RNA–Protein interactions for RNA: ENST00000359751.8

EFNA4-201, Transcript of ephrin A4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EFNA4, Length 1,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4-201ENST00000359751 PCDH11XQ9BZA7 1347 aa21.34■■□□□ 1.01
EFNA4-201ENST00000359751 PCDH11YQ9BZA8 1340 aa21.34■■□□□ 1.01
EFNA4-201ENST00000359751 ANP32CO43423 234 aa21.34■■□□□ 1.01
EFNA4-201ENST00000359751 ZCRB1Q8TBF4 217 aaKnown RBP21.34■■□□□ 1.01
EFNA4-201ENST00000359751 SPG7Q9UQ90 795 aa21.34■■□□□ 1.01
EFNA4-201ENST00000359751 MEGF6O75095 1541 aa21.34■■□□□ 1.01
EFNA4-201ENST00000359751 PKD1L3Q7Z443 1732 aa21.33■■□□□ 1.01
EFNA4-201ENST00000359751 USHBP1Q8N6Y0 703 aa21.33■■□□□ 1.01
EFNA4-201ENST00000359751 AMOTQ4VCS5 1084 aa21.32■■□□□ 1
EFNA4-201ENST00000359751 SF3B2Q13435 895 aaKnown RBP21.31■■□□□ 1
EFNA4-201ENST00000359751 SULT6B1Q6IMI4 303 aa21.3■■□□□ 1
EFNA4-201ENST00000359751 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
EFNA4-201ENST00000359751 PLEKHO1Q53GL0 409 aaPredicted RBP21.29■■□□□ 1
EFNA4-201ENST00000359751 U2SURPO15042 1029 aaKnown RBP21.28■■□□□ 1
EFNA4-201ENST00000359751 NEFMP07197 916 aa21.27■■□□□ 1
EFNA4-201ENST00000359751 HSP90AB1P08238 724 aaKnown RBP21.26■□□□□ 0.99
EFNA4-201ENST00000359751 MARCH10Q8NA82 808 aaPredicted RBP21.26■□□□□ 0.99
EFNA4-201ENST00000359751 SHANK3Q9BYB0 1731 aa21.26■□□□□ 0.99
EFNA4-201ENST00000359751 FCHSD2O94868 740 aa21.25■□□□□ 0.99
EFNA4-201ENST00000359751 KAT6BQ8WYB5 2073 aa21.24■□□□□ 0.99
EFNA4-201ENST00000359751 U2AF1L5P0DN76 240 aaPredicted RBP21.24■□□□□ 0.99
EFNA4-201ENST00000359751 U2AF1Q01081 240 aaKnown RBP eCLIP21.24■□□□□ 0.99
EFNA4-201ENST00000359751 IFNL2Q8IZJ0 200 aa21.24■□□□□ 0.99
EFNA4-201ENST00000359751 DDX54Q8TDD1 881 aaKnown RBP21.24■□□□□ 0.99
EFNA4-201ENST00000359751 UPF1Q92900 1129 aaKnown RBP eCLIP21.24■□□□□ 0.99
EFNA4-201ENST00000359751 SBF2Q86WG5 1849 aa21.24■□□□□ 0.99
EFNA4-201ENST00000359751 C1orf141Q5JVX7 400 aa21.22■□□□□ 0.99
EFNA4-201ENST00000359751 AEBP1Q8IUX7 1158 aa21.22■□□□□ 0.99
EFNA4-201ENST00000359751 HMOX1P09601 288 aa21.21■□□□□ 0.99
EFNA4-201ENST00000359751 NHSQ6T4R5 1651 aa21.21■□□□□ 0.99
EFNA4-201ENST00000359751 BAG6P46379 1132 aa21.2■□□□□ 0.98
EFNA4-201ENST00000359751 WDR43Q15061 677 aaKnown RBP eCLIP21.2■□□□□ 0.98
EFNA4-201ENST00000359751 NKX1-1Q15270 411 aaPredicted RBP21.2■□□□□ 0.98
EFNA4-201ENST00000359751 GAS2L2Q8NHY3 880 aa21.2■□□□□ 0.98
EFNA4-201ENST00000359751 BCL11BQ9C0K0 894 aaPredicted RBP21.2■□□□□ 0.98
EFNA4-201ENST00000359751 HMGB2P26583 209 aaKnown RBP21.19■□□□□ 0.98
EFNA4-201ENST00000359751 ZNF530Q6P9A1 599 aaPredicted RBP21.19■□□□□ 0.98
EFNA4-201ENST00000359751 EP400Q96L91 3159 aa21.19■□□□□ 0.98
EFNA4-201ENST00000359751 TNS1Q9HBL0 1735 aaKnown RBP21.18■□□□□ 0.98
EFNA4-201ENST00000359751 RGPD3A6NKT7 1758 aaPredicted RBP21.18■□□□□ 0.98
EFNA4-201ENST00000359751 RGPD4Q7Z3J3 1758 aa21.18■□□□□ 0.98
EFNA4-201ENST00000359751 FAM182BQ5T319 152 aa21.18■□□□□ 0.98
EFNA4-201ENST00000359751 CYP27B1O15528 508 aa21.17■□□□□ 0.98
EFNA4-201ENST00000359751 TRIM37O94972 964 aa21.17■□□□□ 0.98
EFNA4-201ENST00000359751 PHKG2P15735 406 aa21.17■□□□□ 0.98
EFNA4-201ENST00000359751 DCAF5Q96JK2 942 aa21.17■□□□□ 0.98
EFNA4-201ENST00000359751 RSPH6AQ9H0K4 717 aa21.17■□□□□ 0.98
EFNA4-201ENST00000359751 DOT1LQ8TEK3 1739 aa21.16■□□□□ 0.98
EFNA4-201ENST00000359751 PRKAR2BP31323 418 aa21.16■□□□□ 0.98
EFNA4-201ENST00000359751 AKAP4Q5JQC9 854 aa21.16■□□□□ 0.98
EFNA4-201ENST00000359751 MAPK8IP3Q9UPT6 1336 aa21.14■□□□□ 0.97
EFNA4-201ENST00000359751 ERVV-2B6SEH9 535 aa21.12■□□□□ 0.97
EFNA4-201ENST00000359751 PLSCR1O15162 318 aa21.12■□□□□ 0.97
EFNA4-201ENST00000359751 APBA3O96018 575 aa21.12■□□□□ 0.97
EFNA4-201ENST00000359751 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
EFNA4-201ENST00000359751 SYTL4Q96C24 671 aaPredicted RBP21.1■□□□□ 0.97
EFNA4-201ENST00000359751 MRS2Q9HD23 443 aa21.1■□□□□ 0.97
EFNA4-201ENST00000359751 BTAF1O14981 1849 aa21.1■□□□□ 0.97
EFNA4-201ENST00000359751 SCN11AQ9UI33 1791 aa21.1■□□□□ 0.97
EFNA4-201ENST00000359751 ITGB4P16144 1822 aa21.09■□□□□ 0.97
EFNA4-201ENST00000359751 GNAT3A8MTJ3 354 aa21.09■□□□□ 0.97
EFNA4-201ENST00000359751 HTATSF1O43719 755 aaKnown RBP21.09■□□□□ 0.97
EFNA4-201ENST00000359751 MTHFSDQ2M296 383 aaKnown RBP21.09■□□□□ 0.97
EFNA4-201ENST00000359751 ACSBG1Q96GR2 724 aa21.09■□□□□ 0.97
EFNA4-201ENST00000359751 TMOD3Q9NYL9 352 aa21.09■□□□□ 0.97
EFNA4-201ENST00000359751 PRIM1P49642 420 aaKnown RBP21.08■□□□□ 0.97
EFNA4-201ENST00000359751 SMARCC1Q92922 1105 aaPredicted RBP21.08■□□□□ 0.97
EFNA4-201ENST00000359751 DIEXFQ68CQ4 756 aaKnown RBP21.07■□□□□ 0.96
EFNA4-201ENST00000359751 RTF1Q92541 710 aaKnown RBP21.07■□□□□ 0.96
EFNA4-201ENST00000359751 TOGARAM1Q9Y4F4 1720 aa21.07■□□□□ 0.96
EFNA4-201ENST00000359751 ADAMTS7Q9UKP4 1686 aa21.06■□□□□ 0.96
EFNA4-201ENST00000359751 LMOD3Q0VAK6 560 aa21.06■□□□□ 0.96
EFNA4-201ENST00000359751 VIRMAQ69YN4 1812 aaKnown RBP21.06■□□□□ 0.96
EFNA4-201ENST00000359751 RUNDC1Q96C34 613 aa21.05■□□□□ 0.96
EFNA4-201ENST00000359751 PLEKHF1Q96S99 279 aa21.05■□□□□ 0.96
EFNA4-201ENST00000359751 KDM6AO15550 1401 aaPredicted RBP21.04■□□□□ 0.96
EFNA4-201ENST00000359751 KCNQ2O43526 872 aa21.04■□□□□ 0.96
EFNA4-201ENST00000359751 CABP4P57796 275 aa21.04■□□□□ 0.96
EFNA4-201ENST00000359751 PHACTR3Q96KR7 559 aa21.04■□□□□ 0.96
EFNA4-201ENST00000359751 MRC1P22897 1456 aa21.04■□□□□ 0.96
EFNA4-201ENST00000359751 CCER2I3L3R5 266 aa21.03■□□□□ 0.96
EFNA4-201ENST00000359751 SLC27A3Q5K4L6 730 aa21.03■□□□□ 0.96
EFNA4-201ENST00000359751 MPRIPQ6WCQ1 1025 aa21.03■□□□□ 0.96
EFNA4-201ENST00000359751 CAMKK2Q96RR4 588 aa21.03■□□□□ 0.96
EFNA4-201ENST00000359751 RNMTO43148 476 aaKnown RBP21.02■□□□□ 0.96
EFNA4-201ENST00000359751 NFE2L2Q16236 605 aa21.02■□□□□ 0.96
EFNA4-201ENST00000359751 ADAMTS8Q9UP79 889 aa21.02■□□□□ 0.96
EFNA4-201ENST00000359751 RREB1Q92766 1687 aa21.02■□□□□ 0.95
EFNA4-201ENST00000359751 EN1Q05925 392 aaPredicted RBP21.01■□□□□ 0.95
EFNA4-201ENST00000359751 TEFQ10587 303 aa21.01■□□□□ 0.95
EFNA4-201ENST00000359751 DEFB132Q7Z7B7 95 aa21.01■□□□□ 0.95
EFNA4-201ENST00000359751 SLC52A2Q9HAB3 445 aa21.01■□□□□ 0.95
EFNA4-201ENST00000359751 PNISRQ8TF01 805 aaKnown RBP21■□□□□ 0.95
EFNA4-201ENST00000359751 LY75O60449 1722 aa21■□□□□ 0.95
EFNA4-201ENST00000359751 CEMIPQ8WUJ3 1361 aa20.99■□□□□ 0.95
EFNA4-201ENST00000359751 PIGBQ92521 554 aa20.99■□□□□ 0.95
EFNA4-201ENST00000359751 DLG5Q8TDM6 1919 aa20.99■□□□□ 0.95
EFNA4-201ENST00000359751 PALLDQ8WX93 1383 aa20.98■□□□□ 0.95
EFNA4-201ENST00000359751 NBPF14Q5TI25 921 aa20.98■□□□□ 0.95
EFNA4-201ENST00000359751 EZH2Q15910 746 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms