RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 PRAM1Q96QH2 718 aa15.81■□□□□ 0.12
LMBR1-201ENST00000353442 VAT1LQ9HCJ6 419 aa15.8■□□□□ 0.12
LMBR1-201ENST00000353442 TAF4BQ92750 862 aa15.8■□□□□ 0.12
LMBR1-201ENST00000353442 MMRN2Q9H8L6 949 aa15.8■□□□□ 0.12
LMBR1-201ENST00000353442 CAVIN4Q5BKX8 364 aa15.8■□□□□ 0.12
LMBR1-201ENST00000353442 CTNNA2P26232 953 aa15.8■□□□□ 0.12
LMBR1-201ENST00000353442 CCDC91Q7Z6B0 441 aa15.8■□□□□ 0.12
LMBR1-201ENST00000353442 KIF20AO95235 890 aa15.79■□□□□ 0.12
LMBR1-201ENST00000353442 KIAA0754O94854 1291 aa15.79■□□□□ 0.12
LMBR1-201ENST00000353442 RGS22Q8NE09 1264 aa15.79■□□□□ 0.12
LMBR1-201ENST00000353442 JMYQ8N9B5 988 aa15.79■□□□□ 0.12
LMBR1-201ENST00000353442 DDX11Q96FC9 970 aa15.79■□□□□ 0.12
LMBR1-201ENST00000353442 DACH1Q9UI36 760 aa15.79■□□□□ 0.12
LMBR1-201ENST00000353442 CYP46A1Q9Y6A2 500 aa15.79■□□□□ 0.12
LMBR1-201ENST00000353442 SMC1AQ14683 1233 aaKnown RBP15.79■□□□□ 0.12
LMBR1-201ENST00000353442 USP8P40818 1118 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 TWISTNBQ3B726 338 aaPredicted RBP15.78■□□□□ 0.12
LMBR1-201ENST00000353442 CWC27Q6UX04 472 aaKnown RBP15.78■□□□□ 0.12
LMBR1-201ENST00000353442 DYDC1Q8WWB3 177 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 TSPY26PQ9H489 355 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 SSX2IPQ9Y2D8 614 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 CEP126Q9P2H0 1117 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 GSTTP1A0A1W2PQM5 241 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 CEP63Q96MT8 703 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 CWC15Q9P013 229 aaKnown RBP15.78■□□□□ 0.12
LMBR1-201ENST00000353442 CCDC178Q5BJE1 867 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 TMX1Q9H3N1 280 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 BCAR3O75815 825 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 STAMBPO95630 424 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 TNMDQ9H2S6 317 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 TMOD3Q9NYL9 352 aa15.78■□□□□ 0.12
LMBR1-201ENST00000353442 PPP1R12BO60237 982 aaPredicted RBP15.77■□□□□ 0.12
LMBR1-201ENST00000353442 STARD3NLO95772 234 aa15.77■□□□□ 0.12
LMBR1-201ENST00000353442 DDX23Q9BUQ8 820 aaKnown RBP15.77■□□□□ 0.12
LMBR1-201ENST00000353442 RANBP6O60518 1105 aaKnown RBP15.77■□□□□ 0.12
LMBR1-201ENST00000353442 RBM26Q5T8P6 1007 aaKnown RBP15.77■□□□□ 0.12
LMBR1-201ENST00000353442 ZNF652Q9Y2D9 606 aa15.77■□□□□ 0.12
LMBR1-201ENST00000353442 CCDC39Q9UFE4 941 aa15.77■□□□□ 0.12
LMBR1-201ENST00000353442 GOLGA6L7A0A1B0GV03 622 aa15.77■□□□□ 0.11
LMBR1-201ENST00000353442 ZNF444Q8N0Y2 327 aaPredicted RBP15.77■□□□□ 0.11
LMBR1-201ENST00000353442 FAM43AQ8N2R8 423 aa15.77■□□□□ 0.11
LMBR1-201ENST00000353442 USP47Q96K76 1375 aa15.77■□□□□ 0.11
LMBR1-201ENST00000353442 NASPP49321 788 aaPredicted RBP15.77■□□□□ 0.11
LMBR1-201ENST00000353442 LARP1Q6PKG0 1096 aaKnown RBP15.77■□□□□ 0.11
LMBR1-201ENST00000353442 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.77■□□□□ 0.11
LMBR1-201ENST00000353442 CETN2P41208 172 aa15.76■□□□□ 0.11
LMBR1-201ENST00000353442 BCCIPQ9P287 314 aaKnown RBP eCLIP15.76■□□□□ 0.11
LMBR1-201ENST00000353442 KLHL10Q6JEL2 608 aa15.76■□□□□ 0.11
LMBR1-201ENST00000353442 TSR2Q969E8 191 aaKnown RBP15.76■□□□□ 0.11
LMBR1-201ENST00000353442 NOB1Q9ULX3 412 aaKnown RBP15.76■□□□□ 0.11
LMBR1-201ENST00000353442 RRS1Q15050 365 aaKnown RBP15.76■□□□□ 0.11
LMBR1-201ENST00000353442 LRSAM1Q6UWE0 723 aa15.76■□□□□ 0.11
LMBR1-201ENST00000353442 MAP2K1Q02750 393 aaPredicted RBP15.76■□□□□ 0.11
LMBR1-201ENST00000353442 EP400NLQ6ZTU2 488 aa15.76■□□□□ 0.11
LMBR1-201ENST00000353442 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.76■□□□□ 0.11
LMBR1-201ENST00000353442 IL1RAPL2Q9NP60 686 aa15.76■□□□□ 0.11
LMBR1-201ENST00000353442 MIS18AQ9NYP9 233 aa15.76■□□□□ 0.11
LMBR1-201ENST00000353442 LMAN1P49257 510 aa15.76■□□□□ 0.11
LMBR1-201ENST00000353442 STAC3Q96MF2 364 aa15.75■□□□□ 0.11
LMBR1-201ENST00000353442 RABEP1Q15276 862 aa15.75■□□□□ 0.11
LMBR1-201ENST00000353442 DPH6Q7L8W6 267 aa15.75■□□□□ 0.11
LMBR1-201ENST00000353442 EXOSC9Q06265 439 aaKnown RBP15.75■□□□□ 0.11
LMBR1-201ENST00000353442 CKAP2LQ8IYA6 745 aa15.75■□□□□ 0.11
LMBR1-201ENST00000353442 PLS1Q14651 629 aa15.75■□□□□ 0.11
LMBR1-201ENST00000353442 F8W031 263 aaPredicted RBP15.74■□□□□ 0.11
LMBR1-201ENST00000353442 ANKLE2Q86XL3 938 aa15.74■□□□□ 0.11
LMBR1-201ENST00000353442 OTUD6BQ8N6M0 293 aa15.74■□□□□ 0.11
LMBR1-201ENST00000353442 BICD1Q96G01 975 aa15.74■□□□□ 0.11
LMBR1-201ENST00000353442 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
LMBR1-201ENST00000353442 CFAP45Q9UL16 551 aa15.74■□□□□ 0.11
LMBR1-201ENST00000353442 USHBP1Q8N6Y0 703 aa15.74■□□□□ 0.11
LMBR1-201ENST00000353442 RBM10P98175 930 aaKnown RBP15.73■□□□□ 0.11
LMBR1-201ENST00000353442 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
LMBR1-201ENST00000353442 CDK19Q9BWU1 502 aa15.73■□□□□ 0.11
LMBR1-201ENST00000353442 GPTP24298 496 aa15.73■□□□□ 0.11
LMBR1-201ENST00000353442 RSPH6AQ9H0K4 717 aa15.73■□□□□ 0.11
LMBR1-201ENST00000353442 LRRCC1Q9C099 1032 aa15.73■□□□□ 0.11
LMBR1-201ENST00000353442 CCP110O43303 1012 aa15.73■□□□□ 0.11
LMBR1-201ENST00000353442 LARP1BQ659C4 914 aaKnown RBP15.73■□□□□ 0.11
LMBR1-201ENST00000353442 SRCIN1Q9C0H9 1055 aa15.73■□□□□ 0.11
LMBR1-201ENST00000353442 TERF1P54274 439 aa15.73■□□□□ 0.11
LMBR1-201ENST00000353442 JAKMIP1Q96N16 626 aaKnown RBP15.72■□□□□ 0.11
LMBR1-201ENST00000353442 CACNA2D4Q7Z3S7 1137 aa15.72■□□□□ 0.11
LMBR1-201ENST00000353442 CCDC102AQ96A19 550 aa15.72■□□□□ 0.11
LMBR1-201ENST00000353442 HOOK3Q86VS8 718 aa15.72■□□□□ 0.11
LMBR1-201ENST00000353442 NUTM1Q86Y26 1132 aa15.72■□□□□ 0.11
LMBR1-201ENST00000353442 TXLNBQ8N3L3 684 aa15.72■□□□□ 0.11
LMBR1-201ENST00000353442 SRGAP3O43295 1099 aa15.72■□□□□ 0.11
LMBR1-201ENST00000353442 GUCY1B3Q02153 619 aa15.72■□□□□ 0.11
LMBR1-201ENST00000353442 INCENPQ9NQS7 918 aa15.72■□□□□ 0.11
LMBR1-201ENST00000353442 PDCP20941 246 aa15.71■□□□□ 0.11
LMBR1-201ENST00000353442 TAF12Q16514 161 aa15.71■□□□□ 0.11
LMBR1-201ENST00000353442 TSG101Q99816 390 aa15.71■□□□□ 0.11
LMBR1-201ENST00000353442 MYD88Q99836 296 aa15.71■□□□□ 0.11
LMBR1-201ENST00000353442 ZNF397Q8NF99 534 aaPredicted RBP15.71■□□□□ 0.11
LMBR1-201ENST00000353442 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.71■□□□□ 0.11
LMBR1-201ENST00000353442 TMCO5BA8MYB1 307 aa15.71■□□□□ 0.11
LMBR1-201ENST00000353442 CDKL5O76039 1030 aa15.71■□□□□ 0.1
LMBR1-201ENST00000353442 LETM1O95202 739 aaPredicted RBP15.71■□□□□ 0.1
LMBR1-201ENST00000353442 ATP2B3Q16720 1220 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms