RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 UTRNP46939 3433 aa32.4■■■□□ 2.78
YIF1A-201ENST00000359461 FBLN1P23142 703 aa32.39■■■□□ 2.78
YIF1A-201ENST00000359461 AMPHP49418 695 aa32.39■■■□□ 2.78
YIF1A-201ENST00000359461 ARXQ96QS3 562 aa32.37■■■□□ 2.77
YIF1A-201ENST00000359461 USP47Q96K76 1375 aa32.36■■■□□ 2.77
YIF1A-201ENST00000359461 FYB1O15117 783 aa32.34■■■□□ 2.77
YIF1A-201ENST00000359461 ZCRB1Q8TBF4 217 aaKnown RBP32.34■■■□□ 2.77
YIF1A-201ENST00000359461 PNPLA7Q6ZV29 1317 aa32.33■■■□□ 2.77
YIF1A-201ENST00000359461 PRIM1P49642 420 aaKnown RBP32.33■■■□□ 2.77
YIF1A-201ENST00000359461 SLC16A10Q8TF71 515 aa32.33■■■□□ 2.77
YIF1A-201ENST00000359461 RRS1Q15050 365 aaKnown RBP32.32■■■□□ 2.76
YIF1A-201ENST00000359461 TMF1P82094 1093 aa32.31■■■□□ 2.76
YIF1A-201ENST00000359461 NBPF6Q5VWK0 638 aa32.31■■■□□ 2.76
YIF1A-201ENST00000359461 NBPF4Q96M43 638 aa32.31■■■□□ 2.76
YIF1A-201ENST00000359461 CGNL1Q0VF96 1302 aa32.3■■■□□ 2.76
YIF1A-201ENST00000359461 SMG6Q86US8 1419 aaKnown RBP32.3■■■□□ 2.76
YIF1A-201ENST00000359461 SYTL4Q96C24 671 aaPredicted RBP32.3■■■□□ 2.76
YIF1A-201ENST00000359461 ANKRD26Q9UPS8 1709 aa32.29■■■□□ 2.76
YIF1A-201ENST00000359461 GGNBP2Q9H3C7 697 aa32.29■■■□□ 2.76
YIF1A-201ENST00000359461 C5P01031 1676 aa32.29■■■□□ 2.76
YIF1A-201ENST00000359461 KIF24Q5T7B8 1368 aa32.28■■■□□ 2.76
YIF1A-201ENST00000359461 PKD1L3Q7Z443 1732 aa32.27■■■□□ 2.76
YIF1A-201ENST00000359461 TAF1LQ8IZX4 1826 aa32.27■■■□□ 2.76
YIF1A-201ENST00000359461 INSRP06213 1382 aa32.27■■■□□ 2.76
YIF1A-201ENST00000359461 KCNQ4P56696 695 aa32.26■■■□□ 2.75
YIF1A-201ENST00000359461 TOGARAM1Q9Y4F4 1720 aa32.26■■■□□ 2.75
YIF1A-201ENST00000359461 FLT4P35916 1363 aa32.25■■■□□ 2.75
YIF1A-201ENST00000359461 ZNF784Q8NCA9 323 aaPredicted RBP32.25■■■□□ 2.75
YIF1A-201ENST00000359461 ITGB4P16144 1822 aa32.23■■■□□ 2.75
YIF1A-201ENST00000359461 USHBP1Q8N6Y0 703 aa32.23■■■□□ 2.75
YIF1A-201ENST00000359461 TFCP2L1Q9NZI6 479 aa32.23■■■□□ 2.75
YIF1A-201ENST00000359461 RAPGEF4Q8WZA2 1011 aa32.21■■■□□ 2.75
YIF1A-201ENST00000359461 CCNL1Q9UK58 526 aaPredicted RBP32.21■■■□□ 2.75
YIF1A-201ENST00000359461 NCAPD2Q15021 1401 aa32.2■■■□□ 2.75
YIF1A-201ENST00000359461 POLD1P28340 1107 aa32.2■■■□□ 2.75
YIF1A-201ENST00000359461 CDCA8Q53HL2 280 aa32.2■■■□□ 2.75
YIF1A-201ENST00000359461 HSP90AB2PQ58FF8 381 aa32.19■■■□□ 2.74
YIF1A-201ENST00000359461 PCDH11XQ9BZA7 1347 aa32.18■■■□□ 2.74
YIF1A-201ENST00000359461 PCDH11YQ9BZA8 1340 aa32.18■■■□□ 2.74
YIF1A-201ENST00000359461 TATP17735 454 aaPredicted RBP32.17■■■□□ 2.74
YIF1A-201ENST00000359461 NSD3Q9BZ95 1437 aa32.15■■■□□ 2.74
YIF1A-201ENST00000359461 MAP2P11137 1827 aaKnown RBP32.14■■■□□ 2.74
YIF1A-201ENST00000359461 GOLGB1Q14789 3259 aaKnown RBP32.14■■■□□ 2.74
YIF1A-201ENST00000359461 CARD14Q9BXL6 1004 aa32.14■■■□□ 2.74
YIF1A-201ENST00000359461 TRIM26Q12899 539 aaPredicted RBP32.12■■■□□ 2.73
YIF1A-201ENST00000359461 C4BP0C0L5 1744 aa32.12■■■□□ 2.73
YIF1A-201ENST00000359461 GPR162Q16538 588 aa32.1■■■□□ 2.73
YIF1A-201ENST00000359461 COL23A1Q86Y22 540 aaPredicted RBP32.1■■■□□ 2.73
YIF1A-201ENST00000359461 UBR3Q6ZT12 1888 aa32.1■■■□□ 2.73
YIF1A-201ENST00000359461 PALLDQ8WX93 1383 aa32.09■■■□□ 2.73
YIF1A-201ENST00000359461 CYP27B1O15528 508 aa32.09■■■□□ 2.73
YIF1A-201ENST00000359461 KLHL34Q8N239 644 aa32.09■■■□□ 2.73
YIF1A-201ENST00000359461 EMILIN1Q9Y6C2 1016 aa32.09■■■□□ 2.73
YIF1A-201ENST00000359461 NLGN2Q8NFZ4 835 aa32.08■■■□□ 2.73
YIF1A-201ENST00000359461 HMGB2P26583 209 aaKnown RBP32.03■■■□□ 2.72
YIF1A-201ENST00000359461 MPRIPQ6WCQ1 1025 aa32.02■■■□□ 2.72
YIF1A-201ENST00000359461 TIMELESSQ9UNS1 1208 aa32.02■■■□□ 2.72
YIF1A-201ENST00000359461 WASHC2AQ641Q2 1341 aa32■■■□□ 2.71
YIF1A-201ENST00000359461 MSH5O43196 834 aa32■■■□□ 2.71
YIF1A-201ENST00000359461 NKX1-1Q15270 411 aaPredicted RBP32■■■□□ 2.71
YIF1A-201ENST00000359461 FLAD1Q8NFF5 587 aa31.99■■■□□ 2.71
YIF1A-201ENST00000359461 SMARCC1Q92922 1105 aaPredicted RBP31.98■■■□□ 2.71
YIF1A-201ENST00000359461 MSL1Q68DK7 614 aa31.97■■■□□ 2.71
YIF1A-201ENST00000359461 PELP1Q8IZL8 1130 aaKnown RBP31.97■■■□□ 2.71
YIF1A-201ENST00000359461 YBX3P16989 372 aaKnown RBP eCLIP31.96■■■□□ 2.713e-6■□□□□ 9.9
YIF1A-201ENST00000359461 PIGBQ92521 554 aa31.95■■■□□ 2.71
YIF1A-201ENST00000359461 PLEKHG2Q9H7P9 1386 aa31.94■■■□□ 2.7
YIF1A-201ENST00000359461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.94■■■□□ 2.7
YIF1A-201ENST00000359461 SPG7Q9UQ90 795 aa31.94■■■□□ 2.7
YIF1A-201ENST00000359461 PPM1GO15355 546 aaPredicted RBP31.93■■■□□ 2.7
YIF1A-201ENST00000359461 C1QTNF8P60827 252 aa31.93■■■□□ 2.7
YIF1A-201ENST00000359461 AMIGO3Q86WK7 504 aa31.93■■■□□ 2.7
YIF1A-201ENST00000359461 EYA1Q99502 592 aa31.93■■■□□ 2.7
YIF1A-201ENST00000359461 CLSPNQ9HAW4 1339 aa31.92■■■□□ 2.7
YIF1A-201ENST00000359461 POLKQ9UBT6 870 aa31.91■■■□□ 2.7
YIF1A-201ENST00000359461 CD2APQ9Y5K6 639 aa31.91■■■□□ 2.7
YIF1A-201ENST00000359461 ZNF831Q5JPB2 1677 aa31.9■■■□□ 2.7
YIF1A-201ENST00000359461 GRIN3BO60391 1043 aa31.9■■■□□ 2.7
YIF1A-201ENST00000359461 AK7Q96M32 723 aa31.9■■■□□ 2.7
YIF1A-201ENST00000359461 LOC102724428A0A0B4J2F2 783 aa31.86■■■□□ 2.69
YIF1A-201ENST00000359461 SIK1P57059 783 aa31.86■■■□□ 2.69
YIF1A-201ENST00000359461 PHKG2P15735 406 aa31.85■■■□□ 2.69
YIF1A-201ENST00000359461 LINC00116Q8NCU8 138 aa31.85■■■□□ 2.69
YIF1A-201ENST00000359461 SSFA2P28290 1259 aa31.84■■■□□ 2.69
YIF1A-201ENST00000359461 TMOD3Q9NYL9 352 aa31.84■■■□□ 2.69
YIF1A-201ENST00000359461 COL5A3P25940 1745 aaPredicted RBP31.83■■■□□ 2.69
YIF1A-201ENST00000359461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.83■■■□□ 2.69
YIF1A-201ENST00000359461 EIF4A2Q14240 407 aaKnown RBP31.83■■■□□ 2.69
YIF1A-201ENST00000359461 IFNL2Q8IZJ0 200 aa31.83■■■□□ 2.69
YIF1A-201ENST00000359461 SENP3-EIF4A1A0A087X0R7 540 aa31.82■■■□□ 2.68
YIF1A-201ENST00000359461 GIGYF1O75420 1035 aaPredicted RBP31.82■■■□□ 2.68
YIF1A-201ENST00000359461 KIF13BQ9NQT8 1826 aa31.82■■■□□ 2.68
YIF1A-201ENST00000359461 KDRP35968 1356 aa31.81■■■□□ 2.68
YIF1A-201ENST00000359461 ASAP1Q9ULH1 1129 aa31.81■■■□□ 2.68
YIF1A-201ENST00000359461 IGSF1Q8N6C5 1336 aa31.8■■■□□ 2.68
YIF1A-201ENST00000359461 PHF14O94880 888 aa31.8■■■□□ 2.68
YIF1A-201ENST00000359461 ITPK1Q13572 414 aa31.8■■■□□ 2.68
YIF1A-201ENST00000359461 SMIM5Q71RC9 77 aa31.8■■■□□ 2.68
YIF1A-201ENST00000359461 KIAA1551Q9HCM1 1747 aa31.78■■■□□ 2.68
YIF1A-201ENST00000359461 ADCY9O60503 1353 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms