RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
RNF40-202ENST00000357890 TSPYL6Q8N831 410 aa12.14□□□□□ -0.47
RNF40-202ENST00000357890 ARHGAP45Q92619 1136 aa12.14□□□□□ -0.47
RNF40-202ENST00000357890 CIZ1Q9ULV3 898 aaPredicted RBP12.14□□□□□ -0.47
RNF40-202ENST00000357890 HMMRO75330 724 aa12.13□□□□□ -0.47
RNF40-202ENST00000357890 BAG4O95429 457 aaKnown RBP12.13□□□□□ -0.47
RNF40-202ENST00000357890 INTS3Q68E01 1043 aaKnown RBP12.13□□□□□ -0.47
RNF40-202ENST00000357890 C14orf37Q86TY3 774 aa12.13□□□□□ -0.47
RNF40-202ENST00000357890 TRERF1Q96PN7 1200 aa12.13□□□□□ -0.47
RNF40-202ENST00000357890 VAMP4O75379 141 aa12.13□□□□□ -0.47
RNF40-202ENST00000357890 CHMP3Q9Y3E7 222 aa12.13□□□□□ -0.47
RNF40-202ENST00000357890 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
RNF40-202ENST00000357890 FAM83GA6ND36 823 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
RNF40-202ENST00000357890 SMAP1Q8IYB5 467 aaPredicted RBP12.12□□□□□ -0.47
RNF40-202ENST00000357890 PDCL2Q8N4E4 241 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 PPLO60437 1756 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 SPC24Q8NBT2 197 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 RILPL2Q969X0 211 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 FGD1P98174 961 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 ZSCAN23Q3MJ62 389 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
RNF40-202ENST00000357890 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 KIF3AQ9Y496 699 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 NEXMIFQ5QGS0 1516 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 RICTORQ6R327 1708 aa12.12□□□□□ -0.47
RNF40-202ENST00000357890 FRMPD1Q5SYB0 1578 aa12.11□□□□□ -0.47
RNF40-202ENST00000357890 REC8O95072 547 aa12.11□□□□□ -0.47
RNF40-202ENST00000357890 MCCP23508 829 aa12.11□□□□□ -0.47
RNF40-202ENST00000357890 AGLP35573 1532 aa12.11□□□□□ -0.47
RNF40-202ENST00000357890 ERICH4A6NGS2 130 aa12.11□□□□□ -0.47
RNF40-202ENST00000357890 CAMSAP1Q5T5Y3 1602 aa12.11□□□□□ -0.47
RNF40-202ENST00000357890 RABEP1Q15276 862 aa12.11□□□□□ -0.47
RNF40-202ENST00000357890 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
RNF40-202ENST00000357890 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
RNF40-202ENST00000357890 ZKSCAN5Q9Y2L8 839 aa12.1□□□□□ -0.47
RNF40-202ENST00000357890 IFT172Q9UG01 1749 aa12.1□□□□□ -0.47
RNF40-202ENST00000357890 SMARCA5O60264 1052 aaPredicted RBP12.1□□□□□ -0.47
RNF40-202ENST00000357890 HMGN5P82970 282 aaKnown RBP12.1□□□□□ -0.47
RNF40-202ENST00000357890 KLHL40Q2TBA0 621 aa12.1□□□□□ -0.47
RNF40-202ENST00000357890 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
RNF40-202ENST00000357890 RBSNQ9H1K0 784 aa12.1□□□□□ -0.47
RNF40-202ENST00000357890 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
RNF40-202ENST00000357890 PPIP5K1Q6PFW1 1433 aa12.1□□□□□ -0.47
RNF40-202ENST00000357890 NPHP1O15259 732 aa12.09□□□□□ -0.47
RNF40-202ENST00000357890 GAS2L2Q8NHY3 880 aa12.09□□□□□ -0.47
RNF40-202ENST00000357890 CCDC94Q9BW85 323 aaPredicted RBP12.09□□□□□ -0.47
RNF40-202ENST00000357890 KIF13AQ9H1H9 1805 aa12.09□□□□□ -0.47
RNF40-202ENST00000357890 TSPY26PQ9H489 355 aa12.09□□□□□ -0.47
RNF40-202ENST00000357890 CHMP4AQ9BY43 222 aa12.09□□□□□ -0.47
RNF40-202ENST00000357890 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
RNF40-202ENST00000357890 IL13P35225 146 aa12.09□□□□□ -0.47
RNF40-202ENST00000357890 RBM25P49756 843 aaKnown RBP12.09□□□□□ -0.47
RNF40-202ENST00000357890 C17orf53Q8N3J3 647 aaPredicted RBP12.09□□□□□ -0.47
RNF40-202ENST00000357890 C8orf58Q8NAV2 365 aa12.09□□□□□ -0.47
RNF40-202ENST00000357890 SNX21Q969T3 373 aa12.09□□□□□ -0.47
RNF40-202ENST00000357890 NEK4P51957 841 aa12.08□□□□□ -0.47
RNF40-202ENST00000357890 C16orf71Q8IYS4 520 aaPredicted RBP12.08□□□□□ -0.47
RNF40-202ENST00000357890 EID1Q9Y6B2 187 aa12.08□□□□□ -0.47
RNF40-202ENST00000357890 USP32Q8NFA0 1604 aa12.08□□□□□ -0.48
RNF40-202ENST00000357890 ARHGEF40Q8TER5 1519 aa12.08□□□□□ -0.48
RNF40-202ENST00000357890 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
RNF40-202ENST00000357890 RAB3GAP1Q15042 981 aa12.08□□□□□ -0.48
RNF40-202ENST00000357890 NGDNQ8NEJ9 315 aaKnown RBP12.08□□□□□ -0.48
RNF40-202ENST00000357890 JARID2Q92833 1246 aaPredicted RBP12.08□□□□□ -0.48
RNF40-202ENST00000357890 ANO2Q9NQ90 1003 aa12.08□□□□□ -0.48
RNF40-202ENST00000357890 PHF14O94880 888 aa12.08□□□□□ -0.48
RNF40-202ENST00000357890 AMPHP49418 695 aa12.08□□□□□ -0.48
RNF40-202ENST00000357890 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
RNF40-202ENST00000357890 MED14O60244 1454 aa12.08□□□□□ -0.48
RNF40-202ENST00000357890 PNPLA6Q8IY17 1366 aa12.08□□□□□ -0.48
RNF40-202ENST00000357890 MCM10Q7L590 875 aa12.07□□□□□ -0.48
RNF40-202ENST00000357890 USP25Q9UHP3 1055 aa12.07□□□□□ -0.48
RNF40-202ENST00000357890 SHPRHQ149N8 1683 aa12.07□□□□□ -0.48
RNF40-202ENST00000357890 AEBP1Q8IUX7 1158 aa12.07□□□□□ -0.48
RNF40-202ENST00000357890 GDPD2Q9HCC8 539 aa12.07□□□□□ -0.48
RNF40-202ENST00000357890 GOLGA6L4A6NEF3 574 aa12.07□□□□□ -0.48
RNF40-202ENST00000357890 TTC12Q9H892 705 aaPredicted RBP12.07□□□□□ -0.48
RNF40-202ENST00000357890 EDC4Q6P2E9 1401 aaKnown RBP12.07□□□□□ -0.48
RNF40-202ENST00000357890 OS9Q13438 667 aaPredicted RBP12.06□□□□□ -0.48
RNF40-202ENST00000357890 PTPRMP28827 1452 aa12.06□□□□□ -0.48
RNF40-202ENST00000357890 ZC3H13Q5T200 1668 aaKnown RBP12.06□□□□□ -0.48
RNF40-202ENST00000357890 BRPF1P55201 1214 aaPredicted RBP12.06□□□□□ -0.48
RNF40-202ENST00000357890 DIAPH3Q9NSV4 1193 aa12.06□□□□□ -0.48
RNF40-202ENST00000357890 RPAP2Q8IXW5 612 aaPredicted RBP12.06□□□□□ -0.48
RNF40-202ENST00000357890 CHAMP1Q96JM3 812 aa12.06□□□□□ -0.48
RNF40-202ENST00000357890 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
RNF40-202ENST00000357890 NOL7Q9UMY1 257 aaKnown RBP12.06□□□□□ -0.48
RNF40-202ENST00000357890 FKBP5Q13451 457 aaPredicted RBP12.05□□□□□ -0.48
RNF40-202ENST00000357890 KRT24Q2M2I5 525 aa12.05□□□□□ -0.48
RNF40-202ENST00000357890 NAP1L2Q9ULW6 460 aaPredicted RBP12.05□□□□□ -0.48
RNF40-202ENST00000357890 TNRQ92752 1358 aa12.05□□□□□ -0.48
RNF40-202ENST00000357890 NCKAP5LQ9HCH0 1330 aa12.05□□□□□ -0.48
RNF40-202ENST00000357890 REREQ9P2R6 1566 aa12.05□□□□□ -0.48
RNF40-202ENST00000357890 KCNJ4P48050 445 aa12.05□□□□□ -0.48
RNF40-202ENST00000357890 LTV1Q96GA3 475 aaPredicted RBP12.05□□□□□ -0.48
RNF40-202ENST00000357890 CD2BP2O95400 341 aaKnown RBP12.05□□□□□ -0.48
RNF40-202ENST00000357890 GOLGA6L6A8MZA4 724 aa12.05□□□□□ -0.48
RNF40-202ENST00000357890 ATP7BP35670 1465 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms