RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 BTAF1O14981 1849 aa27.76■■■□□ 2.03
CHRD-203ENST00000356534 TATP17735 454 aaPredicted RBP27.75■■■□□ 2.03
CHRD-203ENST00000356534 BCL11BQ9C0K0 894 aaPredicted RBP27.75■■■□□ 2.03
CHRD-203ENST00000356534 PLEKHG2Q9H7P9 1386 aa27.73■■■□□ 2.03
CHRD-203ENST00000356534 USHBP1Q8N6Y0 703 aa27.73■■■□□ 2.03
CHRD-203ENST00000356534 ZCRB1Q8TBF4 217 aaKnown RBP27.73■■■□□ 2.03
CHRD-203ENST00000356534 CAMKK2Q96RR4 588 aa27.71■■■□□ 2.03
CHRD-203ENST00000356534 EZH2Q15910 746 aaKnown RBP27.69■■■□□ 2.02
CHRD-203ENST00000356534 PCDH11XQ9BZA7 1347 aa27.68■■■□□ 2.02
CHRD-203ENST00000356534 PCDH11YQ9BZA8 1340 aa27.68■■■□□ 2.02
CHRD-203ENST00000356534 PLSCR1O15162 318 aa27.68■■■□□ 2.02
CHRD-203ENST00000356534 EIF4A2Q14240 407 aaKnown RBP27.68■■■□□ 2.02
CHRD-203ENST00000356534 DDX54Q8TDD1 881 aaKnown RBP27.68■■■□□ 2.02
CHRD-203ENST00000356534 EYA1Q99502 592 aa27.67■■■□□ 2.02
CHRD-203ENST00000356534 ZEB1P37275 1124 aaPredicted RBP27.66■■■□□ 2.02
CHRD-203ENST00000356534 CC2D1BQ5T0F9 858 aaKnown RBP27.66■■■□□ 2.02
CHRD-203ENST00000356534 IGSF1Q8N6C5 1336 aa27.65■■■□□ 2.02
CHRD-203ENST00000356534 ITGB4P16144 1822 aa27.64■■■□□ 2.01
CHRD-203ENST00000356534 ACSBG1Q96GR2 724 aa27.62■■■□□ 2.01
CHRD-203ENST00000356534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.61■■■□□ 2.01
CHRD-203ENST00000356534 SPG7Q9UQ90 795 aa27.61■■■□□ 2.01
CHRD-203ENST00000356534 NBPF14Q5TI25 921 aa27.59■■■□□ 2.01
CHRD-203ENST00000356534 LY75O60449 1722 aa27.58■■■□□ 2.01
CHRD-203ENST00000356534 MTHFSP49914 203 aa27.58■■■□□ 2.01
CHRD-203ENST00000356534 TOGARAM1Q9Y4F4 1720 aa27.58■■■□□ 2.01
CHRD-203ENST00000356534 KCNQ2O43526 872 aa27.57■■■□□ 2
CHRD-203ENST00000356534 PTF1AQ7RTS3 328 aa27.56■■■□□ 2
CHRD-203ENST00000356534 VIRMAQ69YN4 1812 aaKnown RBP27.53■■■□□ 2
CHRD-203ENST00000356534 LRP5O75197 1615 aa27.53■■■□□ 2
CHRD-203ENST00000356534 KDRP35968 1356 aa27.53■■■□□ 2
CHRD-203ENST00000356534 SYTL4Q96C24 671 aaPredicted RBP27.53■■■□□ 2
CHRD-203ENST00000356534 IL13P35225 146 aa27.52■■■□□ 2
CHRD-203ENST00000356534 CYP27B1O15528 508 aa27.51■■□□□ 1.99
CHRD-203ENST00000356534 PRIM1P49642 420 aaKnown RBP27.5■■□□□ 1.99
CHRD-203ENST00000356534 CNGB1Q14028 1251 aaPredicted RBP27.5■■□□□ 1.99
CHRD-203ENST00000356534 TXNRD1Q16881 649 aa27.5■■□□□ 1.99
CHRD-203ENST00000356534 IFNL2Q8IZJ0 200 aa27.5■■□□□ 1.99
CHRD-203ENST00000356534 COL3A1P02461 1466 aaPredicted RBP27.5■■□□□ 1.99
CHRD-203ENST00000356534 PAPPAQ13219 1627 aa27.49■■□□□ 1.99
CHRD-203ENST00000356534 DIAPH1O60610 1272 aaKnown RBP27.49■■□□□ 1.99
CHRD-203ENST00000356534 AMOTQ4VCS5 1084 aa27.49■■□□□ 1.99
CHRD-203ENST00000356534 PLEKHO1Q53GL0 409 aaPredicted RBP27.49■■□□□ 1.99
CHRD-203ENST00000356534 PSDA5PKW4 1024 aaPredicted RBP27.48■■□□□ 1.99
CHRD-203ENST00000356534 R3HDM1Q15032 1099 aaKnown RBP27.48■■□□□ 1.99
CHRD-203ENST00000356534 NKX1-1Q15270 411 aaPredicted RBP27.48■■□□□ 1.99
CHRD-203ENST00000356534 CFAP53Q96M91 514 aa27.48■■□□□ 1.99
CHRD-203ENST00000356534 QSER1Q2KHR3 1735 aa27.47■■□□□ 1.99
CHRD-203ENST00000356534 SULT6B1Q6IMI4 303 aa27.47■■□□□ 1.99
CHRD-203ENST00000356534 HSP90AB1P08238 724 aaKnown RBP27.46■■□□□ 1.99
CHRD-203ENST00000356534 SCN11AQ9UI33 1791 aa27.45■■□□□ 1.99
CHRD-203ENST00000356534 PHKG2P15735 406 aa27.45■■□□□ 1.98
CHRD-203ENST00000356534 SLC27A3Q5K4L6 730 aa27.45■■□□□ 1.98
CHRD-203ENST00000356534 TAF1LQ8IZX4 1826 aa27.44■■□□□ 1.98
CHRD-203ENST00000356534 HMGB2P26583 209 aaKnown RBP27.44■■□□□ 1.98
CHRD-203ENST00000356534 PROM2Q8N271 834 aa27.44■■□□□ 1.98
CHRD-203ENST00000356534 AEBP1Q8IUX7 1158 aa27.43■■□□□ 1.98
CHRD-203ENST00000356534 CASZ1Q86V15 1759 aa27.43■■□□□ 1.98
CHRD-203ENST00000356534 STK32BQ9NY57 414 aa27.42■■□□□ 1.98
CHRD-203ENST00000356534 C5P01031 1676 aa27.42■■□□□ 1.98
CHRD-203ENST00000356534 ZNF530Q6P9A1 599 aaPredicted RBP27.41■■□□□ 1.98
CHRD-203ENST00000356534 C1orf141Q5JVX7 400 aa27.4■■□□□ 1.98
CHRD-203ENST00000356534 PPP2R1AP30153 589 aa27.39■■□□□ 1.98
CHRD-203ENST00000356534 SMARCC1Q92922 1105 aaPredicted RBP27.39■■□□□ 1.98
CHRD-203ENST00000356534 TUBGCP6Q96RT7 1819 aa27.39■■□□□ 1.97
CHRD-203ENST00000356534 MPRIPQ6WCQ1 1025 aa27.38■■□□□ 1.97
CHRD-203ENST00000356534 DCAF5Q96JK2 942 aa27.38■■□□□ 1.97
CHRD-203ENST00000356534 ANO8Q9HCE9 1232 aaPredicted RBP27.38■■□□□ 1.97
CHRD-203ENST00000356534 TMOD3Q9NYL9 352 aa27.37■■□□□ 1.97
CHRD-203ENST00000356534 NUDCQ9Y266 331 aa27.37■■□□□ 1.97
CHRD-203ENST00000356534 PALLDQ8WX93 1383 aa27.35■■□□□ 1.97
CHRD-203ENST00000356534 U2SURPO15042 1029 aaKnown RBP27.35■■□□□ 1.97
CHRD-203ENST00000356534 HMOX1P09601 288 aa27.35■■□□□ 1.97
CHRD-203ENST00000356534 SLC15A2Q16348 729 aa27.35■■□□□ 1.97
CHRD-203ENST00000356534 ERVV-2B6SEH9 535 aa27.34■■□□□ 1.97
CHRD-203ENST00000356534 ZNF831Q5JPB2 1677 aa27.33■■□□□ 1.97
CHRD-203ENST00000356534 DDX10Q13206 875 aaKnown RBP27.33■■□□□ 1.97
CHRD-203ENST00000356534 CCNL1Q9UK58 526 aaPredicted RBP27.33■■□□□ 1.97
CHRD-203ENST00000356534 KDM6AO15550 1401 aaPredicted RBP27.33■■□□□ 1.96
CHRD-203ENST00000356534 ADAMTS7Q9UKP4 1686 aa27.32■■□□□ 1.96
CHRD-203ENST00000356534 RALBP1Q15311 655 aa27.31■■□□□ 1.96
CHRD-203ENST00000356534 AKAP4Q5JQC9 854 aa27.31■■□□□ 1.96
CHRD-203ENST00000356534 PIGBQ92521 554 aa27.31■■□□□ 1.96
CHRD-203ENST00000356534 LRRC4BQ9NT99 713 aa27.31■■□□□ 1.96
CHRD-203ENST00000356534 C4BP0C0L5 1744 aa27.27■■□□□ 1.96
CHRD-203ENST00000356534 MRC1P22897 1456 aa27.26■■□□□ 1.95
CHRD-203ENST00000356534 CABP4P57796 275 aa27.26■■□□□ 1.95
CHRD-203ENST00000356534 GAS2L2Q8NHY3 880 aa27.26■■□□□ 1.95
CHRD-203ENST00000356534 SPON1Q9HCB6 807 aa27.25■■□□□ 1.95
CHRD-203ENST00000356534 UBR3Q6ZT12 1888 aa27.25■■□□□ 1.95
CHRD-203ENST00000356534 AKT1S1Q96B36 256 aa27.24■■□□□ 1.95
CHRD-203ENST00000356534 SRCAPQ6ZRS2 3230 aa27.24■■□□□ 1.95
CHRD-203ENST00000356534 ZNF827Q17R98 1081 aa27.23■■□□□ 1.95
CHRD-203ENST00000356534 CICQ96RK0 1608 aaPredicted RBP27.23■■□□□ 1.95
CHRD-203ENST00000356534 COL5A3P25940 1745 aaPredicted RBP27.22■■□□□ 1.95
CHRD-203ENST00000356534 U2AF1L5P0DN76 240 aaPredicted RBP27.22■■□□□ 1.95
CHRD-203ENST00000356534 U2AF1Q01081 240 aaKnown RBP eCLIP27.22■■□□□ 1.95
CHRD-203ENST00000356534 MTHFSDQ2M296 383 aaKnown RBP27.21■■□□□ 1.95
CHRD-203ENST00000356534 SIPA1L3O60292 1781 aaPredicted RBP27.21■■□□□ 1.95
CHRD-203ENST00000356534 COL24A1Q17RW2 1714 aa27.21■■□□□ 1.95
CHRD-203ENST00000356534 LOC102724428A0A0B4J2F2 783 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms