RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 POTEAQ6S8J7 498 aa20.27■□□□□ 0.83
TPM1-206ENST00000358278 FAM9BQ8IZU0 186 aa20.27■□□□□ 0.83
TPM1-206ENST00000358278 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.83
TPM1-206ENST00000358278 ADAMTS8Q9UP79 889 aa20.27■□□□□ 0.83
TPM1-206ENST00000358278 RXRBP28702 533 aa20.26■□□□□ 0.83
TPM1-206ENST00000358278 PRKAR2BP31323 418 aa20.26■□□□□ 0.83
TPM1-206ENST00000358278 CDCA7Q9BWT1 371 aaPredicted RBP20.26■□□□□ 0.83
TPM1-206ENST00000358278 VIRMAQ69YN4 1812 aaKnown RBP20.26■□□□□ 0.83
TPM1-206ENST00000358278 OVOS2A0A0G2JMS6 1433 aa20.26■□□□□ 0.83
TPM1-206ENST00000358278 DLG5Q8TDM6 1919 aa20.25■□□□□ 0.83
TPM1-206ENST00000358278 PNNQ9H307 717 aaKnown RBP20.25■□□□□ 0.83
TPM1-206ENST00000358278 NEFMP07197 916 aa20.24■□□□□ 0.83
TPM1-206ENST00000358278 KAT6BQ8WYB5 2073 aa20.24■□□□□ 0.83
TPM1-206ENST00000358278 PLEKHG2Q9H7P9 1386 aa20.23■□□□□ 0.83
TPM1-206ENST00000358278 MAPK8IP3Q9UPT6 1336 aa20.23■□□□□ 0.83
TPM1-206ENST00000358278 TNS2Q63HR2 1409 aa20.22■□□□□ 0.83
TPM1-206ENST00000358278 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
TPM1-206ENST00000358278 DDB1Q16531 1140 aa20.21■□□□□ 0.83
TPM1-206ENST00000358278 EP400Q96L91 3159 aa20.2■□□□□ 0.82
TPM1-206ENST00000358278 EXOC5O00471 708 aa20.19■□□□□ 0.82
TPM1-206ENST00000358278 ONECUT3O60422 494 aaPredicted RBP20.19■□□□□ 0.82
TPM1-206ENST00000358278 PLEKHO1Q53GL0 409 aaPredicted RBP20.19■□□□□ 0.82
TPM1-206ENST00000358278 SEPT12Q8IYM1 358 aa20.19■□□□□ 0.82
TPM1-206ENST00000358278 ZCRB1Q8TBF4 217 aaKnown RBP20.19■□□□□ 0.82
TPM1-206ENST00000358278 SPG7Q9UQ90 795 aa20.19■□□□□ 0.82
TPM1-206ENST00000358278 RGS12O14924 1447 aa20.19■□□□□ 0.82
TPM1-206ENST00000358278 AMOTQ4VCS5 1084 aa20.19■□□□□ 0.82
TPM1-206ENST00000358278 PLEKHF1Q96S99 279 aa20.19■□□□□ 0.82
TPM1-206ENST00000358278 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
TPM1-206ENST00000358278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.18■□□□□ 0.825e-8■■■■□ 19.9
TPM1-206ENST00000358278 PCDH11XQ9BZA7 1347 aa20.18■□□□□ 0.82
TPM1-206ENST00000358278 PCDH11YQ9BZA8 1340 aa20.18■□□□□ 0.82
TPM1-206ENST00000358278 PHACTR3Q96KR7 559 aa20.17■□□□□ 0.82
TPM1-206ENST00000358278 PDE3BQ13370 1112 aa20.16■□□□□ 0.82
TPM1-206ENST00000358278 ZNF530Q6P9A1 599 aaPredicted RBP20.16■□□□□ 0.82
TPM1-206ENST00000358278 MTHFSDQ2M296 383 aaKnown RBP20.15■□□□□ 0.82
TPM1-206ENST00000358278 GAS2L2Q8NHY3 880 aa20.15■□□□□ 0.82
TPM1-206ENST00000358278 DDX54Q8TDD1 881 aaKnown RBP20.15■□□□□ 0.82
TPM1-206ENST00000358278 SCN11AQ9UI33 1791 aa20.15■□□□□ 0.82
TPM1-206ENST00000358278 C1orf141Q5JVX7 400 aa20.14■□□□□ 0.81
TPM1-206ENST00000358278 DOT1LQ8TEK3 1739 aa20.13■□□□□ 0.81
TPM1-206ENST00000358278 IFNL2Q8IZJ0 200 aa20.12■□□□□ 0.81
TPM1-206ENST00000358278 SBF2Q86WG5 1849 aa20.12■□□□□ 0.81
TPM1-206ENST00000358278 APAF1O14727 1248 aa20.11■□□□□ 0.81
TPM1-206ENST00000358278 CYP27B1O15528 508 aa20.11■□□□□ 0.81
TPM1-206ENST00000358278 NFE2L2Q16236 605 aa20.11■□□□□ 0.81
TPM1-206ENST00000358278 ITGB4P16144 1822 aa20.11■□□□□ 0.81
TPM1-206ENST00000358278 PHKG2P15735 406 aa20.1■□□□□ 0.81
TPM1-206ENST00000358278 KRT27Q7Z3Y8 459 aa20.1■□□□□ 0.81
TPM1-206ENST00000358278 MAP3K5Q99683 1374 aa20.1■□□□□ 0.81
TPM1-206ENST00000358278 TOGARAM1Q9Y4F4 1720 aa20.1■□□□□ 0.81
TPM1-206ENST00000358278 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
TPM1-206ENST00000358278 AKAP4Q5JQC9 854 aa20.1■□□□□ 0.81
TPM1-206ENST00000358278 RRP7AQ9Y3A4 280 aaKnown RBP20.1■□□□□ 0.81
TPM1-206ENST00000358278 TMPOP42166 694 aaKnown RBP20.09■□□□□ 0.81
TPM1-206ENST00000358278 MARCH10Q8NA82 808 aaPredicted RBP20.09■□□□□ 0.81
TPM1-206ENST00000358278 GNAT3A8MTJ3 354 aa20.08■□□□□ 0.81
TPM1-206ENST00000358278 ADAMTS7Q9UKP4 1686 aa20.08■□□□□ 0.81
TPM1-206ENST00000358278 SENP3-EIF4A1A0A087X0R7 540 aa20.07■□□□□ 0.8
TPM1-206ENST00000358278 HSP90AB1P08238 724 aaKnown RBP20.07■□□□□ 0.8
TPM1-206ENST00000358278 RIPK4P57078 832 aa20.07■□□□□ 0.8
TPM1-206ENST00000358278 FAM182BQ5T319 152 aa20.06■□□□□ 0.8
TPM1-206ENST00000358278 RTF1Q92541 710 aaKnown RBP20.06■□□□□ 0.8
TPM1-206ENST00000358278 MPRIPQ6WCQ1 1025 aa20.05■□□□□ 0.8
TPM1-206ENST00000358278 NHSQ6T4R5 1651 aa20.05■□□□□ 0.8
TPM1-206ENST00000358278 LMOD3Q0VAK6 560 aa20.05■□□□□ 0.8
TPM1-206ENST00000358278 DCAF5Q96JK2 942 aa20.05■□□□□ 0.8
TPM1-206ENST00000358278 KDM6AO15550 1401 aaPredicted RBP20.04■□□□□ 0.8
TPM1-206ENST00000358278 SIPA1L3O60292 1781 aaPredicted RBP20.04■□□□□ 0.8
TPM1-206ENST00000358278 NKX1-1Q15270 411 aaPredicted RBP20.04■□□□□ 0.8
TPM1-206ENST00000358278 SALL2Q9Y467 1007 aaPredicted RBP20.03■□□□□ 0.8
TPM1-206ENST00000358278 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
TPM1-206ENST00000358278 BCL9O00512 1426 aa20.01■□□□□ 0.79
TPM1-206ENST00000358278 RNMTO43148 476 aaKnown RBP20.01■□□□□ 0.79
TPM1-206ENST00000358278 DCTN1Q14203 1278 aa20.01■□□□□ 0.79
TPM1-206ENST00000358278 FAM196AQ6ZSG2 479 aa20.01■□□□□ 0.79
TPM1-206ENST00000358278 MCM10Q7L590 875 aa20.01■□□□□ 0.79
TPM1-206ENST00000358278 BTAF1O14981 1849 aa20■□□□□ 0.79
TPM1-206ENST00000358278 HNRNPUQ00839 825 aaKnown RBP eCLIP20■□□□□ 0.79
TPM1-206ENST00000358278 LGR6Q9HBX8 967 aa20■□□□□ 0.79
TPM1-206ENST00000358278 NGEFQ8N5V2 710 aa19.99■□□□□ 0.79
TPM1-206ENST00000358278 SYTL4Q96C24 671 aaPredicted RBP19.99■□□□□ 0.79
TPM1-206ENST00000358278 ACSBG1Q96GR2 724 aa19.99■□□□□ 0.79
TPM1-206ENST00000358278 TRIM35Q9UPQ4 493 aa19.99■□□□□ 0.79
TPM1-206ENST00000358278 MRC1P22897 1456 aa19.99■□□□□ 0.79
TPM1-206ENST00000358278 IL17REQ8NFR9 667 aa19.99■□□□□ 0.79
TPM1-206ENST00000358278 CEMIPQ8WUJ3 1361 aa19.99■□□□□ 0.79
TPM1-206ENST00000358278 TEFQ10587 303 aa19.98■□□□□ 0.79
TPM1-206ENST00000358278 ERVV-2B6SEH9 535 aa19.97■□□□□ 0.79
TPM1-206ENST00000358278 CABP4P57796 275 aa19.97■□□□□ 0.79
TPM1-206ENST00000358278 CCDC27Q2M243 656 aa19.97■□□□□ 0.79
TPM1-206ENST00000358278 NCBP3Q53F19 620 aaKnown RBP19.97■□□□□ 0.79
TPM1-206ENST00000358278 THUMPD2Q9BTF0 503 aaKnown RBP19.97■□□□□ 0.79
TPM1-206ENST00000358278 TMOD3Q9NYL9 352 aa19.96■□□□□ 0.79
TPM1-206ENST00000358278 TNS1Q9HBL0 1735 aaKnown RBP19.96■□□□□ 0.79
TPM1-206ENST00000358278 PRIM1P49642 420 aaKnown RBP19.96■□□□□ 0.79
TPM1-206ENST00000358278 WWC1Q8IX03 1113 aa19.96■□□□□ 0.79
TPM1-206ENST00000358278 SLC52A2Q9HAB3 445 aa19.96■□□□□ 0.79
TPM1-206ENST00000358278 KDM3BQ7LBC6 1761 aa19.95■□□□□ 0.78
TPM1-206ENST00000358278 PAPPAQ13219 1627 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms