orf115Q9H7X2 142 aa22.96■■□□□ 1.27
PDLIM7-203ENST00000359895 DAXXQ9UER7 740 aaPredicted RBP22.96■■□□□ 1.27
PDLIM7-203ENST00000359895 CADPS2Q86UW7 1296 aa22.95■■□□□ 1.26
PDLIM7-203ENST00000359895 CCT4P50991 539 aaKnown RBP22.94■■□□□ 1.26
PDLIM7-203ENST00000359895 RPAP2Q8IXW5 612 aaPredicted RBP22.94■■□□□ 1.26
PDLIM7-203ENST00000359895 ANKRD24Q8TF21 1146 aa22.94■■□□□ 1.26
PDLIM7-203ENST00000359895 CHMP4AQ9BY43 222 aa22.94■■□□□ 1.26
PDLIM7-203ENST00000359895 OVOS2A0A0G2JMS6 1433 aa22.94■■□□□ 1.26
PDLIM7-203ENST00000359895 AKAP4Q5JQC9 854 aa22.93■■□□□ 1.26
PDLIM7-203ENST00000359895 SIRT2Q8IXJ6 389 aa22.93■■□□□ 1.26
PDLIM7-203ENST00000359895 SEC24BO95487 1268 aa22.92■■□□□ 1.26
PDLIM7-203ENST00000359895 ANKRD45Q5TZF3 282 aa22.92■■□□□ 1.26
PDLIM7-203ENST00000359895 ANKRD44Q8N8A2 993 aa22.92■■□□□ 1.26
PDLIM7-203ENST00000359895 LRRC59Q96AG4 307 aaKnown RBP22.92■■□□□ 1.26
PDLIM7-203ENST00000359895 LNPKQ9C0E8 428 aa22.92■■□□□ 1.26
PDLIM7-203ENST00000359895 ABCC6O95255 1503 aa22.92■■□□□ 1.26
PDLIM7-203ENST00000359895 NPHP3Q7Z494 1330 aa22.91■■□□□ 1.26
PDLIM7-203ENST00000359895 ATP10DQ9P241 1426 aa22.9■■□□□ 1.26
PDLIM7-203ENST00000359895 ZNF530Q6P9A1 599 aaPredicted RBP22.9■■□□□ 1.26
PDLIM7-203ENST00000359895 HOXB7P09629 217 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms