RNA–Protein interactions for RNA: ENST00000357985.6

FAM3B-201, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM3B, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-201ENST00000357985 FHDC1Q9C0D6 1143 aaPredicted RBP18.7■□□□□ 0.58
FAM3B-201ENST00000357985 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
FAM3B-201ENST00000357985 PKD1L3Q7Z443 1732 aa18.69■□□□□ 0.58
FAM3B-201ENST00000357985 CDCA8Q53HL2 280 aa18.69■□□□□ 0.58
FAM3B-201ENST00000357985 SYTL4Q96C24 671 aaPredicted RBP18.69■□□□□ 0.58
FAM3B-201ENST00000357985 LRRC4BQ9NT99 713 aa18.69■□□□□ 0.58
FAM3B-201ENST00000357985 NSD2O96028 1365 aa18.68■□□□□ 0.58
FAM3B-201ENST00000357985 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
FAM3B-201ENST00000357985 CGNL1Q0VF96 1302 aa18.68■□□□□ 0.58
FAM3B-201ENST00000357985 KIF24Q5T7B8 1368 aa18.68■□□□□ 0.58
FAM3B-201ENST00000357985 TAF1LQ8IZX4 1826 aa18.67■□□□□ 0.58
FAM3B-201ENST00000357985 RRS1Q15050 365 aaKnown RBP18.67■□□□□ 0.58
FAM3B-201ENST00000357985 ARXQ96QS3 562 aa18.67■□□□□ 0.58
FAM3B-201ENST00000357985 SYT17Q9BSW7 474 aa18.67■□□□□ 0.58
FAM3B-201ENST00000357985 GGNBP2Q9H3C7 697 aa18.67■□□□□ 0.58
FAM3B-201ENST00000357985 ITGB4P16144 1822 aa18.67■□□□□ 0.58
FAM3B-201ENST00000357985 FLT4P35916 1363 aa18.67■□□□□ 0.58
FAM3B-201ENST00000357985 FYB1O15117 783 aa18.66■□□□□ 0.58
FAM3B-201ENST00000357985 FBLN1P23142 703 aa18.66■□□□□ 0.58
FAM3B-201ENST00000357985 TRIM26Q12899 539 aaPredicted RBP18.66■□□□□ 0.58
FAM3B-201ENST00000357985 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
FAM3B-201ENST00000357985 INSRP06213 1382 aa18.66■□□□□ 0.58
FAM3B-201ENST00000357985 TOGARAM1Q9Y4F4 1720 aa18.66■□□□□ 0.58
FAM3B-201ENST00000357985 PRIM1P49642 420 aaKnown RBP18.65■□□□□ 0.58
FAM3B-201ENST00000357985 SLC16A10Q8TF71 515 aa18.65■□□□□ 0.58
FAM3B-201ENST00000357985 RAPGEF4Q8WZA2 1011 aa18.65■□□□□ 0.58
FAM3B-201ENST00000357985 MAP2P11137 1827 aaKnown RBP18.64■□□□□ 0.57
FAM3B-201ENST00000357985 NSD3Q9BZ95 1437 aa18.64■□□□□ 0.57
FAM3B-201ENST00000357985 PNPLA7Q6ZV29 1317 aa18.63■□□□□ 0.57
FAM3B-201ENST00000357985 PCDH11XQ9BZA7 1347 aa18.63■□□□□ 0.57
FAM3B-201ENST00000357985 PCDH11YQ9BZA8 1340 aa18.63■□□□□ 0.57
FAM3B-201ENST00000357985 TATP17735 454 aaPredicted RBP18.62■□□□□ 0.57
FAM3B-201ENST00000357985 POLD1P28340 1107 aa18.62■□□□□ 0.57
FAM3B-201ENST00000357985 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
FAM3B-201ENST00000357985 USHBP1Q8N6Y0 703 aa18.62■□□□□ 0.57
FAM3B-201ENST00000357985 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
FAM3B-201ENST00000357985 TFCP2L1Q9NZI6 479 aa18.62■□□□□ 0.57
FAM3B-201ENST00000357985 CCNL1Q9UK58 526 aaPredicted RBP18.61■□□□□ 0.57
FAM3B-201ENST00000357985 NCAPD2Q15021 1401 aa18.58■□□□□ 0.57
FAM3B-201ENST00000357985 KCNQ4P56696 695 aa18.58■□□□□ 0.56
FAM3B-201ENST00000357985 HSP90AB2PQ58FF8 381 aa18.58■□□□□ 0.56
FAM3B-201ENST00000357985 KLHL34Q8N239 644 aa18.58■□□□□ 0.56
FAM3B-201ENST00000357985 C4BP0C0L5 1744 aa18.57■□□□□ 0.56
FAM3B-201ENST00000357985 HMGB2P26583 209 aaKnown RBP18.56■□□□□ 0.56
FAM3B-201ENST00000357985 UBR3Q6ZT12 1888 aa18.56■□□□□ 0.56
FAM3B-201ENST00000357985 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
FAM3B-201ENST00000357985 TIMELESSQ9UNS1 1208 aa18.55■□□□□ 0.56
FAM3B-201ENST00000357985 ZNF784Q8NCA9 323 aaPredicted RBP18.54■□□□□ 0.56
FAM3B-201ENST00000357985 EMILIN1Q9Y6C2 1016 aa18.54■□□□□ 0.56
FAM3B-201ENST00000357985 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
FAM3B-201ENST00000357985 MSH5O43196 834 aa18.53■□□□□ 0.56
FAM3B-201ENST00000357985 GPR162Q16538 588 aa18.53■□□□□ 0.56
FAM3B-201ENST00000357985 CARD14Q9BXL6 1004 aa18.53■□□□□ 0.56
FAM3B-201ENST00000357985 PPM1GO15355 546 aaPredicted RBP18.5■□□□□ 0.55
FAM3B-201ENST00000357985 CYP27B1O15528 508 aa18.5■□□□□ 0.55
FAM3B-201ENST00000357985 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
FAM3B-201ENST00000357985 MPRIPQ6WCQ1 1025 aa18.49■□□□□ 0.55
FAM3B-201ENST00000357985 COL23A1Q86Y22 540 aaPredicted RBP18.49■□□□□ 0.55
FAM3B-201ENST00000357985 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
FAM3B-201ENST00000357985 FLAD1Q8NFF5 587 aa18.49■□□□□ 0.55
FAM3B-201ENST00000357985 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
FAM3B-201ENST00000357985 PLEKHG2Q9H7P9 1386 aa18.48■□□□□ 0.55
FAM3B-201ENST00000357985 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
FAM3B-201ENST00000357985 UTRNP46939 3433 aa18.48■□□□□ 0.55
FAM3B-201ENST00000357985 NLGN2Q8NFZ4 835 aa18.47■□□□□ 0.55
FAM3B-201ENST00000357985 MSL1Q68DK7 614 aa18.46■□□□□ 0.55
FAM3B-201ENST00000357985 AK7Q96M32 723 aa18.46■□□□□ 0.55
FAM3B-201ENST00000357985 ZNF831Q5JPB2 1677 aa18.45■□□□□ 0.54
FAM3B-201ENST00000357985 POLR3GLQ9BT43 218 aa18.45■□□□□ 0.54
FAM3B-201ENST00000357985 NKX1-1Q15270 411 aaPredicted RBP18.44■□□□□ 0.54
FAM3B-201ENST00000357985 EYA1Q99502 592 aa18.44■□□□□ 0.54
FAM3B-201ENST00000357985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.44■□□□□ 0.547e-6■■□□□ 12.8
FAM3B-201ENST00000357985 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
FAM3B-201ENST00000357985 COL5A3P25940 1745 aaPredicted RBP18.43■□□□□ 0.54
FAM3B-201ENST00000357985 GRIN3BO60391 1043 aa18.42■□□□□ 0.54
FAM3B-201ENST00000357985 PIGBQ92521 554 aa18.42■□□□□ 0.54
FAM3B-201ENST00000357985 TMOD3Q9NYL9 352 aa18.42■□□□□ 0.54
FAM3B-201ENST00000357985 IFNL2Q8IZJ0 200 aa18.41■□□□□ 0.54
FAM3B-201ENST00000357985 LOC102724428A0A0B4J2F2 783 aa18.4■□□□□ 0.54
FAM3B-201ENST00000357985 PHKG2P15735 406 aa18.4■□□□□ 0.54
FAM3B-201ENST00000357985 SIK1P57059 783 aa18.4■□□□□ 0.54
FAM3B-201ENST00000357985 PCGF6Q9BYE7 350 aa18.4■□□□□ 0.54
FAM3B-201ENST00000357985 CD2APQ9Y5K6 639 aa18.4■□□□□ 0.54
FAM3B-201ENST00000357985 PHF14O94880 888 aa18.39■□□□□ 0.53
FAM3B-201ENST00000357985 SSFA2P28290 1259 aa18.39■□□□□ 0.53
FAM3B-201ENST00000357985 EIF4G2P78344 907 aaKnown RBP eCLIP18.39■□□□□ 0.53
FAM3B-201ENST00000357985 EIF4A2Q14240 407 aaKnown RBP18.39■□□□□ 0.53
FAM3B-201ENST00000357985 KIF13BQ9NQT8 1826 aa18.39■□□□□ 0.53
FAM3B-201ENST00000357985 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.38■□□□□ 0.53
FAM3B-201ENST00000357985 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
FAM3B-201ENST00000357985 TNNT2P45379 298 aaPredicted RBP18.38■□□□□ 0.53
FAM3B-201ENST00000357985 IGSF1Q8N6C5 1336 aa18.38■□□□□ 0.53
FAM3B-201ENST00000357985 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
FAM3B-201ENST00000357985 GIGYF1O75420 1035 aaPredicted RBP18.37■□□□□ 0.53
FAM3B-201ENST00000357985 C1QTNF8P60827 252 aa18.37■□□□□ 0.53
FAM3B-201ENST00000357985 KDRP35968 1356 aa18.37■□□□□ 0.53
FAM3B-201ENST00000357985 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
FAM3B-201ENST00000357985 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
FAM3B-201ENST00000357985 SCN11AQ9UI33 1791 aa18.35■□□□□ 0.53
FAM3B-201ENST00000357985 CICQ96RK0 1608 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms