RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 ZNF827Q17R98 1081 aa12.19□□□□□ -0.46
COL4A3BP-202ENST00000357457 SLC27A3Q5K4L6 730 aa12.19□□□□□ -0.46
COL4A3BP-202ENST00000357457 SLC16A10Q8TF71 515 aa12.19□□□□□ -0.46
COL4A3BP-202ENST00000357457 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
COL4A3BP-202ENST00000357457 TERF2IPQ9NYB0 399 aa12.19□□□□□ -0.46
COL4A3BP-202ENST00000357457 COL24A1Q17RW2 1714 aa12.18□□□□□ -0.46
COL4A3BP-202ENST00000357457 CAPN15O75808 1086 aa12.18□□□□□ -0.46
COL4A3BP-202ENST00000357457 ZNF219Q9P2Y4 722 aaPredicted RBP12.18□□□□□ -0.46
COL4A3BP-202ENST00000357457 QSER1Q2KHR3 1735 aa12.17□□□□□ -0.46
COL4A3BP-202ENST00000357457 A0A1W2PP64 1363 aa12.17□□□□□ -0.46
COL4A3BP-202ENST00000357457 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
COL4A3BP-202ENST00000357457 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
COL4A3BP-202ENST00000357457 FAM208AQ9UK61 1670 aaKnown RBP12.15□□□□□ -0.46
COL4A3BP-202ENST00000357457 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
COL4A3BP-202ENST00000357457 PRIM1P49642 420 aaKnown RBP12.14□□□□□ -0.47
COL4A3BP-202ENST00000357457 TESK2Q96S53 571 aa12.14□□□□□ -0.47
COL4A3BP-202ENST00000357457 ANKRD36BQ8N2N9 1353 aa12.14□□□□□ -0.47
COL4A3BP-202ENST00000357457 MAP3K19Q56UN5 1328 aa12.13□□□□□ -0.47
COL4A3BP-202ENST00000357457 HOXC9P31274 260 aa12.13□□□□□ -0.47
COL4A3BP-202ENST00000357457 LY75O60449 1722 aa12.13□□□□□ -0.47
COL4A3BP-202ENST00000357457 TUBGCP6Q96RT7 1819 aa12.12□□□□□ -0.47
COL4A3BP-202ENST00000357457 FBLN1P23142 703 aa12.12□□□□□ -0.47
COL4A3BP-202ENST00000357457 POLD1P28340 1107 aa12.12□□□□□ -0.47
COL4A3BP-202ENST00000357457 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
COL4A3BP-202ENST00000357457 ZCRB1Q8TBF4 217 aaKnown RBP12.12□□□□□ -0.47
COL4A3BP-202ENST00000357457 LTV1Q96GA3 475 aaPredicted RBP12.12□□□□□ -0.47
COL4A3BP-202ENST00000357457 COG3Q96JB2 828 aa12.12□□□□□ -0.47
COL4A3BP-202ENST00000357457 NSD2O96028 1365 aa12.12□□□□□ -0.47
COL4A3BP-202ENST00000357457 RGPD2P0DJD1 1756 aa12.12□□□□□ -0.47
COL4A3BP-202ENST00000357457 SHANK3Q9BYB0 1731 aa12.11□□□□□ -0.47
COL4A3BP-202ENST00000357457 ST20-MTHFSA0A0A6YYL1 179 aa12.11□□□□□ -0.47
COL4A3BP-202ENST00000357457 KCNQ4P56696 695 aa12.11□□□□□ -0.47
COL4A3BP-202ENST00000357457 GPR162Q16538 588 aa12.11□□□□□ -0.47
COL4A3BP-202ENST00000357457 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
COL4A3BP-202ENST00000357457 CEP350Q5VT06 3117 aa12.11□□□□□ -0.47
COL4A3BP-202ENST00000357457 DSG3P32926 999 aa12.1□□□□□ -0.47
COL4A3BP-202ENST00000357457 AMPHP49418 695 aa12.1□□□□□ -0.47
COL4A3BP-202ENST00000357457 SYTL4Q96C24 671 aaPredicted RBP12.1□□□□□ -0.47
COL4A3BP-202ENST00000357457 CGNL1Q0VF96 1302 aa12.1□□□□□ -0.47
COL4A3BP-202ENST00000357457 NBPF6Q5VWK0 638 aa12.09□□□□□ -0.47
COL4A3BP-202ENST00000357457 NBPF4Q96M43 638 aa12.09□□□□□ -0.47
COL4A3BP-202ENST00000357457 DOT1LQ8TEK3 1739 aa12.08□□□□□ -0.47
COL4A3BP-202ENST00000357457 MEGF6O75095 1541 aa12.08□□□□□ -0.48
COL4A3BP-202ENST00000357457 FYB1O15117 783 aa12.08□□□□□ -0.48
COL4A3BP-202ENST00000357457 CCNL1Q9UK58 526 aaPredicted RBP12.08□□□□□ -0.48
COL4A3BP-202ENST00000357457 RTL1A6NKG5 1358 aa12.07□□□□□ -0.48
COL4A3BP-202ENST00000357457 TONSLQ96HA7 1378 aa12.07□□□□□ -0.48
COL4A3BP-202ENST00000357457 COL23A1Q86Y22 540 aaPredicted RBP12.07□□□□□ -0.48
COL4A3BP-202ENST00000357457 NLGN2Q8NFZ4 835 aa12.07□□□□□ -0.48
COL4A3BP-202ENST00000357457 GRIN3BO60391 1043 aa12.06□□□□□ -0.48
COL4A3BP-202ENST00000357457 HMGB2P26583 209 aaKnown RBP12.06□□□□□ -0.48
COL4A3BP-202ENST00000357457 RRS1Q15050 365 aaKnown RBP12.06□□□□□ -0.48
COL4A3BP-202ENST00000357457 USP47Q96K76 1375 aa12.05□□□□□ -0.48
COL4A3BP-202ENST00000357457 SENP3-EIF4A1A0A087X0R7 540 aa12.05□□□□□ -0.48
COL4A3BP-202ENST00000357457 KLHL34Q8N239 644 aa12.05□□□□□ -0.48
COL4A3BP-202ENST00000357457 YBX3P16989 372 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL4A3BP-202ENST00000357457 RAPGEF4Q8WZA2 1011 aa12.04□□□□□ -0.48
COL4A3BP-202ENST00000357457 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
COL4A3BP-202ENST00000357457 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
COL4A3BP-202ENST00000357457 INSRP06213 1382 aa12.04□□□□□ -0.48
COL4A3BP-202ENST00000357457 KIF24Q5T7B8 1368 aa12.04□□□□□ -0.48
COL4A3BP-202ENST00000357457 GIGYF1O75420 1035 aaPredicted RBP12.03□□□□□ -0.48
COL4A3BP-202ENST00000357457 TATP17735 454 aaPredicted RBP12.03□□□□□ -0.48
COL4A3BP-202ENST00000357457 HSP90AB2PQ58FF8 381 aa12.03□□□□□ -0.48
COL4A3BP-202ENST00000357457 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
COL4A3BP-202ENST00000357457 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
COL4A3BP-202ENST00000357457 FLAD1Q8NFF5 587 aa12.03□□□□□ -0.48
COL4A3BP-202ENST00000357457 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
COL4A3BP-202ENST00000357457 CYP27B1O15528 508 aa12.02□□□□□ -0.49
COL4A3BP-202ENST00000357457 TMF1P82094 1093 aa12.02□□□□□ -0.49
COL4A3BP-202ENST00000357457 ITGB4P16144 1822 aa12.02□□□□□ -0.49
COL4A3BP-202ENST00000357457 C5P01031 1676 aa12.01□□□□□ -0.49
COL4A3BP-202ENST00000357457 NKX1-1Q15270 411 aaPredicted RBP12.01□□□□□ -0.49
COL4A3BP-202ENST00000357457 PCDH11XQ9BZA7 1347 aa12.01□□□□□ -0.49
COL4A3BP-202ENST00000357457 PCDH11YQ9BZA8 1340 aa12.01□□□□□ -0.49
COL4A3BP-202ENST00000357457 FLT4P35916 1363 aa12.01□□□□□ -0.49
COL4A3BP-202ENST00000357457 SMG6Q86US8 1419 aaKnown RBP12.01□□□□□ -0.49
COL4A3BP-202ENST00000357457 MPRIPQ6WCQ1 1025 aa12□□□□□ -0.49
COL4A3BP-202ENST00000357457 SMARCC1Q92922 1105 aaPredicted RBP12□□□□□ -0.49
COL4A3BP-202ENST00000357457 PALLDQ8WX93 1383 aa12□□□□□ -0.49
COL4A3BP-202ENST00000357457 MSL1Q68DK7 614 aa11.99□□□□□ -0.49
COL4A3BP-202ENST00000357457 NCAPD2Q15021 1401 aa11.99□□□□□ -0.49
COL4A3BP-202ENST00000357457 UBR3Q6ZT12 1888 aa11.98□□□□□ -0.49
COL4A3BP-202ENST00000357457 MAP2P11137 1827 aaKnown RBP11.98□□□□□ -0.49
COL4A3BP-202ENST00000357457 CDCA8Q53HL2 280 aa11.98□□□□□ -0.49
COL4A3BP-202ENST00000357457 PIGBQ92521 554 aa11.98□□□□□ -0.49
COL4A3BP-202ENST00000357457 CARD14Q9BXL6 1004 aa11.98□□□□□ -0.49
COL4A3BP-202ENST00000357457 KIF20BQ96Q89 1820 aa11.97□□□□□ -0.49
COL4A3BP-202ENST00000357457 C4BP0C0L5 1744 aa11.97□□□□□ -0.49
COL4A3BP-202ENST00000357457 TOGARAM1Q9Y4F4 1720 aa11.97□□□□□ -0.49
COL4A3BP-202ENST00000357457 AMIGO3Q86WK7 504 aa11.97□□□□□ -0.49
COL4A3BP-202ENST00000357457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.491e-6■■□□□ 11.9
COL4A3BP-202ENST00000357457 PKD1L3Q7Z443 1732 aa11.97□□□□□ -0.49
COL4A3BP-202ENST00000357457 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
COL4A3BP-202ENST00000357457 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
COL4A3BP-202ENST00000357457 ATP10DQ9P241 1426 aa11.95□□□□□ -0.5
COL4A3BP-202ENST00000357457 ADCY9O60503 1353 aa11.95□□□□□ -0.5
COL4A3BP-202ENST00000357457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.95□□□□□ -0.5
COL4A3BP-202ENST00000357457 SSFA2P28290 1259 aa11.95□□□□□ -0.5
COL4A3BP-202ENST00000357457 AK7Q96M32 723 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms