RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 R3HDM1Q15032 1099 aaKnown RBP23.46■■□□□ 1.35
NCL-202ENST00000356936 ACSBG1Q96GR2 724 aa23.46■■□□□ 1.35
NCL-202ENST00000356936 MAP2P11137 1827 aaKnown RBP23.45■■□□□ 1.34
NCL-202ENST00000356936 NHSQ6T4R5 1651 aa23.45■■□□□ 1.34
NCL-202ENST00000356936 KCNQ2O43526 872 aa23.45■■□□□ 1.34
NCL-202ENST00000356936 NUP188Q5SRE5 1749 aa23.43■■□□□ 1.34
NCL-202ENST00000356936 AMER1Q5JTC6 1135 aaPredicted RBP23.43■■□□□ 1.34
NCL-202ENST00000356936 NCAPD2Q15021 1401 aa23.42■■□□□ 1.34
NCL-202ENST00000356936 PCDH11XQ9BZA7 1347 aa23.41■■□□□ 1.34
NCL-202ENST00000356936 PCDH11YQ9BZA8 1340 aa23.41■■□□□ 1.34
NCL-202ENST00000356936 EYA1Q99502 592 aa23.41■■□□□ 1.34
NCL-202ENST00000356936 EIF4A2Q14240 407 aaKnown RBP23.4■■□□□ 1.34
NCL-202ENST00000356936 PER1O15534 1290 aaPredicted RBP23.39■■□□□ 1.33
NCL-202ENST00000356936 TXNRD1Q16881 649 aa23.39■■□□□ 1.33
NCL-202ENST00000356936 PROM2Q8N271 834 aa23.37■■□□□ 1.33
NCL-202ENST00000356936 SYTL4Q96C24 671 aaPredicted RBP23.37■■□□□ 1.33
NCL-202ENST00000356936 SPG7Q9UQ90 795 aa23.37■■□□□ 1.33
NCL-202ENST00000356936 SHANK3Q9BYB0 1731 aa23.36■■□□□ 1.33
NCL-202ENST00000356936 PRIM1P49642 420 aaKnown RBP23.36■■□□□ 1.33
NCL-202ENST00000356936 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.36■■□□□ 1.334e-17■■■■□ 20.7
NCL-202ENST00000356936 PLEKHG2Q9H7P9 1386 aa23.36■■□□□ 1.33
NCL-202ENST00000356936 NPC1L1Q9UHC9 1359 aa23.35■■□□□ 1.33
NCL-202ENST00000356936 IGSF1Q8N6C5 1336 aa23.33■■□□□ 1.33
NCL-202ENST00000356936 LRP5O75197 1615 aa23.33■■□□□ 1.33
NCL-202ENST00000356936 BTAF1O14981 1849 aa23.33■■□□□ 1.33
NCL-202ENST00000356936 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.33
NCL-202ENST00000356936 STK32BQ9NY57 414 aa23.32■■□□□ 1.32
NCL-202ENST00000356936 PKD1L3Q7Z443 1732 aa23.31■■□□□ 1.32
NCL-202ENST00000356936 DOT1LQ8TEK3 1739 aa23.31■■□□□ 1.32
NCL-202ENST00000356936 CYP27B1O15528 508 aa23.31■■□□□ 1.32
NCL-202ENST00000356936 SLC27A3Q5K4L6 730 aa23.31■■□□□ 1.32
NCL-202ENST00000356936 ANO8Q9HCE9 1232 aaPredicted RBP23.3■■□□□ 1.32
NCL-202ENST00000356936 MTHFSP49914 203 aa23.28■■□□□ 1.32
NCL-202ENST00000356936 NKX1-1Q15270 411 aaPredicted RBP23.28■■□□□ 1.32
NCL-202ENST00000356936 SLC15A2Q16348 729 aa23.27■■□□□ 1.32
NCL-202ENST00000356936 IFNL2Q8IZJ0 200 aa23.27■■□□□ 1.32
NCL-202ENST00000356936 SRCAPQ6ZRS2 3230 aa23.27■■□□□ 1.32
NCL-202ENST00000356936 KAT6BQ8WYB5 2073 aa23.25■■□□□ 1.31
NCL-202ENST00000356936 HMGB2P26583 209 aaKnown RBP23.25■■□□□ 1.31
NCL-202ENST00000356936 IL13P35225 146 aa23.25■■□□□ 1.31
NCL-202ENST00000356936 PHKG2P15735 406 aa23.24■■□□□ 1.31
NCL-202ENST00000356936 AMOTQ4VCS5 1084 aa23.24■■□□□ 1.31
NCL-202ENST00000356936 PLEKHO1Q53GL0 409 aaPredicted RBP23.24■■□□□ 1.31
NCL-202ENST00000356936 MPRIPQ6WCQ1 1025 aa23.23■■□□□ 1.31
NCL-202ENST00000356936 SPON1Q9HCB6 807 aa23.23■■□□□ 1.31
NCL-202ENST00000356936 LRRC4BQ9NT99 713 aa23.23■■□□□ 1.31
NCL-202ENST00000356936 SULT6B1Q6IMI4 303 aa23.22■■□□□ 1.31
NCL-202ENST00000356936 HSP90AB1P08238 724 aaKnown RBP23.21■■□□□ 1.31
NCL-202ENST00000356936 CNGB1Q14028 1251 aaPredicted RBP23.21■■□□□ 1.31
NCL-202ENST00000356936 SMARCC1Q92922 1105 aaPredicted RBP23.21■■□□□ 1.31
NCL-202ENST00000356936 KDRP35968 1356 aa23.21■■□□□ 1.31
NCL-202ENST00000356936 PAPPAQ13219 1627 aa23.21■■□□□ 1.31
NCL-202ENST00000356936 DIAPH1O60610 1272 aaKnown RBP23.2■■□□□ 1.3
NCL-202ENST00000356936 CCNL1Q9UK58 526 aaPredicted RBP23.2■■□□□ 1.3
NCL-202ENST00000356936 AEBP1Q8IUX7 1158 aa23.19■■□□□ 1.3
NCL-202ENST00000356936 TMOD3Q9NYL9 352 aa23.18■■□□□ 1.3
NCL-202ENST00000356936 LY75O60449 1722 aa23.18■■□□□ 1.3
NCL-202ENST00000356936 PALLDQ8WX93 1383 aa23.17■■□□□ 1.3
NCL-202ENST00000356936 C1orf141Q5JVX7 400 aa23.17■■□□□ 1.3
NCL-202ENST00000356936 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
NCL-202ENST00000356936 PIGBQ92521 554 aa23.17■■□□□ 1.3
NCL-202ENST00000356936 AKT1S1Q96B36 256 aa23.17■■□□□ 1.3
NCL-202ENST00000356936 DCAF5Q96JK2 942 aa23.17■■□□□ 1.3
NCL-202ENST00000356936 TOGARAM1Q9Y4F4 1720 aa23.16■■□□□ 1.3
NCL-202ENST00000356936 ZNF827Q17R98 1081 aa23.16■■□□□ 1.3
NCL-202ENST00000356936 CASZ1Q86V15 1759 aa23.16■■□□□ 1.3
NCL-202ENST00000356936 ERVV-2B6SEH9 535 aa23.14■■□□□ 1.29
NCL-202ENST00000356936 KCNQ4P56696 695 aa23.14■■□□□ 1.29
NCL-202ENST00000356936 CFAP53Q96M91 514 aa23.14■■□□□ 1.29
NCL-202ENST00000356936 PDGFDQ9GZP0 370 aaPredicted RBP23.14■■□□□ 1.29
NCL-202ENST00000356936 TFCP2L1Q9NZI6 479 aa23.14■■□□□ 1.29
NCL-202ENST00000356936 PPP1R1BQ9UD71 204 aaPredicted RBP23.14■■□□□ 1.29
NCL-202ENST00000356936 ZBTB7AO95365 584 aa23.13■■□□□ 1.29
NCL-202ENST00000356936 MTFR1LQ9H019 292 aa23.13■■□□□ 1.29
NCL-202ENST00000356936 ITGB4P16144 1822 aa23.12■■□□□ 1.29
NCL-202ENST00000356936 HMOX1P09601 288 aa23.11■■□□□ 1.29
NCL-202ENST00000356936 SLC16A10Q8TF71 515 aa23.1■■□□□ 1.29
NCL-202ENST00000356936 COL3A1P02461 1466 aaPredicted RBP23.1■■□□□ 1.29
NCL-202ENST00000356936 U2SURPO15042 1029 aaKnown RBP23.08■■□□□ 1.29
NCL-202ENST00000356936 CABP4P57796 275 aa23.08■■□□□ 1.29
NCL-202ENST00000356936 AKAP4Q5JQC9 854 aa23.08■■□□□ 1.29
NCL-202ENST00000356936 ASAP1Q9ULH1 1129 aa23.08■■□□□ 1.29
NCL-202ENST00000356936 ATF5Q9Y2D1 282 aaPredicted RBP23.08■■□□□ 1.29
NCL-202ENST00000356936 LOC102724428A0A0B4J2F2 783 aa23.07■■□□□ 1.28
NCL-202ENST00000356936 PPP2R1AP30153 589 aa23.07■■□□□ 1.28
NCL-202ENST00000356936 SIK1P57059 783 aa23.07■■□□□ 1.28
NCL-202ENST00000356936 NUDCQ9Y266 331 aa23.07■■□□□ 1.28
NCL-202ENST00000356936 QSER1Q2KHR3 1735 aa23.07■■□□□ 1.28
NCL-202ENST00000356936 KDM6AO15550 1401 aaPredicted RBP23.07■■□□□ 1.28
NCL-202ENST00000356936 PNPLA7Q6ZV29 1317 aa23.07■■□□□ 1.28
NCL-202ENST00000356936 ATG3Q9NT62 314 aa23.06■■□□□ 1.28
NCL-202ENST00000356936 PTGER2P43116 358 aa23.05■■□□□ 1.28
NCL-202ENST00000356936 C5P01031 1676 aa23.05■■□□□ 1.28
NCL-202ENST00000356936 FLAD1Q8NFF5 587 aa23.04■■□□□ 1.28
NCL-202ENST00000356936 AK7Q96M32 723 aa23.03■■□□□ 1.28
NCL-202ENST00000356936 ZEB1P37275 1124 aaPredicted RBP23.02■■□□□ 1.28
NCL-202ENST00000356936 ATP6V1AP38606 617 aa23.02■■□□□ 1.28
NCL-202ENST00000356936 MSH5O43196 834 aa23.01■■□□□ 1.27
NCL-202ENST00000356936 MTHFSDQ2M296 383 aaKnown RBP23.01■■□□□ 1.27
NCL-202ENST00000356936 NFATC2IPQ8NCF5 419 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms